Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g013600 Solanum pennellii HOM05D001607 ORTHO05D001893 6.7e-60 233.8 117 100.0
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 3.8e-55 218.0 110 98.2
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 9.7e-51 203.4 110 91.8
Peaxi162Scf00444g00720 Petunia axillaris HOM05D001607 ORTHO05D001893 6.3e-50 200.7 110 90.0
CAN.G307.25 Capsicum annuum HOM05D001607 ORTHO05D001893 3.1e-49 198.4 110 90.9
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 5.7e-43 177.6 113 76.1
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 1.7e-42 176.0 111 76.6
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.2e-42 175.6 111 77.5
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.8e-42 175.3 111 77.5
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.8e-42 175.3 111 77.5
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.8e-42 175.3 111 77.5
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.8e-42 175.3 111 77.5
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 2.8e-42 175.3 103 80.6
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 4.8e-42 174.5 110 76.4
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 4.8e-42 174.5 110 77.3
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 6.3e-42 174.1 118 79.7
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 8.3e-42 173.7 111 76.6
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 8.3e-42 173.7 111 76.6
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 8.3e-42 173.7 111 76.6
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 8.3e-42 173.7 110 76.4
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 1.1e-41 173.3 108 76.9
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 3.1e-41 171.8 111 77.5
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 4.1e-41 171.4 111 78.4
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 4.1e-41 171.4 110 76.4
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 4.1e-41 171.4 110 76.4
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 5.4e-41 171.0 112 75.9
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 5.4e-41 171.0 100 84.0
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 7.0e-41 170.6 110 75.5
Oeu045396.1 Olea europaea HOM05D001607 ORTHO05D001893 1.2e-40 169.9 102 81.4
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 1.2e-40 169.9 103 78.6
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 1.6e-40 169.5 116 73.3
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 2.7e-40 168.7 110 74.5
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 5.9e-40 167.5 110 76.4
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 1.0e-39 166.8 118 72.0
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.3e-39 166.4 110 74.5
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 1.3e-39 166.4 113 71.7
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 2.3e-39 165.6 108 75.0
QL93p1997_0001 Quercus lobata HOM05D001607 ORTHO05D001893 3.8e-39 164.9 111 74.8
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 5.0e-39 164.5 114 70.2
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 5.0e-39 164.5 113 73.5
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 6.6e-39 164.1 116 72.4
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 8.6e-39 163.7 107 74.8
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 1.5e-38 162.9 116 71.6
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 4.2e-38 161.4 98 79.6
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 4.2e-38 161.4 101 78.2
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 5.5e-38 161.0 112 70.5
Solyc03g025610.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 5.5e-38 161.0 80 98.8
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 7.2e-38 160.6 114 70.2
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 7.2e-38 160.6 120 70.0
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 7.2e-38 160.6 102 75.5
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 9.5e-38 160.2 112 70.5
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 1.2e-37 159.8 114 70.2
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.6e-37 159.5 108 70.4
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 1.6e-37 159.5 100 77.0
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 2.1e-37 159.1 121 67.8
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 2.8e-37 158.7 108 69.4
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 2.8e-37 158.7 110 71.8
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 2.8e-37 158.7 115 69.6
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 6.1e-37 157.5 119 68.9
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 6.1e-37 157.5 119 68.9
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 6.1e-37 157.5 123 67.5
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 8.0e-37 157.1 123 67.5
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 8.0e-37 157.1 96 77.1
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 8.0e-37 157.1 119 67.2
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 8.0e-37 157.1 126 65.9
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 8.0e-37 157.1 119 67.2
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 8.0e-37 157.1 105 74.3
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 8.0e-37 157.1 110 70.9
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.0e-36 156.8 120 68.3
Gohir.D08G110724 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.0e-36 156.8 126 65.9
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 1.4e-36 156.4 119 68.1
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 1.4e-36 156.4 98 77.6
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 1.4e-36 156.4 98 77.6
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 1.8e-36 156.0 98 78.6
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 1.8e-36 156.0 98 77.6
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 1.8e-36 156.0 98 77.6
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 1.8e-36 156.0 98 77.6
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 1.8e-36 156.0 121 66.9
