Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g012710 Solanum pennellii HOM05D004010 ORTHO05D004995 7.6e-155 550.4 275 100.0
Sopen02g031220 Solanum pennellii HOM05D004010 ORTHO05D004995 1.1e-153 546.6 272 100.0
Solyc02g086500.3 Solanum lycopersicum HOM05D004010 ORTHO05D004995 1.9e-150 535.8 272 98.5
PGSC0003DMG400012627 Solanum tuberosum HOM05D004010 ORTHO05D004995 5.7e-150 534.3 272 97.4
CAN.G473.4 Capsicum annuum HOM05D004010 ORTHO05D004995 4.1e-140 501.5 272 89.7
Nitab4.5_0002682g0110 Nicotiana tabacum HOM05D004010 ORTHO05D004995 5.2e-127 458.0 272 83.8
Peaxi162Scf00129g01535 Petunia axillaris HOM05D004010 ORTHO05D004995 3.3e-126 455.3 272 81.6
Nitab4.5_0006802g0030 Nicotiana tabacum HOM05D004010 ORTHO05D004995 1.4e-124 449.9 269 83.6
Cc07_g01810 Coffea canephora HOM05D004010 ORTHO05D004995 7.3e-81 304.7 272 57.0
Oeu006813.1 Olea europaea HOM05D004010 ORTHO05D004995 1.5e-78 297.0 275 54.5
Dinv33448 Davidia involucrata HOM05D004010 ORTHO05D004995 1.3e-77 293.9 276 55.8
Duzib187G0443 Durio zibethinus HOM05D004010 ORTHO05D004995 2.4e-76 289.7 274 53.6
CSS0029677 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 2.7e-75 286.2 275 54.5
Psat1g055320 Pisum sativum HOM05D004010 ORTHO05D004995 3.5e-75 285.8 275 53.5
Glyma.19G004700 Glycine max HOM05D004010 ORTHO05D004995 3.9e-74 282.3 275 53.8
Ca_04154_v3 Cicer arietinum L. HOM05D004010 ORTHO05D004995 5.1e-74 282.0 275 53.8
MD17G1029800 Malus domestica HOM05D004010 ORTHO05D004995 5.1e-74 282.0 272 50.0
SalBow6G2090 Salvia bowleyana HOM05D004010 ORTHO05D004995 5.1e-74 282.0 278 50.7
Lju41A39T81 Lonicera japonica HOM05D004010 ORTHO05D004995 1.9e-73 280.0 278 51.1
CSS0006564 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 4.3e-73 278.9 274 53.3
Medtr6g005010 Medicago truncatula HOM05D004010 ORTHO05D004995 9.6e-73 277.7 274 52.6
Prupe.3G290300 Prunus persica HOM05D004010 ORTHO05D004995 1.6e-72 276.9 274 51.1
QL02p075066 Quercus lobata HOM05D004010 ORTHO05D004995 2.1e-72 276.6 274 53.6
RcHm_v2.0_Chr2g0173001 Rosa chinensis HOM05D004010 ORTHO05D004995 2.1e-72 276.6 275 52.4
Sabra16G0225000 Salix brachista HOM05D004010 ORTHO05D004995 2.1e-72 276.6 275 52.0
Cfa007379 Carpinus fangiana HOM05D004010 ORTHO05D004995 2.8e-72 276.2 276 54.0
GSVIVG01032418001 Vitis vinifera HOM05D004010 ORTHO05D004995 2.8e-72 276.2 276 52.2
Ciclev10014033m.g Citrus clementina HOM05D004010 ORTHO05D004995 4.7e-72 275.4 275 51.6
Sabra16G0225700 Salix brachista HOM05D004010 ORTHO05D004995 8.1e-72 274.6 275 51.6
Lj2g0015656 Lotus japonicus HOM05D004010 ORTHO05D004995 1.1e-71 274.2 275 53.8
CANSAT64G1980 Cannabis sativa HOM05D004010 ORTHO05D004995 1.8e-71 273.5 275 52.0
MD09G1028200 Malus domestica HOM05D004010 ORTHO05D004995 1.8e-71 273.5 275 50.9
Nn4g22648 Nelumbo nucifera HOM05D004010 ORTHO05D004995 1.8e-71 273.5 276 50.7
Actinidia36109 Actinidia chinensis HOM05D004010 ORTHO05D004995 4.0e-71 272.3 275 50.5
TPR.G14085 Trifolium pratense HOM05D004010 ORTHO05D004995 5.2e-71 271.9 275 52.0
FAN05G5546 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.2e-70 270.8 273 51.6
