Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g005880 Solanum pennellii HOM05D003290 ORTHO05D003866 3.8e-70 268.1 139 100.0
Sopen04g009320 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-58 228.0 118 100.0
Solyc04g018100.4 Solanum lycopersicum HOM05D003290 ORTHO05D003866 1.2e-55 219.9 125 92.0
CAN.G1237.29 Capsicum annuum HOM05D003290 ORTHO05D003866 1.1e-45 186.8 125 81.6
Peaxi162Scf00130g01216 Petunia axillaris HOM05D003290 ORTHO05D003866 9.2e-40 167.2 116 75.0
Nitab4.5_0009873g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 5.6e-37 157.9 156 58.3
arahy.Tifrunner.gnm1.ann1.P8F85A Arachis hypogaea HOM05D003290 ORTHO05D003866 1.5e-13 80.1 122 41.8
arahy.Tifrunner.gnm1.ann1.4ZG746 Arachis hypogaea HOM05D003290 ORTHO05D003866 3.3e-13 79.0 122 41.0
arahy.Tifrunner.gnm1.ann1.GST19D Arachis hypogaea HOM05D003290 ORTHO05D003866 3.3e-13 79.0 122 41.0
CANSAT78G1043 Cannabis sativa HOM05D003290 ORTHO05D003866 3.3e-13 79.0 122 38.5
Cfa015081 Carpinus fangiana HOM05D003290 ORTHO05D003866 7.3e-13 77.8 125 39.2
CiPaw.05G160100 Carya illinoinensis HOM05D003290 ORTHO05D003866 9.6e-13 77.4 125 37.6
Lj4g0008630 Lotus japonicus HOM05D003290 ORTHO05D003866 9.6e-13 77.4 116 37.1
Lj4g0019755 Lotus japonicus HOM05D003290 ORTHO05D003866 2.8e-12 75.9 122 38.5
CiPaw.05G159900 Carya illinoinensis HOM05D003290 ORTHO05D003866 3.6e-12 75.5 126 38.1
Lalb_Chr13g0293001 Lupinus albus HOM05D003290 ORTHO05D003866 3.6e-12 75.5 122 39.3
Psat7g085560 Pisum sativum HOM05D003290 ORTHO05D003866 4.8e-12 75.1 122 39.3
TAR629G0420 Trochodendron aralioides HOM05D003290 ORTHO05D003866 4.8e-12 75.1 118 42.4
GSVIVG01011573001 Vitis vinifera HOM05D003290 ORTHO05D003866 6.2e-12 74.7 124 39.5
Oeu005355.3 Olea europaea HOM05D003290 ORTHO05D005991 8.1e-12 74.3 116 39.7
Potri.008G140700 Populus trichocarpa HOM05D003290 ORTHO05D003866 8.1e-12 74.3 123 39.0
Sed0007344 Sechium edule HOM05D003290 ORTHO05D003866 8.1e-12 74.3 123 37.4
Potri.010G100900 Populus trichocarpa HOM05D003290 ORTHO05D003866 1.1e-11 73.9 122 36.9
Nn4g24593 Nelumbo nucifera HOM05D003290 ORTHO05D003866 1.4e-11 73.6 117 37.6
QL03p039662 Quercus lobata HOM05D003290 ORTHO05D003866 1.4e-11 73.6 117 37.6
ATR0598G076 Amborella trichopoda HOM05D003290 ORTHO05D003866 1.8e-11 73.2 124 39.5
THA.LOC104805106 Tarenaya hassleriana HOM05D003290 ORTHO05D003866 2.4e-11 72.8 124 35.5
Aqoxy3G04046 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 3.1e-11 72.4 122 39.3
Dinv07020 Davidia involucrata HOM05D003290 ORTHO05D003866 5.3e-11 71.6 123 39.0
Eucgr.G02062 Eucalyptus grandis HOM05D003290 ORTHO05D003866 5.3e-11 71.6 123 39.0
TWI56G1413 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 5.3e-11 71.6 124 37.9
Nitab4.5_0001529g0040 Nicotiana tabacum HOM05D003290 ORTHO05D003866 6.9e-11 71.2 117 36.8
Nitab4.5_0007122g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 6.9e-11 71.2 117 36.8
Sc03g0005960 Simmondsia chinensis HOM05D003290 ORTHO05D003866 6.9e-11 71.2 118 38.1
