Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.5e-89 332.8 165 100.0
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 8.2e-88 327.0 165 98.2
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 1.2e-86 323.2 165 96.4
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 1.5e-76 289.7 163 90.2
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 9.4e-76 287.0 165 89.7
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.0e-73 279.3 162 86.4
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 2.9e-64 248.8 141 85.8
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.0e-62 242.7 139 86.3
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 2.8e-59 232.3 159 70.4
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 7.5e-57 224.2 149 73.2
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 1.3e-56 223.4 160 70.6
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 1.3e-56 223.4 152 74.3
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 4.9e-56 221.5 165 66.7
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 8.3e-56 220.7 159 69.2
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 1.1e-55 220.3 161 68.9
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.1e-55 220.3 157 70.1
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 2.4e-55 219.2 160 67.5
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 2.4e-55 219.2 165 66.1
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 3.2e-55 218.8 165 67.3
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 3.2e-55 218.8 157 70.1
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 5.4e-55 218.0 143 72.0
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 7.0e-55 217.6 163 66.3
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 9.2e-55 217.2 150 72.0
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 4.6e-54 214.9 196 60.2
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 6.0e-54 214.5 165 65.5
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.3e-53 213.4 163 67.5
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.3e-53 213.4 157 66.2
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 3.0e-53 212.2 142 71.8
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 3.9e-53 211.8 151 71.5
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 5.0e-53 211.5 162 64.8
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 6.6e-53 211.1 160 67.5
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 6.6e-53 211.1 153 62.7
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 8.6e-53 210.7 155 67.7
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 1.9e-52 209.5 149 68.5
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 3.3e-52 208.8 161 62.7
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 4.3e-52 208.4 155 67.1
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 4.3e-52 208.4 162 61.7
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 4.3e-52 208.4 156 66.0
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 5.6e-52 208.0 139 70.5
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 7.3e-52 207.6 160 65.0
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 9.5e-52 207.2 151 68.9
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 9.5e-52 207.2 151 68.9
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 9.5e-52 207.2 161 62.7
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.2e-51 206.8 151 68.9
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 1.2e-51 206.8 159 65.4
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 3.6e-51 205.3 162 63.0
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 4.7e-51 204.9 146 70.5
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 6.2e-51 204.5 150 65.3
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 6.2e-51 204.5 147 68.7
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 1.1e-50 203.8 150 63.3
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 1.4e-50 203.4 159 65.4
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 2.3e-50 202.6 147 63.3
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 2.3e-50 202.6 148 62.2
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 2.3e-50 202.6 158 62.7
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 6.8e-50 201.1 154 68.2
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 1.5e-49 199.9 148 62.8
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 2.0e-49 199.5 159 64.2
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 3.4e-49 198.7 148 60.8
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 4.4e-49 198.4 147 61.9
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 4.4e-49 198.4 169 60.4
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 5.8e-49 198.0 151 62.3
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 5.8e-49 198.0 169 58.6
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 1.7e-48 196.4 148 62.2
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.7e-48 196.4 211 51.2
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 1.7e-48 196.4 157 63.1
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 2.2e-48 196.1 148 62.2
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 6.4e-48 194.5 148 62.8
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 6.4e-48 194.5 164 61.0
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 6.4e-48 194.5 148 61.5
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 8.3e-48 194.1 139 69.8
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 1.9e-47 193.0 147 68.7
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 3.2e-47 192.2 163 60.7
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 9.2e-47 190.7 140 62.9
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 1.0e-45 187.2 129 68.2
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 6.6e-45 184.5 160 59.4
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 1.1e-44 183.7 155 60.6
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 1.1e-44 183.7 173 56.1
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 5.6e-44 181.4 154 59.1
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 9.5e-44 180.6 162 58.0
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.8e-43 179.1 141 61.0
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 6.2e-43 177.9 152 60.5
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 2.6e-41 172.6 147 55.8
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.7e-40 169.9 144 58.3
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 4.9e-32 141.7 131 56.5
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 1.9e-31 139.8 140 50.7
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 2.1e-30 136.3 109 56.9
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 1.1e-26 124.0 140 44.3
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 5.3e-26 121.7 74 81.1
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 4.5e-25 118.6 90 61.1
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 7.6e-25 117.9 143 44.1
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 4.9e-24 115.2 96 65.6
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.2e-17 94.0 71 60.6
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 1.1e-15 87.4 107 43.9
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 9.3e-15 84.3 63 60.3
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 2.7e-14 82.8 76 56.6
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 2.3e-13 79.7 76 55.3
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 3.9e-13 79.0 64 56.2
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 6.0e-06 55.1 73 42.5


User provided reference genes

Program Settings