Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g007550 Solanum pennellii HOM05D000312 ORTHO05D011153 4.0e-90 334.7 166 100.0
Sopen05g006560 Solanum pennellii HOM05D000312 ORTHO05D000221 4.6e-38 161.8 102 81.4
CAN.G677.9 Capsicum annuum HOM05D000312 ORTHO05D000221 1.2e-33 147.1 105 70.5
CAN.G677.3 Capsicum annuum HOM05D000312 ORTHO05D000221 7.6e-33 144.4 107 71.0
CAN.G677.4 Capsicum annuum HOM05D000312 ORTHO05D000221 3.8e-32 142.1 99 72.7
CAN.G680.3 Capsicum annuum HOM05D000312 ORTHO05D020289 1.4e-31 140.2 105 68.6
Nitab4.5_0000027g0360 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.9e-30 134.4 98 70.4
CAN.G125.25 Capsicum annuum HOM05D000312 ORTHO05D011153 1.0e-29 134.0 111 65.8
CAN.G680.4 Capsicum annuum HOM05D000312 ORTHO05D011153 1.3e-29 133.7 118 62.7
PGSC0003DMG400019655 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.3e-29 133.7 87 77.0
CAN.G677.13 Capsicum annuum HOM05D000312 ORTHO05D020289 1.1e-26 124.0 99 63.6
Peaxi162Scf00179g00919 Petunia axillaris HOM05D000312 ORTHO05D000221 1.7e-24 116.7 99 61.6
Nitab4.5_0008981g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.9e-24 115.9 91 67.0
Nitab4.5_0000742g0240 Nicotiana tabacum HOM05D000312 ORTHO05D011153 3.8e-24 115.5 96 63.5
Peaxi162Scf00179g00095 Petunia axillaris HOM05D000312 ORTHO05D000221 2.7e-22 109.4 99 58.6
Nitab4.5_0001577g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.9e-21 105.5 89 64.0
Nitab4.5_0002312g0130 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.3e-20 102.1 77 67.5
Peaxi162Scf00685g00013 Petunia axillaris HOM05D000312 ORTHO05D000221 1.4e-18 97.1 87 62.1
Nitab4.5_0000027g0310 Nicotiana tabacum HOM05D000312 ORTHO05D000221 6.9e-18 94.7 87 60.9
Nitab4.5_0000027g0350 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.2e-17 94.0 69 69.6
CAN.G97.1 Capsicum annuum HOM05D000312 ORTHO05D011153 1.3e-16 90.5 76 63.2
Nitab4.5_0014640g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 9.4e-15 84.3 91 57.1
Sopen11g006420 Solanum pennellii HOM05D000312 ORTHO05D000221 2.1e-14 83.2 78 53.8
Nitab4.5_0015989g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.6e-14 82.4 124 43.5
CAN.G222.77 Capsicum annuum HOM05D000312 ORTHO05D000221 7.9e-14 81.3 119 46.2
Nitab4.5_0001438g0160 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.0e-13 79.3 84 51.2
Nitab4.5_0000259g0210 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.9e-13 79.0 89 52.8
Nitab4.5_0008587g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.1e-12 77.4 85 52.9
Peaxi162Scf00179g00710 Petunia axillaris HOM05D000312 ORTHO05D000221 1.1e-12 77.4 84 57.1
Nitab4.5_0000027g0280 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.5e-12 77.0 84 53.6
Nitab4.5_0000021g0680 Nicotiana tabacum HOM05D000312 ORTHO05D020289 2.0e-12 76.6 137 43.1
Nitab4.5_0001438g0180 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.0e-12 76.6 91 48.4
Peaxi162Scf00610g00013 Petunia axillaris HOM05D000312 ORTHO05D000221 2.0e-12 76.6 83 51.8
Peaxi162Scf00980g00132 Petunia axillaris HOM05D000312 ORTHO05D000221 2.0e-12 76.6 91 50.5
Nitab4.5_0013991g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.3e-12 75.9 76 53.9
Peaxi162Scf00179g00627 Petunia axillaris HOM05D000312 ORTHO05D000221 3.3e-12 75.9 79 55.7
PGSC0003DMG404013246 Solanum tuberosum HOM05D000312 ORTHO05D000221 3.3e-12 75.9 78 51.3
Sopen11g006340 Solanum pennellii HOM05D000312 ORTHO05D000221 5.7e-12 75.1 85 47.1