Thecc.04G015900 Theobroma cacao HOM05D004010 ORTHO05D004995 1.5e-70 270.4 275 51.6
Phvul.004G009818 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 3.4e-70 269.2 276 53.6
Haze_14730 Corylus avellana HOM05D004010 ORTHO05D004995 9.9e-70 267.7 315 49.2
COL.COLO4_29096 Corchorus olitorius HOM05D004010 ORTHO05D004995 1.3e-69 267.3 275 53.1
MBI10_g32033_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 2.9e-69 266.2 275 53.1
FAN09G4321 Fragaria x ananassa HOM05D004010 ORTHO05D004995 3.8e-69 265.8 273 50.5
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea HOM05D004010 ORTHO05D004995 6.4e-69 265.0 275 52.7
Manes.17G113000 Manihot esculenta HOM05D004010 ORTHO05D004995 6.4e-69 265.0 275 50.5
Migut.H00083 Erythranthe guttata HOM05D004010 ORTHO05D004995 2.4e-68 263.1 278 49.3
Potri.001G346000 Populus trichocarpa HOM05D004010 ORTHO05D004995 3.2e-68 262.7 274 50.0
Gorai.006G032700 Gossypium raimondii HOM05D004010 ORTHO05D004995 7.1e-68 261.5 274 51.1
FvH4_6g51330 Fragaria vesca HOM05D004010 ORTHO05D004995 9.3e-68 261.2 273 50.5
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea HOM05D004010 ORTHO05D004995 1.2e-67 260.8 275 52.0
FAN14G1482 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.2e-67 260.8 273 50.5
Lalb_Chr24g0397171 Lupinus albus HOM05D004010 ORTHO05D004995 1.6e-67 260.4 275 51.3
Gohir.D09G028100 Gossypium hirsutum HOM05D004010 ORTHO05D004995 2.1e-67 260.0 274 50.7
PSO017G0470 Papaver somniferum HOM05D004010 ORTHO05D004995 3.5e-67 259.2 276 48.9
TWI36G0979 Tripterygium wilfordii HOM05D004010 ORTHO05D004995 3.5e-67 259.2 275 49.8
VMungo0464G1595 Vigna mungo HOM05D004010 ORTHO05D004995 3.5e-67 259.2 275 51.3
vmacro05856 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 2.3e-66 256.5 285 47.7
Prupe.3G290500 Prunus persica HOM05D004010 ORTHO05D004995 8.7e-66 254.6 288 47.2
CiPaw.03G042500 Carya illinoinensis HOM05D004010 ORTHO05D004995 2.5e-65 253.1 278 50.4
SGA_v2.0_scaffold135G34899 Striga asiatica HOM05D004010 ORTHO05D004995 7.3e-65 251.5 276 47.5
Sed0022234 Sechium edule HOM05D004010 ORTHO05D004995 1.3e-64 250.8 275 47.3
DCAR_001437 Daucus carota HOM05D004010 ORTHO05D004995 2.1e-64 250.0 258 50.8
Eucgr.I01751 Eucalyptus grandis HOM05D004010 ORTHO05D004995 1.1e-63 247.7 275 46.5
Rhsim10G0018100 Rhododendron simsii HOM05D004010 ORTHO05D004995 1.1e-63 247.7 323 42.7
CsaV3_3G042730 Cucumis sativus L. HOM05D004010 ORTHO05D004995 3.1e-63 246.1 275 46.5
PSO478G2834 Papaver somniferum HOM05D004010 ORTHO05D004995 4.0e-63 245.7 276 47.5
MELO3C009985.2 Cucumis melo HOM05D004010 ORTHO05D004995 3.4e-62 242.7 275 45.8
Aqoxy3G01154 Aquilegia oxysepala HOM05D004010 ORTHO05D004995 7.6e-62 241.5 276 46.0
ECA232G4079 Erigeron canadensis HOM05D004010 ORTHO05D004995 2.9e-61 239.6 274 46.0
HanXRQChr09g0255111 Helianthus annuus HOM05D004010 ORTHO05D004995 2.9e-61 239.6 279 46.2
AUR62043055 Chenopodium quinoa HOM05D004010 ORTHO05D004995 3.8e-61 239.2 274 47.1
Hund06718 Selenicereus undatus HOM05D004010 ORTHO05D004995 4.2e-60 235.7 287 46.0
