Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g011090 Solanum pennellii HOM05D004010 ORTHO05D004995 1.5e-234 815.8 421 100.0
Sopen02g031220 Solanum pennellii HOM05D004010 ORTHO05D004995 5.1e-227 790.8 411 99.3
Solyc02g086500.3 Solanum lycopersicum HOM05D004010 ORTHO05D004995 9.1e-224 780.0 411 98.1
PGSC0003DMG400012627 Solanum tuberosum HOM05D004010 ORTHO05D004995 2.4e-216 755.4 415 94.5
CAN.G473.4 Capsicum annuum HOM05D004010 ORTHO05D004995 1.2e-202 709.9 415 87.5
Nitab4.5_0002682g0110 Nicotiana tabacum HOM05D004010 ORTHO05D004995 1.2e-196 689.9 415 86.0
Nitab4.5_0006802g0030 Nicotiana tabacum HOM05D004010 ORTHO05D004995 2.2e-193 679.1 415 84.1
Peaxi162Scf00129g01535 Petunia axillaris HOM05D004010 ORTHO05D004995 1.4e-184 649.8 415 81.7
Dinv33448 Davidia involucrata HOM05D004010 ORTHO05D004995 7.8e-151 537.7 419 65.6
CSS0029677 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 4.8e-140 501.9 418 62.2
CSS0006564 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 5.3e-139 498.4 418 62.2
Oeu006813.1 Olea europaea HOM05D004010 ORTHO05D004995 9.3e-136 487.6 413 60.8
QL02p075066 Quercus lobata HOM05D004010 ORTHO05D004995 3.9e-134 482.3 419 60.9
Rhsim10G0018100 Rhododendron simsii HOM05D004010 ORTHO05D004995 2.1e-132 476.5 407 61.4
CiPaw.03G042500 Carya illinoinensis HOM05D004010 ORTHO05D004995 1.7e-129 466.8 416 57.7
Cfa007379 Carpinus fangiana HOM05D004010 ORTHO05D004995 4.9e-129 465.3 410 59.3
TAR371G0622 Trochodendron aralioides HOM05D004010 ORTHO05D004995 8.4e-129 464.5 419 59.4
Prupe.3G290300 Prunus persica HOM05D004010 ORTHO05D004995 1.1e-128 464.2 419 58.2
Thecc.04G015900 Theobroma cacao HOM05D004010 ORTHO05D004995 2.1e-127 459.9 420 57.1
Ciclev10014033m.g Citrus clementina HOM05D004010 ORTHO05D004995 4.6e-127 458.8 412 57.5
RcHm_v2.0_Chr2g0173001 Rosa chinensis HOM05D004010 ORTHO05D004995 1.3e-126 457.2 419 57.0
MD09G1028200 Malus domestica HOM05D004010 ORTHO05D004995 2.3e-126 456.4 419 56.8
Gorai.006G032700 Gossypium raimondii HOM05D004010 ORTHO05D004995 5.1e-126 455.3 412 56.6
Phvul.004G009818 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 8.7e-126 454.5 404 58.4
Phvul.004G009761 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 2.5e-125 453.0 404 58.7
CANSAT64G1980 Cannabis sativa HOM05D004010 ORTHO05D004995 4.3e-125 452.2 423 56.0
Glyma.19G004700 Glycine max HOM05D004010 ORTHO05D004995 7.4e-125 451.4 419 57.3
Gohir.D09G028100 Gossypium hirsutum HOM05D004010 ORTHO05D004995 7.4e-125 451.4 412 56.1
Potri.001G346000 Populus trichocarpa HOM05D004010 ORTHO05D004995 7.4e-125 451.4 419 56.8
Migut.H00083 Erythranthe guttata HOM05D004010 ORTHO05D004995 1.6e-124 450.3 418 57.7
ECA232G4079 Erigeron canadensis HOM05D004010 ORTHO05D004995 2.2e-124 449.9 415 57.6
FvH4_6g51330 Fragaria vesca HOM05D004010 ORTHO05D004995 2.2e-124 449.9 411 55.5
SalBow6G2090 Salvia bowleyana HOM05D004010 ORTHO05D004995 2.2e-124 449.9 418 57.9
Manes.17G113000 Manihot esculenta HOM05D004010 ORTHO05D004995 3.7e-124 449.1 421 56.5
TWI36G0979 Tripterygium wilfordii HOM05D004010 ORTHO05D004995 4.8e-124 448.7 402 56.7
Haze_14730 Corylus avellana HOM05D004010 ORTHO05D004995 1.1e-123 447.6 464 53.4
MD17G1029800 Malus domestica HOM05D004010 ORTHO05D004995 1.8e-123 446.8 419 55.8
Sabra16G0225000 Salix brachista HOM05D004010 ORTHO05D004995 4.1e-123 445.7 419 56.3
Sabra16G0225700 Salix brachista HOM05D004010 ORTHO05D004995 4.1e-123 445.7 419 56.3