Peaxi162Scf00618g00745 Petunia axillaris HOM05D000312 ORTHO05D000221 9.7e-12 74.3 93 49.5
PGSC0003DMG400017452 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.7e-11 73.6 90 48.9
CAN.G222.75 Capsicum annuum HOM05D000312 ORTHO05D000221 2.2e-11 73.2 93 50.5
Peaxi162Scf00124g01420 Petunia axillaris HOM05D000312 ORTHO05D000221 3.7e-11 72.4 81 53.1
Nitab4.5_0000259g0190 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.8e-11 72.0 106 45.3
Peaxi162Scf00179g00625 Petunia axillaris HOM05D000312 ORTHO05D000221 6.3e-11 71.6 83 49.4
Peaxi162Scf00618g00630 Petunia axillaris HOM05D000312 ORTHO05D000221 6.3e-11 71.6 93 48.4
PGSC0003DMG400025113 Solanum tuberosum HOM05D000312 ORTHO05D011153 6.3e-11 71.6 76 48.7
CAN.G628.18 Capsicum annuum HOM05D000312 ORTHO05D000221 1.1e-10 70.9 88 46.6
Nitab4.5_0008587g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.1e-10 70.9 77 53.2
CAN.G224.10 Capsicum annuum HOM05D000312 ORTHO05D000221 1.4e-10 70.5 88 48.9
Nitab4.5_0004688g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.8e-10 70.1 57 66.7
Peaxi162Scf00179g00815 Petunia axillaris HOM05D000312 ORTHO05D000221 2.4e-10 69.7 155 37.4
PGSC0003DMG400025095 Solanum tuberosum HOM05D000312 ORTHO05D000221 2.4e-10 69.7 81 49.4
PGSC0003DMG403013245 Solanum tuberosum HOM05D000312 ORTHO05D000221 2.4e-10 69.7 97 43.3
Peaxi162Scf00179g00715 Petunia axillaris HOM05D000312 ORTHO05D000221 3.1e-10 69.3 78 47.4
PGSC0003DMG400020354 Solanum tuberosum HOM05D000312 ORTHO05D000221 3.1e-10 69.3 101 45.5
Nitab4.5_0000027g0320 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.1e-10 68.9 80 53.8
Nitab4.5_0004730g0050 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.1e-10 68.9 84 44.0
Peaxi162Scf00124g00168 Petunia axillaris HOM05D000312 ORTHO05D000221 4.1e-10 68.9 117 39.3
Sopen04g020370 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-10 68.9 76 51.3
Nitab4.5_0000742g0230 Nicotiana tabacum HOM05D000312 ORTHO05D000221 5.3e-10 68.6 63 58.7
Nitab4.5_0003071g0050 Nicotiana tabacum HOM05D000312 ORTHO05D000221 5.3e-10 68.6 79 50.6
Nitab4.5_0007853g0060 Nicotiana tabacum HOM05D000312 ORTHO05D000221 5.3e-10 68.6 83 47.0
CAN.G222.74 Capsicum annuum HOM05D000312 ORTHO05D020289 6.9e-10 68.2 88 51.1
Peaxi162Scf00124g01738 Petunia axillaris HOM05D000312 ORTHO05D000221 6.9e-10 68.2 91 45.1
Peaxi162Scf00610g00001 Petunia axillaris HOM05D000312 ORTHO05D000221 6.9e-10 68.2 93 48.4
Nitab4.5_0002548g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 9.1e-10 67.8 81 43.2
CAN.G184.25 Capsicum annuum HOM05D000312 ORTHO05D000221 1.2e-09 67.4 85 47.1
Nitab4.5_0006160g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.2e-09 67.4 87 49.4
PGSC0003DMG400001242 Solanum tuberosum HOM05D000312 ORTHO05D011153 1.2e-09 67.4 87 46.0
PGSC0003DMG402013246 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.2e-09 67.4 91 42.9
CAN.G184.26 Capsicum annuum HOM05D000312 ORTHO05D000221 1.5e-09 67.0 78 50.0
CAN.G184.29 Capsicum annuum HOM05D000312 ORTHO05D000221 1.5e-09 67.0 71 50.7
CAN.G184.31 Capsicum annuum HOM05D000312 ORTHO05D000221 1.5e-09 67.0 73 52.1
Nitab4.5_0005124g0040 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.5e-09 67.0 87 48.3
Sopen05g006150 Solanum pennellii HOM05D000312 ORTHO05D000221 1.5e-09 67.0 80 48.8
Sopen11g006400 Solanum pennellii HOM05D000312 ORTHO05D000221 1.5e-09 67.0 88 40.9