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 5.4e-60 235.3 273 45.8
PGR142G3424 Punica granatum HOM05D004010 ORTHO05D004995 2.1e-59 233.4 275 47.6
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 2.7e-59 233.0 275 46.2
AUR62034752 Chenopodium quinoa HOM05D004010 ORTHO05D004995 3.5e-59 232.6 274 45.3
ClCG10G013960 Citrullus lanatus HOM05D004010 ORTHO05D004995 7.9e-59 231.5 279 46.2
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 1.3e-58 230.7 274 44.9
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 2.3e-58 229.9 254 47.2
EL10Ac4g08587 Beta vulgaris HOM05D004010 ORTHO05D004995 6.6e-58 228.4 276 44.2
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 8.7e-58 228.0 274 43.8
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 1.1e-57 227.6 252 45.2
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 1.1e-57 227.6 252 45.2
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 1.1e-57 227.6 252 45.2
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 1.5e-57 227.3 274 43.4
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 7.3e-57 224.9 253 45.1
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 2.1e-56 223.4 255 44.7
Phvul.004G009161 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 4.8e-56 222.2 244 52.0
TAR371G0622 Trochodendron aralioides HOM05D004010 ORTHO05D004995 1.1e-55 221.1 235 51.5
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 3.4e-54 216.1 273 42.1
Lsat_1_v5_gn_4_183480 Lactuca sativa HOM05D004010 ORTHO05D004995 6.4e-53 211.8 283 42.4
Psat2g096200 Pisum sativum HOM05D004010 ORTHO05D004995 5.6e-49 198.7 205 51.2
CDE05G1248 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 1.6e-48 197.2 275 40.0
vmacro05456 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 2.5e-44 183.3 275 40.0
ATR1158G023 Amborella trichopoda HOM05D004010 ORTHO05D004995 5.5e-44 182.2 276 40.6
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 3.0e-42 176.4 225 45.8
SEGI_20333 Sequoiadendron giganteum HOM05D004010 ORTHO05D004995 1.9e-41 173.7 288 34.0
Sc03g0007550 Simmondsia chinensis HOM05D004010 ORTHO05D004995 8.2e-40 168.3 191 50.3
Os01g0169500 Oryza sativa ssp. japonica HOM05D004010 ORTHO05D004995 2.4e-39 166.8 254 39.8
Zm00001eb123050 Zea mays HOM05D004010 ORTHO05D004995 6.5e-37 158.7 254 38.2
unitig_0.g541 Utricularia gibba HOM05D004010 ORTHO05D004995 2.7e-35 153.3 211 38.9
Phvul.004G009701 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 2.6e-30 136.7 138 52.2
SMO361G0448 Selaginella moellendorffii HOM05D004010 ORTHO05D004995 2.9e-29 133.3 259 31.7
Mapoly0001s0420 Marchantia polymorpha HOM05D004010 ORTHO05D004995 1.4e-26 124.4 273 30.4
Atru.chr6.2279 Acer truncatum HOM05D004010 ORTHO05D004995 5.3e-23 112.5 92 63.0
Atru.chr6.2280 Acer truncatum HOM05D004010 ORTHO05D004995 1.8e-18 97.4 101 53.5
Phvul.004G009000 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 3.7e-16 89.7 107 49.5
Phvul.004G009761 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 1.4e-07 61.2 49 57.1


User provided reference genes

Program Settings