Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g013550 Solanum pennellii HOM05D004252 ORTHO05D005101 2.7e-33 144.8 76 100.0
Solyc01g097320.3 Solanum lycopersicum HOM05D004252 ORTHO05D005101 7.3e-31 136.7 71 100.0
CAN.G134.97 Capsicum annuum HOM05D004252 ORTHO05D005101 2.8e-30 134.8 71 98.6
Peaxi162Scf00282g00418 Petunia axillaris HOM05D004252 ORTHO05D005101 4.0e-29 131.0 72 94.4
Nitab4.5_0008996g0010 Nicotiana tabacum HOM05D004252 ORTHO05D005101 1.2e-28 129.4 71 93.0
CAN.G1116.5 Capsicum annuum HOM05D004252 ORTHO05D005101 7.5e-28 126.7 70 92.9
Cc02_g30700 Coffea canephora HOM05D004252 ORTHO05D005101 8.3e-27 123.2 71 88.7
Hund06974 Selenicereus undatus HOM05D004252 ORTHO05D005101 1.6e-25 119.0 71 84.5
Dinv20302 Davidia involucrata HOM05D004252 ORTHO05D005101 2.0e-25 118.6 71 84.5
Lsat_1_v5_gn_5_53600 Lactuca sativa HOM05D004252 ORTHO05D005101 1.3e-24 115.9 71 81.7
Gohir.D08G232300 Gossypium hirsutum HOM05D004252 ORTHO05D005101 1.7e-24 115.5 71 81.7
Gorai.004G246800 Gossypium raimondii HOM05D004252 ORTHO05D005101 1.7e-24 115.5 71 81.7
Lj1A1079G39 Lonicera japonica HOM05D004252 ORTHO05D005101 1.7e-24 115.5 71 81.7
THA.LOC104821672 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 1.7e-24 115.5 71 80.3
Gohir.A08G215700 Gossypium hirsutum HOM05D004252 ORTHO05D005101 2.3e-24 115.2 71 81.7
Duzib128G1785 Durio zibethinus HOM05D004252 ORTHO05D005101 3.0e-24 114.8 71 80.3
EL10Ac4g09148 Beta vulgaris HOM05D004252 ORTHO05D005101 3.9e-24 114.4 71 80.3
Manes.09G152800 Manihot esculenta HOM05D004252 ORTHO05D005101 3.9e-24 114.4 71 80.3
THA.LOC104818630 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 3.9e-24 114.4 71 80.3
Thecc.05G283200 Theobroma cacao HOM05D004252 ORTHO05D005101 3.9e-24 114.4 71 80.3
COL.COLO4_15351 Corchorus olitorius HOM05D004252 ORTHO05D005101 5.0e-24 114.0 71 80.3
BraA05t22970Z Brassica rapa HOM05D004252 ORTHO05D005101 6.6e-24 113.6 74 75.7
ECA240G2739 Erigeron canadensis HOM05D004252 ORTHO05D005101 6.6e-24 113.6 71 80.3
CSS0026350 Camellia sinensis var. sinensis HOM05D004252 ORTHO05D005101 8.6e-24 113.2 71 80.3
CANSAT54G1217 Cannabis sativa HOM05D004252 ORTHO05D005101 1.1e-23 112.8 70 81.4
HanXRQChr03g0080781 Helianthus annuus HOM05D004252 ORTHO05D005101 1.1e-23 112.8 71 78.9
AL3G14870 Arabidopsis lyrata HOM05D004252 ORTHO05D005101 2.5e-23 111.7 71 77.5
A05p42820 Brassica napus HOM05D004252 ORTHO05D005101 2.5e-23 111.7 71 78.9
Nn3g19509 Nelumbo nucifera HOM05D004252 ORTHO05D005101 2.5e-23 111.7 71 78.9
Cpa.g.sc1346.1 Carica papaya HOM05D004252 ORTHO05D005101 3.3e-23 111.3 70 78.6
Thhalv10019885m.g Eutrema salsugineum HOM05D004252 ORTHO05D005101 3.3e-23 111.3 71 77.5
TWI12G0933 Tripterygium wilfordii HOM05D004252 ORTHO05D005101 3.3e-23 111.3 71 80.3
Actinidia32806 Actinidia chinensis HOM05D004252 ORTHO05D005101 4.3e-23 110.9 71 78.9
Aa31LG5G15140 Aethionema arabicum HOM05D004252 ORTHO05D005101 5.6e-23 110.5 71 74.6
AT3G04740 Arabidopsis thaliana HOM05D004252 ORTHO05D005101 5.6e-23 110.5 71 76.1
C05p62540 Brassica napus HOM05D004252 ORTHO05D005101 5.6e-23 110.5 71 77.5
BolC5t34909H Brassica oleracea HOM05D004252 ORTHO05D005101 5.6e-23 110.5 71 77.5
Duzib177G1152 Durio zibethinus HOM05D004252 ORTHO05D005101 5.6e-23 110.5 71 77.5
DCAR_023243 Daucus carota HOM05D004252 ORTHO05D005101 7.3e-23 110.2 71 76.1
HanXRQChr13g0411361 Helianthus annuus HOM05D004252 ORTHO05D005101 7.3e-23 110.2 71 76.1
