Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 5.5e-85 317.8 181 100.0
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-80 303.1 181 88.4
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 3.3e-74 282.0 173 83.8
Sopen10g014360 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-71 273.5 162 88.3
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 3.5e-71 271.9 168 92.9
Sopen02g001050 Solanum pennellii HOM05D007930 ORTHO05D007166 4.5e-71 271.6 162 92.6
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 7.7e-71 270.8 162 87.0
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 1.0e-70 270.4 162 95.7
Sopen01g016030 Solanum pennellii HOM05D000014 ORTHO05D000016 5.0e-70 268.1 175 81.1
Sopen05g019850 Solanum pennellii HOM05D007930 ORTHO05D007166 8.5e-70 267.3 163 85.9
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 2.5e-69 265.8 175 90.3
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 3.2e-69 265.4 175 82.3
Sopen08g007710 Solanum pennellii HOM05D007930 ORTHO05D007166 7.2e-69 264.2 162 85.2
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 2.1e-68 262.7 162 84.6
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 1.7e-65 253.1 160 84.4
Sopen08g011060 Solanum pennellii HOM05D007930 ORTHO05D007166 3.7e-65 251.9 157 82.8
Sopen05g026070 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-64 249.6 163 79.8
Sopen11g021520 Solanum pennellii HOM05D007930 ORTHO05D007166 7.0e-64 247.7 164 81.1
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 7.0e-64 247.7 160 80.0
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-59 233.4 142 86.6
Sopen05g025930 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-59 233.0 165 75.2
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 4.0e-59 231.9 142 85.9
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 2.2e-57 226.1 187 73.3
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 4.8e-57 224.9 186 73.7
Sopen01g007980 Solanum pennellii HOM05D007930 ORTHO05D007166 3.5e-55 218.8 135 83.0
Sopen10g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 7.7e-55 217.6 183 66.1
Sopen11g012950 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-53 213.4 128 85.9
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 3.6e-52 208.8 127 85.0
Sopen06g016400 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-50 203.4 164 69.5
Sopen03g018540 Solanum pennellii HOM05D007930 ORTHO05D007166 2.8e-49 199.1 123 82.9
Sopen09g008030 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-45 187.2 159 73.0
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 2.5e-45 186.0 115 87.8
PGSC0003DMG400041847 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.8e-44 182.6 175 60.0
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 2.6e-42 176.0 109 83.5
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 5.7e-42 174.9 116 79.3
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 5.7e-42 174.9 109 82.6
PGSC0003DMG400042507 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.7e-41 173.3 116 77.6
Sopen02g002760 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-38 163.7 89 94.4
Sopen02g002790 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-37 160.2 91 87.9
PGSC0003DMG400043538 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.7e-36 155.2 101 79.2
PGSC0003DMG400046611 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.7e-36 155.2 127 65.4
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 3.4e-34 149.1 139 67.6
PGSC0003DMG400009722 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.4e-34 148.7 175 52.0
Sopen08g014730 Solanum pennellii HOM05D007930 ORTHO05D007166 3.2e-32 142.5 91 78.0
PGSC0003DMG400045026 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.0e-30 136.0 133 57.1
Sopen07g010680 Solanum pennellii HOM05D007930 ORTHO05D007166 6.6e-30 134.8 173 56.1
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 2.1e-28 129.8 70 95.7
PGSC0003DMG400044598 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.1e-28 129.8 77 81.8
PGSC0003DMG400044440 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.1e-27 127.5 129 57.4
Sopen03g016440 Solanum pennellii HOM05D007930 ORTHO05D007166 2.6e-26 122.9 84 81.0
Sopen04g019050 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-25 119.8 69 87.0
PGSC0003DMG400046823 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.4e-24 116.3 63 92.1
Sopen01g024790 Solanum pennellii HOM05D007930 ORTHO05D007166 3.3e-21 105.9 84 83.3
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 2.1e-20 103.2 151 37.7
PGSC0003DMG400038760 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.6e-20 102.4 65 78.5