Lj2g0015656 Lotus japonicus HOM05D004010 ORTHO05D004995 9.0e-123 444.5 404 57.4
VMungo0464G1595 Vigna mungo HOM05D004010 ORTHO05D004995 1.2e-122 444.1 404 57.2
SGA_v2.0_scaffold135G34899 Striga asiatica HOM05D004010 ORTHO05D004995 1.5e-122 443.7 410 58.3
Lsat_1_v5_gn_4_183480 Lactuca sativa HOM05D004010 ORTHO05D004995 7.6e-122 441.4 412 56.8
Sed0022234 Sechium edule HOM05D004010 ORTHO05D004995 7.6e-122 441.4 410 57.3
vmacro05856 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 1.0e-121 441.0 455 54.1
Phvul.004G009536 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 1.3e-121 440.7 411 56.9
Lalb_Chr24g0397171 Lupinus albus HOM05D004010 ORTHO05D004995 1.4e-120 437.2 403 55.6
Cc07_g01800 Coffea canephora HOM05D004010 ORTHO05D004995 1.9e-120 436.8 420 54.3
Medtr6g005010 Medicago truncatula HOM05D004010 ORTHO05D004995 2.5e-120 436.4 420 55.0
HanXRQChr09g0255111 Helianthus annuus HOM05D004010 ORTHO05D004995 4.2e-120 435.6 408 57.4
TPR.G14085 Trifolium pratense HOM05D004010 ORTHO05D004995 5.5e-120 435.3 400 56.2
Ca_04154_v3 Cicer arietinum L. HOM05D004010 ORTHO05D004995 1.8e-118 430.3 404 55.2
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 2.3e-118 429.9 419 53.2
Psat1g055320 Pisum sativum HOM05D004010 ORTHO05D004995 2.3e-118 429.9 404 55.0
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 3.9e-118 429.1 419 53.2
Eucgr.I01751 Eucalyptus grandis HOM05D004010 ORTHO05D004995 1.9e-117 426.8 411 56.0
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 3.3e-117 426.0 418 53.6
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 3.3e-117 426.0 418 53.6
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 3.3e-117 426.0 418 53.6
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 4.3e-117 425.6 418 54.3
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 4.3e-117 425.6 418 54.3
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 5.7e-117 425.2 418 54.3
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 1.7e-116 423.7 418 53.1
Sc03g0007550 Simmondsia chinensis HOM05D004010 ORTHO05D004995 1.7e-116 423.7 410 56.3
Aqoxy3G01154 Aquilegia oxysepala HOM05D004010 ORTHO05D004995 8.2e-116 421.4 415 55.2
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea HOM05D004010 ORTHO05D004995 1.1e-115 421.0 404 54.2
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 5.3e-115 418.7 422 51.9
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 6.9e-115 418.3 419 52.5
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 3.4e-114 416.0 419 51.8
CsaV3_3G042730 Cucumis sativus L. HOM05D004010 ORTHO05D004995 1.0e-113 414.5 412 53.4
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 1.7e-113 413.7 419 52.3
PGR142G3424 Punica granatum HOM05D004010 ORTHO05D004995 1.4e-112 410.6 419 52.7
Nn4g22648 Nelumbo nucifera HOM05D004010 ORTHO05D004995 5.5e-112 408.7 421 54.4
MELO3C009985.2 Cucumis melo HOM05D004010 ORTHO05D004995 3.6e-111 406.0 414 53.1
DCAR_001437 Daucus carota HOM05D004010 ORTHO05D004995 6.7e-110 401.7 421 52.0
PSO478G2834 Papaver somniferum HOM05D004010 ORTHO05D004995 2.2e-108 396.7 425 51.3
PSO017G0470 Papaver somniferum HOM05D004010 ORTHO05D004995 2.8e-108 396.4 425 51.1
ClCG10G013960 Citrullus lanatus HOM05D004010 ORTHO05D004995 3.7e-108 396.0 414 52.7
Hund06718 Selenicereus undatus HOM05D004010 ORTHO05D004995 5.9e-106 388.7 418 49.5
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea HOM05D004010 ORTHO05D004995 2.9e-105 386.3 404 51.5