PGSC0003DMG400025093 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.5e-09 67.0 80 47.5
Nitab4.5_0001438g0190 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.0e-09 66.6 82 48.8
Sopen05g006130 Solanum pennellii HOM05D000312 ORTHO05D000221 2.6e-09 66.2 81 48.1
CAN.G1338.2 Capsicum annuum HOM05D000312 ORTHO05D000221 3.4e-09 65.9 96 43.8
CAN.G184.21 Capsicum annuum HOM05D000312 ORTHO05D011153 3.4e-09 65.9 78 50.0
Peaxi162Scf00124g01514 Petunia axillaris HOM05D000312 ORTHO05D000221 3.4e-09 65.9 92 48.9
Nitab4.5_0008981g0040 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.5e-09 65.5 85 48.2
PGSC0003DMG400025115 Solanum tuberosum HOM05D000312 ORTHO05D011153 4.5e-09 65.5 77 50.6
PGSC0003DMG400045388 Solanum tuberosum HOM05D000312 ORTHO05D011153 4.5e-09 65.5 76 51.3
Hma1.2p1_0189F.1_g082900 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 5.9e-09 65.1 84 44.0
Nitab4.5_0006592g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 5.9e-09 65.1 83 48.2
Peaxi162Scf00120g00155 Petunia axillaris HOM05D000312 ORTHO05D000221 5.9e-09 65.1 90 45.6
Nitab4.5_0004801g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.7e-09 64.7 83 45.8
Peaxi162Scf00618g00746 Petunia axillaris HOM05D000312 ORTHO05D000221 7.7e-09 64.7 91 46.2
PGSC0003DMG400045747 Solanum tuberosum HOM05D000312 ORTHO05D000221 7.7e-09 64.7 86 44.2
Peaxi162Scf00179g00816 Petunia axillaris HOM05D000312 ORTHO05D000221 1.0e-08 64.3 75 52.0
Peaxi162Scf00179g01014 Petunia axillaris HOM05D000312 ORTHO05D000221 1.0e-08 64.3 88 46.6
Nitab4.5_0000712g0200 Nicotiana tabacum HOM05D000312 ORTHO05D011153 1.3e-08 63.9 81 50.6
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 1.3e-08 63.9 93 41.9
PGSC0003DMG401013245 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.3e-08 63.9 81 45.7
CSS0021406 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 1.7e-08 63.5 103 41.7
Sopen11g006360 Solanum pennellii HOM05D000312 ORTHO05D000221 1.7e-08 63.5 81 46.9
PGSC0003DMG400025114 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.7e-08 63.5 77 50.6
CAN.G1352.2 Capsicum annuum HOM05D000312 ORTHO05D000221 2.2e-08 63.2 80 46.2
Peaxi162Scf00188g00541 Petunia axillaris HOM05D000312 ORTHO05D000221 2.2e-08 63.2 76 50.0
Peaxi162Scf00980g00130 Petunia axillaris HOM05D000312 ORTHO05D000221 2.2e-08 63.2 77 46.8
Sopen05g006190 Solanum pennellii HOM05D000312 ORTHO05D011153 2.2e-08 63.2 76 48.7
Dinv27407 Davidia involucrata HOM05D000312 ORTHO05D000221 2.9e-08 62.8 93 43.0
CAN.G184.28 Capsicum annuum HOM05D000312 ORTHO05D000221 3.8e-08 62.4 78 50.0
Nitab4.5_0001650g0060 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.8e-08 62.4 87 47.1
Nitab4.5_0007853g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.8e-08 62.4 82 47.6
Peaxi162Scf00188g00542 Petunia axillaris HOM05D000312 ORTHO05D000221 5.0e-08 62.0 65 53.8
Sopen11g009210 Solanum pennellii HOM05D000312 ORTHO05D011153 5.0e-08 62.0 79 45.6
CSS0044173 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 6.5e-08 61.6 103 40.8
Sopen00g010120 Solanum pennellii HOM05D000312 ORTHO05D011153 6.5e-08 61.6 87 43.7
PGSC0003DMG400013311 Solanum tuberosum HOM05D000312 ORTHO05D000221 6.5e-08 61.6 73 53.4
Actinidia19893 Actinidia chinensis HOM05D000312 ORTHO05D000221 8.5e-08 61.2 85 45.9
Actinidia24036 Actinidia chinensis HOM05D000312 ORTHO05D000221 8.5e-08 61.2 85 45.9
Nitab4.5_0012307g0010 Nicotiana tabacum HOM05D000312 ORTHO05D011153 8.5e-08 61.2 76 47.4
