Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g013090 Solanum pennellii HOM05D004092 ORTHO05D005448 3.0e-89 332.0 194 100.0
Solyc04g074090.4 Solanum lycopersicum HOM05D004092 ORTHO05D005448 1.0e-44 184.1 127 99.2
CAN.G851.30 Capsicum annuum HOM05D004092 ORTHO05D005448 3.7e-39 165.6 96 89.6
CAN.G101.17 Capsicum annuum HOM05D004092 ORTHO05D005448 7.0e-38 161.4 128 75.0
Nitab4.5_0005777g0060 Nicotiana tabacum HOM05D004092 ORTHO05D005448 1.7e-36 156.8 96 84.4
Nitab4.5_0000232g0210 Nicotiana tabacum HOM05D004092 ORTHO05D005448 6.6e-36 154.8 96 83.3
Lju337C5G4 Lonicera japonica HOM05D004092 ORTHO05D005448 3.9e-28 129.0 96 69.8
Actinidia35425 Actinidia chinensis HOM05D004092 ORTHO05D005448 1.5e-27 127.1 95 72.6
Dinv19600 Davidia involucrata HOM05D004092 ORTHO05D005448 1.5e-27 127.1 91 73.6
Hma1.2p1_0334F.1_g128560 Hydrangea macrophylla HOM05D004092 ORTHO05D005448 3.3e-27 125.9 128 75.8
Hma1.2p1_0334F.1_g128570 Hydrangea macrophylla HOM05D004092 ORTHO05D005448 3.3e-27 125.9 128 75.8
Peaxi162Scf00041g01738 Petunia axillaris HOM05D004092 ORTHO05D005448 9.5e-27 124.4 73 83.6
Rhsim04G0123500 Rhododendron simsii HOM05D004092 ORTHO05D005448 2.8e-26 122.9 96 67.7
Rhsim04G0004600 Rhododendron simsii HOM05D004092 ORTHO05D005448 3.6e-26 122.5 131 71.8
Cfa005512 Carpinus fangiana HOM05D004092 ORTHO05D005448 6.2e-26 121.7 96 65.6
vmacro09775 Vaccinium macrocarpon HOM05D004092 ORTHO05D005448 6.2e-26 121.7 127 56.7
RhsimUnG0180500 Rhododendron simsii HOM05D004092 ORTHO05D005448 8.1e-26 121.3 96 66.7
Cc05_g16260 Coffea canephora HOM05D004092 ORTHO05D005448 2.3e-25 119.8 96 66.7
CSS0013287 Camellia sinensis var. sinensis HOM05D004092 ORTHO05D005448 3.1e-25 119.4 96 67.7
GSVIVG01036806001 Vitis vinifera HOM05D004092 ORTHO05D005448 4.0e-25 119.0 97 64.9
Haze_01704 Corylus avellana HOM05D004092 ORTHO05D005448 2.0e-24 116.7 96 63.5
Prupe.4G136600 Prunus persica HOM05D004092 ORTHO05D005448 2.9e-23 112.8 96 62.5
TAR362G1264 Trochodendron aralioides HOM05D004092 ORTHO05D005448 8.4e-23 111.3 97 61.9
Atru.chr1.122 Acer truncatum HOM05D004092 ORTHO05D005448 1.4e-22 110.5 98 64.3
Aqoxy3G03661 Aquilegia oxysepala HOM05D004092 ORTHO05D005448 1.4e-22 110.5 96 60.4
Nn5g27645 Nelumbo nucifera HOM05D004092 ORTHO05D005448 1.4e-22 110.5 131 54.2
Oeu051991.1 Olea europaea HOM05D004092 ORTHO05D005448 1.4e-22 110.5 96 63.5
QL04p079824 Quercus lobata HOM05D004092 ORTHO05D005448 1.9e-22 110.2 96 60.4
QL04p080030 Quercus lobata HOM05D004092 ORTHO05D005448 1.9e-22 110.2 96 60.4
CiPaw.11G063100 Carya illinoinensis HOM05D004092 ORTHO05D005448 2.4e-22 109.8 96 60.4
Ciclev10004308m.g Citrus clementina HOM05D004092 ORTHO05D005448 4.1e-22 109.0 96 59.4