PSO170G6380 Papaver somniferum HOM05D003290 ORTHO05D003866 9.0e-11 70.9 125 33.6
Haze_10795 Corylus avellana HOM05D003290 ORTHO05D003866 1.5e-10 70.1 95 43.2
PGR142G0945 Punica granatum HOM05D003290 ORTHO05D003866 1.5e-10 70.1 123 37.4
Cpa.g.sc2.68 Carica papaya HOM05D003290 ORTHO05D003866 2.0e-10 69.7 95 44.2
Glyma.08G092000 Glycine max HOM05D003290 ORTHO05D003866 2.0e-10 69.7 119 39.5
CAN.G282.93 Capsicum annuum HOM05D003290 ORTHO05D003866 2.6e-10 69.3 117 36.8
Ca_18198_v3 Cicer arietinum L. HOM05D003290 ORTHO05D003866 2.6e-10 69.3 122 38.5
Solyc01g005020.3 Solanum lycopersicum HOM05D003290 ORTHO05D003866 2.6e-10 69.3 117 35.0
Sopen01g001090 Solanum pennellii HOM05D003290 ORTHO05D003866 2.6e-10 69.3 117 35.0
Peaxi162Scf00349g00111 Petunia axillaris HOM05D003290 ORTHO05D003866 3.4e-10 68.9 115 35.7
Sabra08G0106800 Salix brachista HOM05D003290 ORTHO05D003866 3.4e-10 68.9 123 37.4
TWI74G0523 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 3.4e-10 68.9 124 38.7
CsaV3_5G017250 Cucumis sativus L. HOM05D003290 ORTHO05D003866 4.4e-10 68.6 124 37.1
Migut.E00570 Erythranthe guttata HOM05D003290 ORTHO05D003866 5.8e-10 68.2 116 37.9
TPR.G11847 Trifolium pratense HOM05D003290 ORTHO05D003866 5.8e-10 68.2 122 36.9
COL.COLO4_27555 Corchorus olitorius HOM05D003290 ORTHO05D003866 7.6e-10 67.8 79 46.8
Phvul.002G185150 Phaseolus vulgaris HOM05D003290 ORTHO05D003866 9.9e-10 67.4 121 38.8
PGSC0003DMG400022786 Solanum tuberosum HOM05D003290 ORTHO05D003866 9.9e-10 67.4 117 34.2
Ah.03g147350 Amaranthus hybridus HOM05D003290 ORTHO05D003866 1.3e-09 67.0 132 33.3
Gohir.D02G138100 Gossypium hirsutum HOM05D003290 ORTHO05D003866 1.3e-09 67.0 134 33.6
Gorai.005G154600 Gossypium raimondii HOM05D003290 ORTHO05D003866 1.3e-09 67.0 134 33.6
PSO170G2638 Papaver somniferum HOM05D003290 ORTHO05D003866 1.3e-09 67.0 126 32.5
MSTRG.2101 Avicennia marina HOM05D003290 ORTHO05D003866 2.2e-09 66.2 117 40.2
DCAR_030318 Daucus carota HOM05D003290 ORTHO05D003866 2.2e-09 66.2 117 35.9
Rhsim09G0082800 Rhododendron simsii HOM05D003290 ORTHO05D003866 2.2e-09 66.2 99 41.4
unitig_699.g19544 Utricularia gibba HOM05D003290 ORTHO05D003866 2.2e-09 66.2 117 37.6
HPP92_016411 Vanilla planifolia HOM05D003290 ORTHO05D003866 2.2e-09 66.2 124 37.1
CSS0011262 Camellia sinensis var. sinensis HOM05D003290 ORTHO05D003866 2.9e-09 65.9 117 36.8
Lj6C728G5 Lonicera japonica HOM05D003290 ORTHO05D003866 2.9e-09 65.9 116 34.5
Ciclev10015265m.g Citrus clementina HOM05D003290 ORTHO05D003866 3.8e-09 65.5 123 38.2
PSO017G1263 Papaver somniferum HOM05D003290 ORTHO05D003866 3.8e-09 65.5 139 36.0
Cc11_g05260 Coffea canephora HOM05D003290 ORTHO05D003866 4.9e-09 65.1 118 33.9
DCAR_030317 Daucus carota HOM05D003290 ORTHO05D003866 4.9e-09 65.1 123 35.8
Hma1.2p1_0197F.1_g085170 Hydrangea macrophylla HOM05D003290 ORTHO05D003866 4.9e-09 65.1 117 35.9
VMungo0251G2069 Vigna mungo HOM05D003290 ORTHO05D003866 4.9e-09 65.1 120 37.5
