Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g012230 Solanum pennellii HOM05D005363 ORTHO05D006607 1.4e-33 146.0 88 100.0
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 5.1e-12 74.3 79 62.0
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 1.1e-11 73.2 81 69.1
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 1.7e-10 69.3 78 64.1
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 2.8e-10 68.6 79 60.8
Cc06_g05450 Coffea canephora HOM05D005363 ORTHO05D006607 3.7e-10 68.2 87 57.5
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 4.8e-10 67.8 78 62.8
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 6.3e-10 67.4 78 62.8
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 6.3e-10 67.4 82 61.0
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 8.2e-10 67.0 78 62.8
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 2.4e-09 65.5 79 58.2
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 2.4e-09 65.5 77 54.5
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 3.1e-09 65.1 78 61.5
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 5.3e-09 64.3 81 59.3
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 9.1e-09 63.5 76 63.2
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 1.2e-08 63.2 70 67.1
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 1.2e-08 63.2 79 59.5
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 2.6e-08 62.0 79 62.0
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 3.4e-08 61.6 79 62.0
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 4.5e-08 61.2 79 57.0
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 1.0e-07 60.1 81 59.3
Eucgr.C01186 Eucalyptus grandis HOM05D005363 ORTHO05D006607 1.3e-07 59.7 77 57.1
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 1.7e-07 59.3 87 56.3
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 2.2e-07 58.9 85 51.8
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 2.9e-07 58.5 70 67.1
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 2.9e-07 58.5 80 57.5
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 2.9e-07 58.5 79 62.0
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 2.9e-07 58.5 85 54.1
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 5.0e-07 57.8 67 65.7
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 6.5e-07 57.4 81 53.1
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 8.5e-07 57.0 81 53.1
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 1.1e-06 56.6 79 49.4
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.1e-06 56.6 81 51.9
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 1.9e-06 55.8 79 49.4
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 3.2e-06 55.1 81 59.3
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 4.2e-06 54.7 86 52.3
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 7.2e-06 53.9 77 55.8


User provided reference genes

Program Settings