Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g001860 Solanum pennellii HOM05D000001 ORTHO05D010330 2.0e-21 109.0 80 100.0
Solyc03g082790.4 Solanum lycopersicum HOM05D000001 ORTHO05D010330 5.4e-19 100.9 79 96.2
Sopen03g022540 Solanum pennellii HOM05D000001 ORTHO05D010330 5.4e-19 100.9 79 97.5
Sopen01g001850 Solanum pennellii HOM05D000001 ORTHO05D010330 5.1e-17 94.4 78 93.6
Solyc01g005850.2 Solanum lycopersicum HOM05D000001 ORTHO05D010330 1.9e-16 92.4 78 92.3
CAN.G158.20 Capsicum annuum HOM05D000001 ORTHO05D010330 9.6e-16 90.1 49 89.8
CAN.G158.19 Capsicum annuum HOM05D000001 ORTHO05D010330 6.2e-15 87.4 49 83.7
Nitab4.5_0001059g0200 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.1e-14 85.1 49 85.7
PGSC0003DMG400032222 Solanum tuberosum HOM05D000001 ORTHO05D010330 1.0e-12 80.1 49 83.7
Nitab4.5_0001059g0250 Nicotiana tabacum HOM05D000001 ORTHO05D010330 2.9e-12 78.6 48 77.1
Nitab4.5_0001059g0230 Nicotiana tabacum HOM05D000001 ORTHO05D010330 4.9e-12 77.8 46 80.4
Nitab4.5_0008936g0030 Nicotiana tabacum HOM05D000001 ORTHO05D010330 4.9e-12 77.8 48 77.1
Peaxi162Scf01111g00014 Petunia axillaris HOM05D000001 ORTHO05D010330 6.5e-12 77.4 48 79.2
PGSC0003DMG400025936 Solanum tuberosum HOM05D000001 ORTHO05D010330 6.5e-12 77.4 49 77.6
Nitab4.5_0005729g0100 Nicotiana tabacum HOM05D000001 ORTHO05D006702 1.1e-11 76.6 48 79.2
Nitab4.5_0007486g0060 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.2e-11 75.1 48 77.1
Nitab4.5_0001059g0210 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.2e-10 73.2 48 75.0
Nitab4.5_0007486g0050 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.2e-10 73.2 48 72.9
Nitab4.5_0001730g0150 Nicotiana tabacum HOM05D000001 ORTHO05D010330 2.7e-10 72.0 48 72.9
Solyc03g082770.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 6.0e-10 70.9 49 75.5
Nitab4.5_0001059g0220 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.0e-09 70.1 48 75.0
Nitab4.5_0008936g0020 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.0e-09 70.1 47 72.3
Nitab4.5_0002279g0110 Nicotiana tabacum HOM05D000001 ORTHO05D010330 2.3e-09 68.9 47 76.6
Nitab4.5_0009733g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.3e-09 68.9 48 77.1
Nitab4.5_0001105g0210 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.9e-09 68.2 49 69.4
CAN.G606.45 Capsicum annuum HOM05D000001 ORTHO05D010330 6.7e-09 67.4 49 69.4
CAN.G203.45 Capsicum annuum HOM05D000001 ORTHO05D010330 8.7e-09 67.0 48 72.9
Nitab4.5_0003074g0010 Nicotiana tabacum HOM05D000001 ORTHO05D010330 8.7e-09 67.0 49 67.3
Sopen01g001890 Solanum pennellii HOM05D000001 ORTHO05D010330 8.7e-09 67.0 49 73.5
Nitab4.5_0005441g0070 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.1e-08 66.6 48 75.0
Sopen01g041290 Solanum pennellii HOM05D000001 ORTHO05D010330 1.5e-08 66.2 49 67.3
Solyc01g097680.2 Solanum lycopersicum HOM05D000001 ORTHO05D010330 1.9e-08 65.9 78 74.4
Sopen05g030810 Solanum pennellii HOM05D000001 ORTHO05D010330 1.9e-08 65.9 46 76.1
PGSC0003DMG400011652 Solanum tuberosum HOM05D000001 ORTHO05D395843 1.9e-08 65.9 47 74.5