THA.LOC104808127 Tarenaya hassleriana HOM05D004092 ORTHO05D005448 1.2e-21 107.5 96 57.3
EL10Ac2g03277 Beta vulgaris HOM05D004092 ORTHO05D005448 1.6e-21 107.1 96 61.5
Manes.14G011200 Manihot esculenta HOM05D004092 ORTHO05D005448 1.6e-21 107.1 95 58.9
TWI38G0748 Tripterygium wilfordii HOM05D004092 ORTHO05D005448 2.1e-21 106.7 95 56.8
VMungo1127G2087 Vigna mungo HOM05D004092 ORTHO05D005448 1.0e-20 104.4 96 59.4
MD05G1223600 Malus domestica HOM05D004092 ORTHO05D005448 1.3e-20 104.0 97 60.8
DCAR_026669 Daucus carota HOM05D004092 ORTHO05D005448 5.1e-20 102.1 93 61.3
Sc08g0008610 Simmondsia chinensis HOM05D004092 ORTHO05D005448 5.1e-20 102.1 96 56.2
MSTRG.7071 Avicennia marina HOM05D004092 ORTHO05D005448 6.6e-20 101.7 96 58.3
Lj1g0019540 Lotus japonicus HOM05D004092 ORTHO05D005448 1.1e-19 100.9 111 52.3
MD10G1205100 Malus domestica HOM05D004092 ORTHO05D005448 1.5e-19 100.5 97 60.8
Phvul.011G076150 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 1.9e-19 100.1 111 51.4
Phvul.L001854 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 1.9e-19 100.1 111 51.4
Glyma.10G245700 Glycine max HOM05D004092 ORTHO05D005448 3.3e-19 99.4 96 55.2
Lsat_1_v5_gn_7_110180 Lactuca sativa HOM05D004092 ORTHO05D005448 3.3e-19 99.4 97 58.8
AUR62016815 Chenopodium quinoa HOM05D004092 ORTHO05D005448 7.3e-19 98.2 95 57.9
Lalb_Chr03g0031641 Lupinus albus HOM05D004092 ORTHO05D005448 9.6e-19 97.8 96 57.3
MBI18_g01899_MAGBIO Magnolia biondii HOM05D004092 ORTHO05D005448 9.6e-19 97.8 97 63.9
Ca_07696_v3 Cicer arietinum L. HOM05D004092 ORTHO05D005448 1.2e-18 97.4 96 54.2
TPR.G6646 Trifolium pratense HOM05D004092 ORTHO05D005448 1.2e-18 97.4 96 55.2
Glyma.12G070100 Glycine max HOM05D004092 ORTHO05D005448 2.1e-18 96.7 96 55.2
Lalb_Chr01g0007101 Lupinus albus HOM05D004092 ORTHO05D005448 6.2e-18 95.1 96 54.2
arahy.Tifrunner.gnm1.ann1.7JS6EV Arachis hypogaea HOM05D004092 ORTHO05D005448 8.1e-18 94.7 96 54.2
ClCG09G022650 Citrullus lanatus HOM05D004092 ORTHO05D005448 8.1e-18 94.7 96 56.2
FvH4_3g15370 Fragaria vesca HOM05D004092 ORTHO05D005448 8.1e-18 94.7 96 54.2
FAN11G0738 Fragaria x ananassa HOM05D004092 ORTHO05D005448 8.1e-18 94.7 96 54.2
Psat3g124440 Pisum sativum HOM05D004092 ORTHO05D005448 1.1e-17 94.4 111 48.6
RcHm_v2.0_Chr5g0025821 Rosa chinensis HOM05D004092 ORTHO05D005448 1.1e-17 94.4 96 54.2
MELO3C012616.2 Cucumis melo HOM05D004092 ORTHO05D005448 1.4e-17 94.0 96 56.2
arahy.Tifrunner.gnm1.ann1.R5WWIH Arachis hypogaea HOM05D004092 ORTHO05D005448 1.8e-17 93.6 96 53.1
FAN21G2977 Fragaria x ananassa HOM05D004092 ORTHO05D005448 1.8e-17 93.6 96 54.2
AUR62026892 Chenopodium quinoa HOM05D004092 ORTHO05D005448 2.4e-17 93.2 78 61.5
FAN16G3313 Fragaria x ananassa HOM05D004092 ORTHO05D005448 2.4e-17 93.2 96 54.2
