Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 3.6e-140 501.5 241 100.0
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 2.1e-132 475.7 245 95.1
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 7.7e-119 430.6 253 87.0
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.2e-90 337.0 257 70.4
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 8.3e-89 330.9 255 70.6
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 1.6e-68 263.5 246 56.5
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 6.9e-67 258.1 243 55.6
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 1.5e-66 256.9 243 55.6
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 6.4e-65 251.5 243 54.3
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 4.2e-56 222.2 242 51.7
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 7.1e-56 221.5 274 47.4
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 1.3e-52 210.7 283 45.9
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.4e-51 207.2 234 50.9
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 1.8e-51 206.8 270 47.8
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 1.9e-48 196.8 247 46.6
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 1.9e-45 186.8 268 43.7
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 5.7e-45 185.3 251 44.6
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 2.9e-41 172.9 245 42.4
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 1.1e-40 171.0 249 39.4
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 4.6e-39 165.6 259 37.1
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 5.7e-37 158.7 237 41.4
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 1.8e-35 153.7 224 42.9
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 2.2e-33 146.7 241 36.9
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 2.9e-33 146.4 248 41.1
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 3.8e-33 146.0 247 39.7
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 5.0e-33 145.6 266 37.2
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 3.2e-32 142.9 253 33.2
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 9.4e-32 141.4 235 36.6
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 3.6e-31 139.4 236 39.8
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 3.6e-31 139.4 228 36.4
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 4.6e-31 139.0 252 38.1
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 6.1e-31 138.7 232 37.1
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 1.0e-30 137.9 249 35.3
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 1.4e-30 137.5 242 34.3
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 1.4e-30 137.5 243 39.9
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 5.1e-30 135.6 239 36.4
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.1e-30 135.6 249 34.9
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 6.7e-30 135.2 134 53.7
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.1e-29 134.4 249 34.9
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.1e-29 134.4 240 35.4
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.0e-29 133.7 240 35.4
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 4.4e-29 132.5 254 37.4
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 7.4e-29 131.7 247 34.0
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 2.8e-28 129.8 241 34.9
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.1e-27 127.9 255 36.9
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 1.4e-27 127.5 240 36.2
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 2.4e-27 126.7 234 34.2
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 2.4e-27 126.7 236 33.5
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 3.1e-27 126.3 258 33.7
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 5.3e-27 125.6 249 34.1
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 5.3e-27 125.6 240 35.0
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 3.4e-26 122.9 239 35.6
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 7.7e-26 121.7 261 36.4
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 7.7e-26 121.7 231 35.5
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 1.0e-25 121.3 247 34.0
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 2.5e-24 116.7 157 40.1
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 3.2e-24 116.3 243 31.7
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 7.2e-24 115.2 148 45.9
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 7.2e-24 115.2 251 35.1
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 1.6e-23 114.0 239 33.9
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 4.7e-23 112.5 88 58.0
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 4.7e-23 112.5 253 34.0
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 6.1e-23 112.1 226 33.6
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 1.8e-22 110.5 259 35.1
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 6.7e-22 108.6 93 58.1
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 6.7e-22 108.6 248 34.3
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 1.5e-21 107.5 99 52.5
ECA233G1347 Erigeron canadensis HOM05D007097 ORTHO05D008131 3.3e-21 106.3 234 29.9
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 7.4e-21 105.1 241 30.7
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 9.7e-21 104.8 241 33.6
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 2.2e-20 103.6 240 30.4
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 2.2e-20 103.6 239 31.4
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 1.1e-19 101.3 238 30.7
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 2.4e-19 100.1 249 32.9
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 2.4e-19 100.1 242 31.0
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 5.3e-19 99.0 256 30.5
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 5.3e-19 99.0 255 29.4
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 1.6e-18 97.4 220 32.3
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 2.6e-18 96.7 255 28.2
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.3e-17 94.4 157 40.8
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 2.2e-17 93.6 245 30.2
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 1.5e-16 90.9 254 29.1
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 3.2e-16 89.7 243 27.6
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 3.2e-16 89.7 266 27.8
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 9.4e-16 88.2 93 50.5
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 2.1e-15 87.0 245 29.4
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 3.6e-15 86.3 247 27.9
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 1.0e-14 84.7 244 29.1
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 1.8e-14 84.0 99 42.4
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 1.5e-13 80.9 98 39.8
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 1.5e-13 80.9 140 33.6
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 2.0e-13 80.5 112 38.4
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 3.3e-13 79.7 96 43.8
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 4.4e-13 79.3 246 26.0
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 7.5e-13 78.6 239 26.4
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 1.3e-12 77.8 239 27.2
CBR_g27764 Chara braunii HOM05D017347 ORTHO05D008131 6.3e-12 75.5 112 38.4
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 1.1e-11 74.7 105 38.1
SEGI_18590 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 1.6e-10 70.9 94 36.2
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.7e-10 70.1 63 49.2
Actinidia03892 Actinidia chinensis HOM05D007097 ORTHO05D008131 3.5e-10 69.7 108 39.8
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 4.5e-10 69.3 104 32.7
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 7.7e-10 68.6 186 31.7
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 3.8e-09 66.2 115 32.2
Oeu006273.1 Olea europaea HOM05D007097 ORTHO05D008131 1.1e-08 64.7 126 34.9
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 1.5e-08 64.3 111 35.1
Os04g0685700 Oryza sativa ssp. japonica HOM05D007097 ORTHO05D008131 2.1e-07 60.5 245 23.3
Nn3g18010 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.0e-06 58.2 79 41.8


User provided reference genes

Program Settings