Psat3g053800 Pisum sativum HOM05D009811 ORTHO05D007166 1.4e-19 100.5 160 38.8
Sopen09g017090 Solanum pennellii HOM05D007930 ORTHO05D009932 1.8e-19 100.1 53 92.5
Psat4g079480 Pisum sativum HOM05D009811 ORTHO05D007166 2.3e-19 99.8 169 37.9
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 1.2e-18 97.4 160 38.1
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 3.4e-18 95.9 141 39.0
Sopen12g018720 Solanum pennellii HOM05D007930 ORTHO05D007166 3.4e-18 95.9 57 84.2
Ca_13632_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 4.4e-18 95.5 103 48.5
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 4.4e-18 95.5 153 35.9
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 7.5e-18 94.7 105 49.5
PGSC0003DMG400046364 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.9e-17 92.8 122 53.3
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 3.7e-17 92.4 101 45.5
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 3.7e-17 92.4 101 45.5
Sopen01g021130 Solanum pennellii HOM05D007930 ORTHO05D007166 6.4e-17 91.7 157 39.5
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 8.3e-17 91.3 159 37.7
Psat5g082960 Pisum sativum HOM05D008859 ORTHO05D007166 3.2e-16 89.4 101 44.6
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 4.1e-16 89.0 102 46.1
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 1.2e-15 87.4 101 43.6
Sopen01g009500 Solanum pennellii HOM05D007930 ORTHO05D007166 2.1e-15 86.7 76 60.5
PGSC0003DMG400047111 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.5e-15 85.9 53 77.4
arahy.Tifrunner.gnm1.ann1.AC3I93 Arachis hypogaea HOM05D007930 ORTHO05D011783 7.8e-15 84.7 147 38.1
Psat7g163400 Pisum sativum HOM05D008859 ORTHO05D007166 1.7e-14 83.6 93 44.1
Sopen08g007420 Solanum pennellii HOM05D007930 ORTHO05D007166 1.7e-14 83.6 50 86.0
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.9e-14 82.4 100 43.0
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 3.9e-14 82.4 103 39.8
Ca_14008_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 5.1e-14 82.0 99 42.4
Ca_03071_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 1.5e-13 80.5 91 45.1
Ca_05541_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 2.8e-12 76.3 90 43.3
Sopen12g025620 Solanum pennellii HOM05D007930 ORTHO05D012342 1.1e-11 74.3 46 82.6
PGSC0003DMG400045048 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.4e-11 73.2 49 75.5
Lj3g0009883 Lotus japonicus HOM05D008859 ORTHO05D007166 4.0e-11 72.4 91 40.7
Medtr6g043310 Medicago truncatula HOM05D008859 ORTHO05D007166 9.9e-10 67.8 147 41.5
Phvul.010G109450 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 9.9e-10 67.8 116 37.9
PGSC0003DMG400043533 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.2e-09 66.6 37 89.2
Psat1g076560 Pisum sativum HOM05D009811 ORTHO05D007166 6.4e-09 65.1 98 41.8
Psat6g116840 Pisum sativum HOM05D008859 ORTHO05D007166 6.4e-09 65.1 50 54.0
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 1.9e-08 63.5 92 38.0
Sopen02g002150 Solanum pennellii HOM05D000107 ORTHO05D000062 2.4e-08 63.2 33 97.0
PGSC0003DMG400014072 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.2e-08 62.8 38 78.9
Sopen12g011410 Solanum pennellii HOM05D007930 ORTHO05D007166 4.2e-08 62.4 37 83.8
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 5.4e-08 62.0 75 42.7
TPR.G17520 Trifolium pratense HOM05D008859 ORTHO05D007166 5.4e-08 62.0 73 41.1
Medtr3g055517 Medicago truncatula HOM05D007930 ORTHO05D030188 7.1e-08 61.6 83 41.0
Sopen11g023140 Solanum pennellii HOM05D000107 ORTHO05D000062 7.1e-08 61.6 38 84.2
TPR.G18975 Trifolium pratense HOM05D007930 ORTHO05D030188 9.3e-08 61.2 83 39.8
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.2e-07 60.8 93 37.6
PGSC0003DMG400023207 Solanum tuberosum HOM05D007930 ORTHO05D003213 2.1e-07 60.1 93 43.0
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 3.5e-07 59.3 93 37.6
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 4.6e-07 58.9 108 34.3
Psat5g249440 Pisum sativum HOM05D009811 ORTHO05D007166 6.0e-07 58.5 102 34.3
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 1.7e-06 57.0 111 34.2
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 3.0e-06 56.2 195 29.7
Medtr6g088780 Medicago truncatula HOM05D008859 ORTHO05D007166 3.0e-06 56.2 123 39.0
Sopen11g018790 Solanum pennellii HOM05D007930 ORTHO05D007166 3.0e-06 56.2 30 83.3
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 3.9e-06 55.8 93 36.6
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.1e-06 55.5 93 34.4
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 5.1e-06 55.5 113 32.7


User provided reference genes

Program Settings