PGSC0003DMG400022516 Solanum tuberosum HOM05D000001 ORTHO05D010330 1.9e-08 65.9 49 65.3
PGSC0003DMG400022518 Solanum tuberosum HOM05D000001 ORTHO05D010330 1.9e-08 65.9 49 65.3
Peaxi162Scf00643g00059 Petunia axillaris HOM05D000001 ORTHO05D010330 2.5e-08 65.5 49 69.4
Solyc01g097690.2 Solanum lycopersicum HOM05D000001 ORTHO05D010330 2.5e-08 65.5 48 68.8
Solyc01g097700.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 2.5e-08 65.5 48 66.7
Solyc01g097720.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 2.5e-08 65.5 48 68.8
Peaxi162Scf00282g00035 Petunia axillaris HOM05D000001 ORTHO05D010330 3.3e-08 65.1 49 71.4
Sopen03g022520 Solanum pennellii HOM05D000001 ORTHO05D010330 3.3e-08 65.1 49 71.4
PGSC0003DMG400019439 Solanum tuberosum HOM05D000001 ORTHO05D010330 3.3e-08 65.1 49 67.3
CAN.G134.127 Capsicum annuum HOM05D000001 ORTHO05D010330 4.3e-08 64.7 49 65.3
Solyc01g005880.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 4.3e-08 64.7 49 71.4
CAN.G134.129 Capsicum annuum HOM05D000001 ORTHO05D010330 5.7e-08 64.3 49 65.3
CAN.G203.46 Capsicum annuum HOM05D000001 ORTHO05D010330 7.4e-08 63.9 47 70.2
Sopen01g041310 Solanum pennellii HOM05D000001 ORTHO05D010330 7.4e-08 63.9 48 66.7
Peaxi162Scf01049g00043 Petunia axillaris HOM05D000001 ORTHO05D010330 9.6e-08 63.5 49 69.4
Peaxi162Scf00282g00132 Petunia axillaris HOM05D000001 ORTHO05D000003 1.3e-07 63.2 49 67.3
Peaxi162Scf72209g00001 Petunia axillaris HOM05D000001 ORTHO05D010330 1.6e-07 62.8 49 69.4
Solyc01g097710.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 1.6e-07 62.8 48 64.6
Sopen01g041320 Solanum pennellii HOM05D000001 ORTHO05D010330 1.6e-07 62.8 48 64.6
Sopen01g041330 Solanum pennellii HOM05D000001 ORTHO05D010330 2.1e-07 62.4 48 64.6
PGSC0003DMG400032223 Solanum tuberosum HOM05D000001 ORTHO05D010330 2.1e-07 62.4 49 71.4
CAN.G134.128 Capsicum annuum HOM05D000001 ORTHO05D010330 3.7e-07 61.6 49 63.3
Peaxi162Scf01049g00041 Petunia axillaris HOM05D000001 ORTHO05D010330 6.2e-07 60.8 49 67.3
Sopen01g041300 Solanum pennellii HOM05D000001 ORTHO05D010330 8.2e-07 60.5 49 63.3
PGSC0003DMG400022514 Solanum tuberosum HOM05D000001 ORTHO05D010330 8.2e-07 60.5 48 64.6
Nitab4.5_0000375g0170 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.1e-06 60.1 48 72.9
Peaxi162Scf01150g00024 Petunia axillaris HOM05D000001 ORTHO05D305764 1.1e-06 60.1 44 72.7
Solyc02g030220.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 1.1e-06 60.1 46 73.9
Peaxi162Scf00016g02742 Petunia axillaris HOM05D000001 ORTHO05D306469 1.4e-06 59.7 46 69.6
Sopen01g049480 Solanum pennellii HOM05D000001 ORTHO05D010330 1.4e-06 59.7 48 66.7
Nitab4.5_0003799g0040 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.1e-06 58.5 46 71.7
Peaxi162Scf00282g00015 Petunia axillaris HOM05D000001 ORTHO05D010330 3.1e-06 58.5 48 64.6
CAN.G134.130 Capsicum annuum HOM05D000001 ORTHO05D010330 5.3e-06 57.8 49 61.2
Peaxi162Scf00117g01732 Petunia axillaris HOM05D000001 ORTHO05D307068 5.3e-06 57.8 44 70.5


User provided reference genes

Program Settings