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.8e-36 156.0 108 72.2
BcaNung04146 Brassica carinata HOM05D001607 ORTHO05D001893 2.3e-36 155.6 124 66.1
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 2.3e-36 155.6 108 69.4
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 2.3e-36 155.6 119 68.1
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 3.0e-36 155.2 106 72.6
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 3.0e-36 155.2 110 70.0
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 3.0e-36 155.2 103 72.8
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 4.0e-36 154.8 110 70.9
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 4.0e-36 154.8 98 76.5
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 4.0e-36 154.8 108 71.3
Cpa.g.sc107.66 Carica papaya HOM05D001607 ORTHO05D001893 5.2e-36 154.5 120 65.0
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 5.2e-36 154.5 98 76.5
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 6.8e-36 154.1 122 63.9
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 8.9e-36 153.7 98 76.5
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 8.9e-36 153.7 126 64.3
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 8.9e-36 153.7 114 68.4
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 1.2e-35 153.3 108 68.5
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.2e-35 153.3 114 68.4
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 1.2e-35 153.3 120 65.0
Glyma.09G137300 Glycine max HOM05D001607 ORTHO05D001893 1.5e-35 152.9 124 64.5
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 2.0e-35 152.5 98 75.5
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 2.6e-35 152.1 98 76.5
ClCG00G002820 Citrullus lanatus HOM05D001607 ORTHO05D001893 2.6e-35 152.1 115 67.8
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 4.4e-35 151.4 111 72.1
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 4.4e-35 151.4 111 66.7
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 5.7e-35 151.0 112 65.2
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 9.8e-35 150.2 129 61.2
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 9.8e-35 150.2 102 67.6
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 1.7e-34 149.4 121 62.0
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 1.7e-34 149.4 101 68.3
Cfa022709 Carpinus fangiana HOM05D001607 ORTHO05D001893 2.2e-34 149.1 111 70.3
Cfa022711 Carpinus fangiana HOM05D001607 ORTHO05D001893 2.2e-34 149.1 111 70.3
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 2.8e-34 148.7 100 75.0
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 2.8e-34 148.7 110 67.3
Psat0s3405g0040 Pisum sativum HOM05D001607 ORTHO05D001893 6.3e-34 147.5 101 70.3
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 1.1e-33 146.7 102 65.7
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 1.1e-33 146.7 87 79.3
arahy.Tifrunner.gnm1.ann1.5UA5U0 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.4e-33 145.6 104 68.3
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 3.1e-33 145.2 113 66.4
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 4.1e-33 144.8 97 73.2
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 5.4e-33 144.4 99 71.7
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 7.0e-33 144.1 94 71.3
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 9.2e-33 143.7 129 58.1
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 1.2e-32 143.3 122 61.5
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.2e-32 143.3 96 70.8
CDE08G0131 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 2.7e-32 142.1 95 73.7
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 3.5e-32 141.7 92 72.8
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 4.5e-32 141.4 129 59.7
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 5.9e-32 141.0 102 68.6
HPP92_006560 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.3e-31 139.8 97 69.1
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 1.5e-30 136.3 92 71.7
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 1.9e-30 136.0 91 70.3
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 5.6e-30 134.4 80 80.0
GSVIVG01020947001 Vitis vinifera HOM05D001607 ORTHO05D001893 1.2e-29 133.3 113 61.1
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 1.6e-29 132.9 91 71.4
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 3.6e-29 131.7 88 72.7
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 6.1e-29 131.0 90 70.0
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 1.8e-28 129.4 80 76.2
QL09p013733 Quercus lobata HOM05D001607 ORTHO05D001893 3.0e-28 128.6 85 74.1
arahy.Tifrunner.gnm1.ann1.5K396S Arachis hypogaea HOM05D001607 ORTHO05D001893 4.0e-28 128.3 129 55.0
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 8.9e-28 127.1 71 83.1
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 1.2e-27 126.7 110 57.3
Ca_14559_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 5.8e-27 124.4 80 70.0
Cre16.g675350 Chlamydomonas reinhardtii HOM05D001607 ORTHO05D001893 2.2e-26 122.5 87 67.8
Actinidia27741 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.1e-21 105.9 80 71.2
Actinidia28326 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.1e-21 105.9 80 71.2
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 1.0e-15 87.0 57 71.9
SEGI_31249 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 8.6e-15 84.0 52 75.0
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.5e-14 83.2 98 51.0
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 1.1e-12 77.0 81 49.4
arahy.Tifrunner.gnm1.ann1.18M8R5 Arachis hypogaea HOM05D001607 ORTHO05D001893 3.4e-11 72.0 90 47.8
GSVIVG01020954001 Vitis vinifera HOM05D001607 ORTHO05D001893 1.3e-10 70.1 57 61.4
Hma1.2p1_1380F.1_g279270 Hydrangea macrophylla HOM05D001607 ORTHO05D001893 2.9e-10 68.9 49 69.4
Medtr1g101015 Medicago truncatula HOM05D001607 ORTHO05D001893 1.1e-09 67.0 49 59.2
arahy.Tifrunner.gnm1.ann1.C6CLGC Arachis hypogaea HOM05D001607 ORTHO05D001893 9.2e-09 63.9 61 59.0


User provided reference genes

Program Settings