TAR362G1238 Trochodendron aralioides HOM05D004252 ORTHO05D005101 7.3e-23 110.2 71 77.5
Migut.B01091 Erythranthe guttata HOM05D004252 ORTHO05D005101 9.5e-23 109.8 72 79.2
Sc20g0000330 Simmondsia chinensis HOM05D004252 ORTHO05D005101 9.5e-23 109.8 71 76.1
Atru.chr2.826 Acer truncatum HOM05D004252 ORTHO05D005101 1.6e-22 109.0 71 77.5
Sabra05G0047100 Salix brachista HOM05D004252 ORTHO05D005101 1.6e-22 109.0 71 76.1
SalBow3G2512 Salvia bowleyana HOM05D004252 ORTHO05D005101 1.6e-22 109.0 72 80.6
Eucgr.B02119 Eucalyptus grandis HOM05D004252 ORTHO05D005101 2.1e-22 108.6 70 78.6
Potri.005G053700 Populus trichocarpa HOM05D004252 ORTHO05D005101 2.1e-22 108.6 71 74.6
Potri.013G041201 Populus trichocarpa HOM05D004252 ORTHO05D005101 2.1e-22 108.6 71 76.1
Glyma.03G247300 Glycine max HOM05D004252 ORTHO05D005101 2.8e-22 108.2 70 75.7
Sp3g03590 Schrenkiella parvula HOM05D004252 ORTHO05D005101 2.8e-22 108.2 70 74.3
arahy.Tifrunner.gnm1.ann1.9CBY7M Arachis hypogaea HOM05D004252 ORTHO05D005101 3.6e-22 107.8 70 75.7
arahy.Tifrunner.gnm1.ann1.QZ0BKE Arachis hypogaea HOM05D004252 ORTHO05D005101 3.6e-22 107.8 70 75.7
Sabra13G0038000 Salix brachista HOM05D004252 ORTHO05D005101 3.6e-22 107.8 71 76.1
TAR633G0655 Trochodendron aralioides HOM05D004252 ORTHO05D005101 3.6e-22 107.8 71 76.1
GSVIVG01021781001 Vitis vinifera HOM05D004252 ORTHO05D005101 3.6e-22 107.8 71 76.1
DCAR_014751 Daucus carota HOM05D004252 ORTHO05D005101 4.7e-22 107.5 71 76.1
Ah.06g192380 Amaranthus hybridus HOM05D004252 ORTHO05D005101 6.2e-22 107.1 71 76.1
Glyma.19G245100 Glycine max HOM05D004252 ORTHO05D005101 6.2e-22 107.1 70 74.3
Phvul.006G101900 Phaseolus vulgaris HOM05D004252 ORTHO05D005101 6.2e-22 107.1 70 74.3
PGR142G2894 Punica granatum HOM05D004252 ORTHO05D005101 6.2e-22 107.1 70 75.7
VMungo0540G0159 Vigna mungo HOM05D004252 ORTHO05D005101 6.2e-22 107.1 70 74.3
arahy.Tifrunner.gnm1.ann1.39XKQR Arachis hypogaea HOM05D004252 ORTHO05D005101 8.1e-22 106.7 70 74.3
ClCG02G016630 Citrullus lanatus HOM05D004252 ORTHO05D005101 8.1e-22 106.7 70 77.1
Ciclev10000014m.g Citrus clementina HOM05D004252 ORTHO05D005101 8.1e-22 106.7 71 74.6
Dinv08153 Davidia involucrata HOM05D004252 ORTHO05D005101 1.1e-21 106.3 84 70.2
Medtr7g115190 Medicago truncatula HOM05D004252 ORTHO05D005101 1.1e-21 106.3 70 72.9
Carub.0003s0391 Capsella rubella HOM05D004252 ORTHO05D005101 1.8e-21 105.5 71 71.8
CDE02G2007 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 1.8e-21 105.5 71 73.2
vmacro20358 Vaccinium macrocarpon HOM05D004252 ORTHO05D005101 1.8e-21 105.5 72 76.4
Lj1g0020341 Lotus japonicus HOM05D004252 ORTHO05D005101 3.1e-21 104.8 70 71.4
Rhsim04G0066800 Rhododendron simsii HOM05D004252 ORTHO05D005101 3.1e-21 104.8 72 76.4
AUR62004951 Chenopodium quinoa HOM05D004252 ORTHO05D005101 4.0e-21 104.4 72 75.0
CsaV3_2G004140 Cucumis sativus L. HOM05D004252 ORTHO05D005101 4.0e-21 104.4 70 74.3
MELO3C004380.2 Cucumis melo HOM05D004252 ORTHO05D005101 5.2e-21 104.0 69 75.4
FvH4_6g02880 Fragaria vesca HOM05D004252 ORTHO05D005101 5.2e-21 104.0 72 72.2
FAN02G2888 Fragaria x ananassa HOM05D004252 ORTHO05D005101 5.2e-21 104.0 72 72.2
FAN14G3887 Fragaria x ananassa HOM05D004252 ORTHO05D005101 5.2e-21 104.0 72 72.2
MD04G1224900 Malus domestica HOM05D004252 ORTHO05D005101 5.2e-21 104.0 71 74.6
CDE06G0814 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 6.8e-21 103.6 71 71.8