Peaxi162Scf00121g00314 Petunia axillaris HOM05D000312 ORTHO05D000221 8.5e-08 61.2 147 33.3
Actinidia31916 Actinidia chinensis HOM05D000312 ORTHO05D000221 1.1e-07 60.8 85 43.5
Nitab4.5_0010778g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.1e-07 60.8 75 49.3
Peaxi162Scf00012g00249 Petunia axillaris HOM05D000312 ORTHO05D000221 1.1e-07 60.8 82 43.9
Sopen05g006140 Solanum pennellii HOM05D000312 ORTHO05D000221 1.4e-07 60.5 77 48.1
arahy.Tifrunner.gnm1.ann1.9A2SBW Arachis hypogaea HOM05D000312 ORTHO05D000221 1.9e-07 60.1 149 28.9
Peaxi162Scf00124g01418 Petunia axillaris HOM05D000312 ORTHO05D000221 1.9e-07 60.1 90 45.6
Nitab4.5_0000249g0280 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.5e-07 59.7 71 52.1
arahy.Tifrunner.gnm1.ann1.UPJN51 Arachis hypogaea HOM05D000312 ORTHO05D000221 3.2e-07 59.3 149 28.9
CAN.G222.72 Capsicum annuum HOM05D000312 ORTHO05D000221 3.2e-07 59.3 82 50.0
Hma1.2p1_0189F.1_g082790 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 3.2e-07 59.3 94 37.2
Hma1.2p1_0189F.1_g082810 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 3.2e-07 59.3 130 30.0
Sopen05g006160 Solanum pennellii HOM05D000312 ORTHO05D011153 3.2e-07 59.3 76 46.1
Glyma.01G072000 Glycine max HOM05D000312 ORTHO05D000221 4.2e-07 58.9 115 33.0
Peaxi162Scf00124g01735 Petunia axillaris HOM05D000312 ORTHO05D000221 4.2e-07 58.9 52 57.7
CAN.G1352.9 Capsicum annuum HOM05D000312 ORTHO05D000221 7.2e-07 58.2 101 41.6
Nitab4.5_0009122g0020 Nicotiana tabacum HOM05D000312 ORTHO05D020289 7.2e-07 58.2 78 44.9
CAN.G1352.6 Capsicum annuum HOM05D000312 ORTHO05D011153 9.4e-07 57.8 101 40.6
CAN.G483.11 Capsicum annuum HOM05D000312 ORTHO05D000221 9.4e-07 57.8 72 48.6
Dinv16567 Davidia involucrata HOM05D000312 ORTHO05D000221 1.2e-06 57.4 99 39.4
Sopen04g019510 Solanum pennellii HOM05D000312 ORTHO05D011153 1.6e-06 57.0 76 44.7
Sopen11g006320 Solanum pennellii HOM05D000312 ORTHO05D000221 1.6e-06 57.0 96 39.6
CAN.G803.5 Capsicum annuum HOM05D000312 ORTHO05D000221 2.1e-06 56.6 91 36.3
CAN.G865.4 Capsicum annuum HOM05D000312 ORTHO05D011153 2.1e-06 56.6 127 32.3
Nitab4.5_0006160g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.1e-06 56.6 71 47.9
Peaxi162Scf00980g00131 Petunia axillaris HOM05D000312 ORTHO05D000221 2.1e-06 56.6 75 46.7
Rhsim12G0068900 Rhododendron simsii HOM05D000312 ORTHO05D000221 2.1e-06 56.6 81 39.5
Sopen04g005290 Solanum pennellii HOM05D000312 ORTHO05D000221 2.1e-06 56.6 84 42.9
Sopen09g006850 Solanum pennellii HOM05D000312 ORTHO05D011153 2.1e-06 56.6 52 55.8
Peaxi162Scf00179g00628 Petunia axillaris HOM05D000312 ORTHO05D000221 2.7e-06 56.2 78 44.9
Peaxi162Scf00188g00538 Petunia axillaris HOM05D000312 ORTHO05D000221 2.7e-06 56.2 64 51.6
Peaxi162Scf00777g00010 Petunia axillaris HOM05D000312 ORTHO05D000221 2.7e-06 56.2 40 70.0
CSS0004612 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 4.7e-06 55.5 97 40.2
CSS0033318 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 4.7e-06 55.5 96 40.6
Glyma.02G127700 Glycine max HOM05D000312 ORTHO05D000221 6.1e-06 55.1 115 32.2
Duzib251G0105 Durio zibethinus HOM05D000312 ORTHO05D000221 7.9e-06 54.7 148 28.4
Nitab4.5_0007853g0050 Nicotiana tabacum HOM05D043133 ORTHO05D011153 7.9e-06 54.7 71 50.7
Peaxi162Scf00179g00626 Petunia axillaris HOM05D000312 ORTHO05D000221 7.9e-06 54.7 80 37.5


User provided reference genes

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