Actinidia12429 Actinidia chinensis HOM05D003290 ORTHO05D003866 6.4e-09 64.7 125 36.8
MELO3C005228.2 Cucumis melo HOM05D003290 ORTHO05D003866 6.4e-09 64.7 124 37.1
unitig_27.g25301 Utricularia gibba HOM05D003290 ORTHO05D003866 8.4e-09 64.3 121 33.9
CAN.G282.94 Capsicum annuum HOM05D003290 ORTHO05D003866 1.1e-08 63.9 117 34.2
AUR62003491 Chenopodium quinoa HOM05D003290 ORTHO05D003866 1.4e-08 63.5 121 38.0
Eucgr.B02635 Eucalyptus grandis HOM05D003290 ORTHO05D003866 1.4e-08 63.5 127 37.8
MBI13_g17879_MAGBIO Magnolia biondii HOM05D003290 ORTHO05D003866 1.4e-08 63.5 121 34.7
AUR62017800 Chenopodium quinoa HOM05D003290 ORTHO05D003866 1.9e-08 63.2 121 38.0
vmacro10756 Vaccinium macrocarpon HOM05D003290 ORTHO05D003866 1.9e-08 63.2 79 46.8
FAN22G1284 Fragaria x ananassa HOM05D003290 ORTHO05D003866 2.4e-08 62.8 132 35.6
Gohir.A03G113800 Gossypium hirsutum HOM05D003290 ORTHO05D003866 2.4e-08 62.8 134 32.1
PSO729G0139 Papaver somniferum HOM05D003290 ORTHO05D003866 2.4e-08 62.8 125 31.2
Aqoxy4G00109 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 4.2e-08 62.0 128 33.6
ECA234G2339 Erigeron canadensis HOM05D003290 ORTHO05D003866 4.2e-08 62.0 120 34.2
HanXRQChr15g0469331 Helianthus annuus HOM05D003290 ORTHO05D003866 4.2e-08 62.0 78 41.0
Lsat_1_v5_gn_5_35481 Lactuca sativa HOM05D003290 ORTHO05D003866 4.2e-08 62.0 121 37.2
PSO339G1388 Papaver somniferum HOM05D003290 ORTHO05D003866 4.2e-08 62.0 125 32.0
Prupe.1G339200 Prunus persica HOM05D003290 ORTHO05D003866 4.2e-08 62.0 123 35.0
EL10Ac6g15381 Beta vulgaris HOM05D003290 ORTHO05D003866 5.4e-08 61.6 117 35.0
Atru.chr11.983 Acer truncatum HOM05D003290 ORTHO05D003866 7.1e-08 61.2 122 36.1
Thecc.02G301400 Theobroma cacao HOM05D003290 ORTHO05D003866 7.1e-08 61.2 101 40.6
SGA_v2.0_scaffold348G49593 Striga asiatica HOM05D003290 ORTHO05D003866 9.3e-08 60.8 118 37.3
Duzib268G0109 Durio zibethinus HOM05D003290 ORTHO05D003866 1.2e-07 60.5 109 31.2
Manes.15G139900 Manihot esculenta HOM05D003290 ORTHO05D003866 1.2e-07 60.5 126 34.1
Aa31LG2G7940 Aethionema arabicum HOM05D003290 ORTHO05D003866 2.1e-07 59.7 124 34.7
ClCG01G006860 Citrullus lanatus HOM05D003290 ORTHO05D003866 2.1e-07 59.7 79 44.3
HanXRQChr12g0381631 Helianthus annuus HOM05D003290 ORTHO05D003866 3.5e-07 58.9 79 41.8
FAN12G1356 Fragaria x ananassa HOM05D003290 ORTHO05D003866 7.9e-07 57.8 132 34.1
Manes.17G091100 Manihot esculenta HOM05D003290 ORTHO05D003866 7.9e-07 57.8 129 32.6
RcHm_v2.0_Chr4g0445491 Rosa chinensis HOM05D003290 ORTHO05D003866 1.0e-06 57.4 105 38.1
SEGI_28338 Sequoiadendron giganteum HOM05D003290 ORTHO05D003866 1.0e-06 57.4 114 29.8
BcaB07g30722 Brassica carinata HOM05D003290 ORTHO05D003866 2.3e-06 56.2 119 31.9
PGR102G1943 Punica granatum HOM05D003290 ORTHO05D003866 3.0e-06 55.8 116 39.7
FvH4_4g35880 Fragaria vesca HOM05D003290 ORTHO05D003866 5.1e-06 55.1 132 33.3
FAN07G0883 Fragaria x ananassa HOM05D003290 ORTHO05D003866 8.7e-06 54.3 131 32.8


User provided reference genes

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