MD12G1241600 Malus domestica HOM05D004252 ORTHO05D005101 6.8e-21 103.6 71 74.6
FAN05G2119 Fragaria x ananassa HOM05D004252 ORTHO05D005101 8.9e-21 103.2 72 70.8
Lalb_Chr04g0262241 Lupinus albus HOM05D004252 ORTHO05D005101 8.9e-21 103.2 70 72.9
RcHm_v2.0_Chr3g0451091 Rosa chinensis HOM05D004252 ORTHO05D005101 8.9e-21 103.2 72 72.2
arahy.Tifrunner.gnm1.ann1.YD0KDM Arachis hypogaea HOM05D004252 ORTHO05D005101 1.2e-20 102.8 70 72.9
FAN09G2874 Fragaria x ananassa HOM05D004252 ORTHO05D005101 1.2e-20 102.8 72 70.8
TPR.G6924 Trifolium pratense HOM05D004252 ORTHO05D005101 1.2e-20 102.8 70 70.0
Aqoxy6G01279 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 2.6e-20 101.7 71 71.8
Prupe.6G343600 Prunus persica HOM05D004252 ORTHO05D005101 2.6e-20 101.7 71 71.8
HPP92_026425 Vanilla planifolia HOM05D004252 ORTHO05D005101 3.4e-20 101.3 70 75.7
Ca_09423_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 4.4e-20 100.9 73 67.1
Ca_29790_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 4.4e-20 100.9 73 67.1
PSO832G2970 Papaver somniferum HOM05D004252 ORTHO05D005101 4.4e-20 100.9 71 70.4
PSO210G6431 Papaver somniferum HOM05D004252 ORTHO05D005101 9.9e-20 99.8 71 70.4
BcaB04g19300 Brassica carinata HOM05D004252 ORTHO05D005101 1.3e-19 99.4 71 64.8
arahy.Tifrunner.gnm1.ann1.795G7S Arachis hypogaea HOM05D004252 ORTHO05D005101 1.7e-19 99.0 74 68.9
Cfa006427 Carpinus fangiana HOM05D004252 ORTHO05D005101 1.7e-19 99.0 78 67.9
Haze_04358 Corylus avellana HOM05D004252 ORTHO05D005101 1.7e-19 99.0 78 67.9
Psat3g007080 Pisum sativum HOM05D004252 ORTHO05D005101 1.7e-19 99.0 71 66.2
Aqoxy5G01125 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 2.2e-19 98.6 71 67.6
ATR0665G632 Amborella trichopoda HOM05D004252 ORTHO05D005101 1.4e-18 95.9 70 70.0
CiPaw.08G123300 Carya illinoinensis HOM05D004252 ORTHO05D005101 1.9e-18 95.5 81 63.0
Medtr1g087060 Medicago truncatula HOM05D004252 ORTHO05D005101 2.4e-18 95.1 71 66.2
unitig_699.g19676 Utricularia gibba HOM05D004252 ORTHO05D005101 4.1e-18 94.4 64 79.7
Sed0020402 Sechium edule HOM05D004252 ORTHO05D005101 1.2e-17 92.8 70 67.1
SEGI_02854 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 2.1e-17 92.0 70 62.9
QL03p026982 Quercus lobata HOM05D004252 ORTHO05D005101 2.7e-17 91.7 91 57.1
AUR62001006 Chenopodium quinoa HOM05D004252 ORTHO05D005101 7.8e-17 90.1 58 77.6
Sed0025221 Sechium edule HOM05D004252 ORTHO05D005101 3.0e-16 88.2 70 64.3
SHI18417 Sapria himalayana HOM05D004252 ORTHO05D005101 3.9e-16 87.8 66 66.7
Os09g0281900 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 8.6e-16 86.7 80 57.5
Os08g0332800 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 3.3e-15 84.7 76 57.9
Zm00001eb097360 Zea mays HOM05D004252 ORTHO05D005101 4.3e-15 84.3 83 55.4
CiPaw.07G067400 Carya illinoinensis HOM05D004252 ORTHO05D005101 9.5e-15 83.2 81 58.0
Pp3c9_5080 Physcomitrium patens HOM05D004252 ORTHO05D005101 1.5e-12 75.9 64 60.9
Pp3c9_4280 Physcomitrium patens HOM05D004252 ORTHO05D005101 4.4e-12 74.3 64 59.4
SMO118G0536 Selaginella moellendorffii HOM05D004252 ORTHO05D005101 2.9e-11 71.6 68 52.9
Mapoly0110s0011 Marchantia polymorpha HOM05D004252 ORTHO05D005101 5.4e-10 67.4 67 50.7
AagrBONN_evm.TU.Sc2ySwM_368.2529 Anthoceros agrestis HOM05D004252 ORTHO05D005101 7.8e-09 63.5 67 47.8


User provided reference genes

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