Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 4.1e-72 274.6 141 100.0
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 1.2e-68 263.1 142 97.2
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 2.9e-57 225.3 140 86.4
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.5e-32 142.5 142 59.9
Peaxi162Scf00315g00011 Petunia axillaris HOM05D003969 ORTHO05D003125 1.5e-26 123.2 147 55.1
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 6.9e-19 97.8 100 51.0
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 3.4e-18 95.5 97 53.6
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 4.5e-18 95.1 125 51.2
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 5.9e-18 94.7 137 47.4
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 3.6e-15 85.5 140 46.4
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 1.8e-14 83.2 140 45.7
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 9.7e-13 77.4 72 58.3
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 9.7e-13 77.4 72 58.3
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 1.2e-10 70.5 133 39.8
MSTRG.26029 Avicennia marina HOM05D003969 ORTHO05D003125 4.5e-10 68.6 79 48.1
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.3e-09 67.0 130 40.0
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.3e-09 67.0 130 40.0
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 1.3e-09 67.0 72 52.8
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 3.8e-09 65.5 123 40.7
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 3.8e-09 65.5 120 39.2
Oeu057292.1 Olea europaea HOM05D003969 ORTHO05D003125 3.8e-09 65.5 126 38.1
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 5.0e-09 65.1 97 43.3
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 5.0e-09 65.1 87 50.6
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 6.5e-09 64.7 123 39.8
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 1.1e-08 63.9 123 37.4
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 1.1e-08 63.9 64 51.6
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 1.5e-08 63.5 84 45.2
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 1.5e-08 63.5 92 44.6
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 1.5e-08 63.5 111 37.8
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 1.9e-08 63.2 84 47.6
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.5e-08 62.8 123 37.4
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.2e-08 62.4 85 47.1
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.2e-08 62.0 100 38.0
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.2e-08 62.0 100 38.0
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 5.5e-08 61.6 101 47.5
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 5.5e-08 61.6 69 47.8
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 5.5e-08 61.6 76 50.0
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 7.2e-08 61.2 113 38.1
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 7.2e-08 61.2 65 50.8
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 7.2e-08 61.2 130 38.5
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 7.2e-08 61.2 113 39.8
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 9.4e-08 60.8 76 50.0
PGSC0003DMG400036991 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.2e-07 60.5 70 48.6
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.2e-07 60.5 118 34.7
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.6e-07 60.1 100 45.0
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 1.6e-07 60.1 70 47.1
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.6e-07 60.1 120 38.3
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 2.1e-07 59.7 84 46.4
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 2.1e-07 59.7 123 35.8
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 2.1e-07 59.7 72 47.2
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 2.7e-07 59.3 83 45.8
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.7e-07 59.3 70 42.9
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 2.7e-07 59.3 101 44.6
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 3.6e-07 58.9 114 36.8
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.7e-07 58.5 116 39.7
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 4.7e-07 58.5 79 39.2
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 6.1e-07 58.2 78 39.7
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 6.1e-07 58.2 113 38.1
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 6.1e-07 58.2 89 40.4
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 8.0e-07 57.8 70 47.1
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 8.0e-07 57.8 109 38.5
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 8.0e-07 57.8 111 36.0
Sopen07g003200 Solanum pennellii HOM05D003969 ORTHO05D003125 8.0e-07 57.8 68 47.1
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 1.0e-06 57.4 89 42.7
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 1.4e-06 57.0 99 37.4
AUR62031569 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.4e-06 57.0 110 40.0
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 1.4e-06 57.0 66 48.5
THA.LOC104815009 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 1.4e-06 57.0 122 36.9
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 1.4e-06 57.0 99 34.3
Aa31sc598G40 Aethionema arabicum HOM05D003969 ORTHO05D003125 1.8e-06 56.6 117 37.6
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.8e-06 56.6 126 37.3
Eucgr.C01701 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.8e-06 56.6 72 45.8
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 2.3e-06 56.2 112 36.6
AUR62012444 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.3e-06 56.2 110 39.1
PGSC0003DMG400030696 Solanum tuberosum HOM05D003969 ORTHO05D003125 2.3e-06 56.2 70 44.3
CANSAT11G0887 Cannabis sativa HOM05D003969 ORTHO05D003125 3.0e-06 55.8 119 36.1
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 3.0e-06 55.8 74 44.6
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 3.0e-06 55.8 120 39.2
Eucgr.C01640 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.0e-06 55.5 72 44.4
Lalb_Chr13g0301201 Lupinus albus HOM05D003969 ORTHO05D003125 4.0e-06 55.5 64 48.4
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 5.2e-06 55.1 131 36.6
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 5.2e-06 55.1 131 36.6
Eucgr.C00437 Eucalyptus grandis HOM05D003969 ORTHO05D003125 5.2e-06 55.1 86 41.9
Solyc07g007150.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 5.2e-06 55.1 68 45.6
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 6.7e-06 54.7 131 37.4
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 6.7e-06 54.7 109 40.4
Eucgr.C01639 Eucalyptus grandis HOM05D003969 ORTHO05D003125 6.7e-06 54.7 86 36.0
Eucgr.C01695 Eucalyptus grandis HOM05D003969 ORTHO05D003125 6.7e-06 54.7 71 45.1
Eucgr.C01699 Eucalyptus grandis HOM05D003969 ORTHO05D003125 6.7e-06 54.7 70 42.9
Eucgr.L03259 Eucalyptus grandis HOM05D003969 ORTHO05D003125 6.7e-06 54.7 67 47.8
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 6.7e-06 54.7 138 34.8
HPP92_023807 Vanilla planifolia HOM05D003969 ORTHO05D003125 6.7e-06 54.7 62 41.9
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 8.8e-06 54.3 98 38.8
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 8.8e-06 54.3 144 36.1


User provided reference genes

Program Settings