Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 1.3e-232 809.3 401 100.0
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 6.2e-230 800.4 401 99.0
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 5.8e-228 793.9 400 98.0
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 3.0e-216 755.0 409 91.7
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 5.3e-205 717.6 410 88.3
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 5.5e-202 707.6 416 86.1
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 9.4e-178 627.1 440 75.7
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 2.1e-177 625.9 393 77.9
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 2.3e-176 622.5 397 78.1
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 2.3e-176 622.5 407 77.4
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.4e-173 613.2 376 79.8
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 3.1e-173 612.1 406 76.4
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 1.7e-171 606.3 391 76.7
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 2.2e-171 605.9 391 77.7
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 6.5e-171 604.4 397 77.1
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 1.1e-170 603.6 373 81.2
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 5.5e-170 601.3 402 75.1
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 5.5e-170 601.3 384 76.8
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 3.6e-169 598.6 390 75.9
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 6.1e-169 597.8 401 75.1
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 7.9e-169 597.4 396 75.3
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 2.3e-168 595.9 400 74.2
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 6.7e-168 594.3 390 74.9
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 2.0e-167 592.8 375 76.5
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 4.4e-167 591.7 401 73.3
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 9.7e-167 590.5 398 74.4
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 1.3e-166 590.1 393 74.8
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 1.3e-166 590.1 355 80.6
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.7e-166 589.7 416 72.4
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 2.8e-166 589.0 399 73.2
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 3.7e-166 588.6 388 75.0
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 3.7e-166 588.6 372 79.0
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 4.8e-166 588.2 386 75.1
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 6.3e-166 587.8 385 75.8
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.1e-165 587.0 398 73.4
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 5.3e-165 584.7 386 75.9
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 9.1e-165 583.9 403 73.2
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 9.1e-165 583.9 389 74.6
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 2.6e-164 582.4 351 80.6
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 1.0e-163 580.5 374 76.2
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.0e-163 580.5 384 75.3
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 1.0e-163 580.5 448 67.0
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.3e-163 580.1 404 74.5
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 5.0e-163 578.2 385 75.3
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 8.5e-163 577.4 391 74.2
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.1e-162 577.0 386 73.6
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.5e-162 576.6 355 77.2
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.5e-162 576.6 398 73.1
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.9e-162 576.2 381 75.6
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.9e-162 576.2 401 71.8
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.9e-162 576.2 366 78.4
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 1.9e-162 576.2 367 76.6
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 1.9e-162 576.2 367 76.6
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 4.2e-162 575.1 368 75.3
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 4.2e-162 575.1 402 71.6
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 5.5e-162 574.7 397 72.5
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 7.2e-162 574.3 362 78.2
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 9.4e-162 573.9 399 72.2
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 1.2e-161 573.5 405 71.9
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.2e-161 573.5 398 72.9
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.2e-161 573.5 398 72.1
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 2.3e-160 569.3 389 73.0
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.0e-160 568.9 338 81.1
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 3.0e-160 568.9 401 72.3
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 4.0e-160 568.5 397 71.8
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 6.7e-160 567.8 338 80.8
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 6.7e-160 567.8 338 80.8
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 6.7e-160 567.8 338 81.1
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 6.7e-160 567.8 351 78.6
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 8.8e-160 567.4 397 71.5
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 1.5e-159 566.6 385 74.5
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 4.4e-159 565.1 384 74.0
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 6.3e-158 561.2 329 82.7
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 6.3e-158 561.2 358 76.0
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 8.2e-158 560.8 331 81.6
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.4e-157 560.1 397 70.8
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 7.0e-157 557.8 337 77.7
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 7.0e-157 557.8 337 77.7
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 1.2e-156 557.0 332 78.6
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 1.2e-156 557.0 346 75.4
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 2.7e-156 555.8 381 71.9
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 5.9e-156 554.7 337 76.6
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 1.0e-155 553.9 338 76.6
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 1.0e-155 553.9 338 76.6
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 1.0e-155 553.9 338 76.3
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 1.0e-155 553.9 342 75.7
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 1.0e-155 553.9 347 74.4
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 1.3e-155 553.5 359 73.3
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 5.0e-155 551.6 342 74.9
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 8.5e-155 550.8 342 75.1
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 1.1e-154 550.4 378 70.6
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 3.2e-154 548.9 390 69.0
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 4.4e-151 538.5 430 63.7
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 5.7e-151 538.1 398 69.3
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 5.4e-149 531.6 391 72.1
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 4.5e-148 528.5 398 68.8
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 4.5e-148 528.5 368 71.2
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.0e-147 525.0 396 67.7
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 6.5e-147 524.6 357 73.1
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 8.0e-145 517.7 299 83.3
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 3.1e-141 505.8 389 67.9
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 4.7e-137 491.9 386 63.7
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 8.0e-137 491.1 339 72.9
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 4.3e-130 468.8 329 67.5
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.1e-129 466.5 335 66.9
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 4.0e-128 462.2 336 65.8
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 3.4e-127 459.1 311 74.6
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 1.7e-126 456.8 336 64.9
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.4e-112 410.6 328 63.4
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 1.5e-111 407.1 287 69.7
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 8.6e-107 391.3 248 77.4
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.8e-88 330.5 288 56.9
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 2.2e-86 323.6 291 55.3
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.9e-85 320.5 303 57.8
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 1.4e-80 304.3 302 48.7
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.0e-75 288.1 188 73.4
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 9.7e-66 255.0 170 75.3
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.8e-56 224.2 186 61.8
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 2.3e-51 207.2 130 73.8
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.3e-41 174.9 113 76.1
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.7e-33 146.7 102 68.6
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 6.1e-28 129.4 112 59.8
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.0e-26 124.4 120 54.2
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 6.1e-20 102.8 158 39.2
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.4e-19 101.7 106 50.0
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.7e-17 94.7 74 62.2
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 4.1e-16 90.1 53 79.2


User provided reference genes

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