CANSAT80G2562 Cannabis sativa HOM05D004092 ORTHO05D005448 3.1e-17 92.8 97 57.7
SGA_v2.0_scaffold186G40203 Striga asiatica HOM05D004092 ORTHO05D005448 4.0e-17 92.4 106 55.7
CsaV3_7G022820 Cucumis sativus L. HOM05D004092 ORTHO05D005448 6.9e-17 91.7 96 55.2
CDE01G0334 Ceratophyllum demersum HOM05D004092 ORTHO05D005448 1.2e-16 90.9 97 55.7
Duzib213G0752 Durio zibethinus HOM05D004092 ORTHO05D005448 2.6e-16 89.7 96 52.1
Sed0009567 Sechium edule HOM05D004092 ORTHO05D005448 4.4e-16 89.0 96 56.2
COL.COLO4_07946 Corchorus olitorius HOM05D004092 ORTHO05D005448 5.8e-16 88.6 96 51.0
Gohir.A13G122400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 5.8e-16 88.6 96 52.1
Gohir.D13G126400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 5.8e-16 88.6 96 51.0
Gorai.013G141600 Gossypium raimondii HOM05D004092 ORTHO05D005448 5.8e-16 88.6 96 51.0
Thecc.07G169400 Theobroma cacao HOM05D004092 ORTHO05D005448 7.6e-16 88.2 96 51.0
Actinidia37125 Actinidia chinensis HOM05D004092 ORTHO05D005448 2.2e-15 86.7 57 78.9
Migut.M01537 Erythranthe guttata HOM05D004092 ORTHO05D005448 3.8e-15 85.9 95 52.6
Eucgr.E01785 Eucalyptus grandis HOM05D004092 ORTHO05D005448 6.4e-15 85.1 100 51.0
HanXRQChr11g0335681 Helianthus annuus HOM05D004092 ORTHO05D005448 6.4e-15 85.1 105 51.4
SalBow6G0067 Salvia bowleyana HOM05D004092 ORTHO05D005448 8.4e-15 84.7 95 50.5
ECA236G4689 Erigeron canadensis HOM05D004092 ORTHO05D005448 1.9e-14 83.6 96 54.2
SalBow8G5525 Salvia bowleyana HOM05D004092 ORTHO05D005448 3.2e-14 82.8 95 51.6
Medtr7g070240 Medicago truncatula HOM05D004092 ORTHO05D005448 4.2e-14 82.4 94 50.0
unitig_32.g11083 Utricularia gibba HOM05D004092 ORTHO05D005448 4.2e-14 82.4 97 54.6
PGR044G0523 Punica granatum HOM05D004092 ORTHO05D005448 9.3e-14 81.3 97 53.6
PGR138G0002 Punica granatum HOM05D004092 ORTHO05D005448 9.3e-14 81.3 97 53.6
SalBow6G4089 Salvia bowleyana HOM05D004092 ORTHO05D005448 2.7e-13 79.7 93 48.4
HPP92_004307 Vanilla planifolia HOM05D004092 ORTHO05D005448 2.7e-13 79.7 95 46.3
Sabra05G0079500 Salix brachista HOM05D004092 ORTHO05D005448 2.3e-12 76.6 102 50.0
PSO063G0010 Papaver somniferum HOM05D004092 ORTHO05D005448 3.0e-12 76.3 86 50.0
PSO782G4649 Papaver somniferum HOM05D004092 ORTHO05D005448 3.0e-12 76.3 89 49.4
Potri.005G096900 Populus trichocarpa HOM05D004092 ORTHO05D005448 7.3e-11 71.6 99 47.5
ATR0763G063 Amborella trichopoda HOM05D004092 ORTHO05D005448 1.3e-10 70.9 92 47.8
Aa31LG4G1850 Aethionema arabicum HOM05D004092 ORTHO05D005448 1.5e-08 63.9 72 44.4
FAN25G1415 Fragaria x ananassa HOM05D004092 ORTHO05D005448 1.5e-08 63.9 68 51.5
Hma1.2p1_0468F.1_g158750 Hydrangea macrophylla HOM05D004092 ORTHO05D005448 2.0e-08 63.5 89 71.9


User provided reference genes

Program Settings