AUR62043055 Chenopodium quinoa HOM05D004010 ORTHO05D004995 5.3e-99 365.5 401 48.9
EL10Ac4g08587 Beta vulgaris HOM05D004010 ORTHO05D004995 9.1e-99 364.8 402 49.0
Atru.chr6.2370 Acer truncatum HOM05D004010 ORTHO05D004995 1.0e-97 361.3 329 58.1
ATR1158G023 Amborella trichopoda HOM05D004010 ORTHO05D004995 1.7e-92 344.0 401 47.6
Actinidia36110 Actinidia chinensis HOM05D004010 ORTHO05D004995 3.5e-90 336.3 268 63.8
Lju41A39T81 Lonicera japonica HOM05D004010 ORTHO05D004995 4.2e-88 329.3 300 56.7
FAN14G1482 Fragaria x ananassa HOM05D004010 ORTHO05D004995 3.0e-86 323.2 411 43.6
FAN09G4321 Fragaria x ananassa HOM05D004010 ORTHO05D004995 5.2e-86 322.4 411 44.0
FAN05G5546 Fragaria x ananassa HOM05D004010 ORTHO05D004995 2.0e-85 320.5 411 43.6
MBI10_g32033_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 9.8e-85 318.2 412 46.6
Os01g0169500 Oryza sativa ssp. japonica HOM05D004010 ORTHO05D004995 9.8e-85 318.2 396 45.2
Zm00001eb123050 Zea mays HOM05D004010 ORTHO05D004995 5.5e-80 302.4 399 43.9
AUR62034752 Chenopodium quinoa HOM05D004010 ORTHO05D004995 2.0e-77 293.9 344 48.3
Phvul.007G113156 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 2.6e-77 293.5 261 60.9
CSS0026540 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 5.6e-72 275.8 253 55.3
Cpa.g.sc108.58 Carica papaya HOM05D004010 ORTHO05D004995 2.1e-71 273.9 415 40.7
vmacro05456 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 3.5e-66 256.5 298 48.3
Phvul.004G009161 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 8.6e-65 251.9 246 52.8
Phvul.004G009109 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 1.2e-63 248.1 246 52.4
Actinidia15573 Actinidia chinensis HOM05D004010 ORTHO05D004995 3.6e-63 246.5 246 53.3
Duzib187G0443 Durio zibethinus HOM05D004010 ORTHO05D004995 8.9e-54 215.3 364 40.9
GSVIVG01032418001 Vitis vinifera HOM05D004010 ORTHO05D004995 5.8e-53 212.6 151 72.2
CDE05G1248 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 6.2e-47 192.6 250 44.0
Lju41A39G70 Lonicera japonica HOM05D004010 ORTHO05D004995 4.4e-45 186.4 121 76.0
Mapoly0001s0420 Marchantia polymorpha HOM05D004010 ORTHO05D004995 2.1e-39 167.5 413 31.5
Actinidia36109 Actinidia chinensis HOM05D004010 ORTHO05D004995 4.3e-32 143.3 113 61.1
SMO361G0448 Selaginella moellendorffii HOM05D004010 ORTHO05D004995 9.6e-32 142.1 383 29.8
RcHm_v2.0_Chr5g0081041 Rosa chinensis HOM05D004010 ORTHO05D004995 1.2e-29 135.2 181 44.8
vmacro05455 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 1.4e-27 128.3 194 42.8
Phvul.007G112678 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 2.5e-24 117.5 98 57.1
FvH4_5g31861 Fragaria vesca HOM05D004010 ORTHO05D046033 7.4e-24 115.9 84 67.9
CBR_g19445 Chara braunii HOM05D004010 ORTHO05D004995 1.1e-19 102.1 470 22.6
Atru.chr6.2371 Acer truncatum HOM05D004010 ORTHO05D004995 9.3e-19 99.0 79 58.2
RcHm_v2.0_Chr4g0387881 Rosa chinensis HOM05D004010 ORTHO05D343204 3.2e-11 73.9 121 34.7
COL.COLO4_29097 Corchorus olitorius HOM05D004010 ORTHO05D004995 4.2e-11 73.6 60 65.0
RcHm_v2.0_Chr4g0403131 Rosa chinensis HOM05D003776 ORTHO05D004459 8.7e-09 65.9 42 73.8
RcHm_v2.0_Chr4g0403161 Rosa chinensis HOM05D003776 ORTHO05D004459 8.7e-09 65.9 42 73.8
RcHm_v2.0_Chr3g0488481 Rosa chinensis HOM05D004010 ORTHO05D004995 3.3e-08 63.9 122 33.6
CDE05G1902 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 2.8e-07 60.8 60 50.0


User provided reference genes

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