Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g004580 Solanum pennellii HOM05D000361 ORTHO05D020223 1.5e-80 302.8 150 100.0
Sopen00g004590 Solanum pennellii HOM05D000361 ORTHO05D020223 1.5e-80 302.8 150 100.0
CAN.G809.9 Capsicum annuum HOM05D000361 ORTHO05D008294 2.2e-71 272.3 138 95.7
Sopen02g026840 Solanum pennellii HOM05D000361 ORTHO05D008294 3.7e-71 271.6 138 97.8
PGSC0003DMG400013633 Solanum tuberosum HOM05D000361 ORTHO05D008294 1.1e-70 270.0 138 97.1
Solyc02g082180.3 Solanum lycopersicum HOM05D000361 ORTHO05D008294 1.4e-70 269.6 138 97.1
Nitab4.5_0007687g0010 Nicotiana tabacum HOM05D000361 ORTHO05D008294 3.5e-69 265.0 138 95.7
Peaxi162Scf00036g00321 Petunia axillaris HOM05D000361 ORTHO05D008294 6.6e-68 260.8 138 94.9
Nitab4.5_0001815g0090 Nicotiana tabacum HOM05D000361 ORTHO05D008294 7.3e-67 257.3 138 94.2
Cc09_g04600 Coffea canephora HOM05D000361 ORTHO05D008294 6.2e-66 254.2 138 88.4
Lsat_1_v5_gn_9_100181 Lactuca sativa HOM05D000361 ORTHO05D008294 3.7e-63 245.0 138 87.0
Dinv07937 Davidia involucrata HOM05D000361 ORTHO05D008294 4.9e-63 244.6 138 86.2
Dinv18416 Davidia involucrata HOM05D000361 ORTHO05D008294 4.9e-63 244.6 138 86.2
CSS0044464 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008294 7.1e-62 240.7 138 84.1
Lj1C1152G4 Lonicera japonica HOM05D000361 ORTHO05D008294 3.5e-61 238.4 138 84.8
Rhsim13G0136200 Rhododendron simsii HOM05D000361 ORTHO05D008294 4.6e-61 238.0 138 84.8
HanXRQChr07g0187741 Helianthus annuus HOM05D000361 ORTHO05D008294 2.3e-60 235.7 138 84.1
Oeu039911.1 Olea europaea HOM05D000361 ORTHO05D008294 1.6e-58 229.6 138 81.2
TAR627G0013 Trochodendron aralioides HOM05D000361 ORTHO05D008294 3.6e-58 228.4 138 80.4
MSTRG.13294 Avicennia marina HOM05D000361 ORTHO05D008294 6.2e-58 227.6 141 78.0
vmacro03573 Vaccinium macrocarpon HOM05D000361 ORTHO05D008294 8.1e-58 227.3 129 85.3
Sc24g0002810 Simmondsia chinensis HOM05D000361 ORTHO05D008294 2.4e-57 225.7 138 81.9
Cpa.g.sc30.68 Carica papaya HOM05D000361 ORTHO05D008294 4.0e-57 224.9 132 82.6
Hund20134 Selenicereus undatus HOM05D000361 ORTHO05D008294 5.2e-57 224.6 138 79.0
Nn1g09868 Nelumbo nucifera HOM05D000361 ORTHO05D008294 6.8e-57 224.2 138 77.5
ECA240G0581 Erigeron canadensis HOM05D000361 ORTHO05D008294 4.4e-56 221.5 138 78.3
Migut.H01418 Erythranthe guttata HOM05D000361 ORTHO05D008294 4.4e-56 221.5 141 75.9
Manes.16G060200 Manihot esculenta HOM05D000361 ORTHO05D008294 1.1e-54 216.9 140 77.9
QL11p010760 Quercus lobata HOM05D000361 ORTHO05D008294 1.1e-54 216.9 132 78.8
PSO675G8445 Papaver somniferum HOM05D000361 ORTHO05D008294 1.4e-54 216.5 138 74.6
PSO541G2719 Papaver somniferum HOM05D000361 ORTHO05D008294 3.2e-54 215.3 138 74.6
GSVIVG01003253001 Vitis vinifera HOM05D000361 ORTHO05D008294 4.1e-54 214.9 133 78.9
CiPaw.09G140700 Carya illinoinensis HOM05D000361 ORTHO05D008294 1.6e-53 213.0 134 79.1
Cfa001165 Carpinus fangiana HOM05D000361 ORTHO05D008294 2.7e-53 212.2 134 78.4
Potri.001G074000 Populus trichocarpa HOM05D000361 ORTHO05D008294 2.7e-53 212.2 141 74.5
arahy.Tifrunner.gnm1.ann1.QR0DXW Arachis hypogaea HOM05D000361 ORTHO05D008294 3.5e-53 211.8 138 76.8
SGA_v2.0_scaffold341G49368 Striga asiatica HOM05D000361 ORTHO05D008294 7.8e-53 210.7 140 73.6
Sabra01G0052300 Salix brachista HOM05D000361 ORTHO05D008294 1.0e-52 210.3 141 74.5
Haze_05186 Corylus avellana HOM05D000361 ORTHO05D008294 1.3e-52 209.9 134 76.9
arahy.Tifrunner.gnm1.ann1.76Y6MV Arachis hypogaea HOM05D000361 ORTHO05D008294 1.7e-52 209.5 138 76.1
Medtr8g090000 Medicago truncatula HOM05D000361 ORTHO05D008294 1.7e-52 209.5 132 77.3
Psat7g056760 Pisum sativum HOM05D000361 ORTHO05D008294 2.3e-52 209.1 132 77.3
Sed0009371 Sechium edule HOM05D000361 ORTHO05D008294 2.3e-52 209.1 138 72.5
TPR.G6256 Trifolium pratense HOM05D000361 ORTHO05D008294 2.3e-52 209.1 132 77.3
Ca_17753_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008294 3.0e-52 208.8 138 74.6
Ciclev10014269m.g Citrus clementina HOM05D000361 ORTHO05D008294 3.9e-52 208.4 133 78.2
Ah.15g091830 Amaranthus hybridus HOM05D000361 ORTHO05D008294 5.1e-52 208.0 132 77.3
Aqoxy1G01354 Aquilegia oxysepala HOM05D000361 ORTHO05D008294 1.1e-51 206.8 130 74.6
Lalb_Chr18g0051851 Lupinus albus HOM05D000361 ORTHO05D008294 1.1e-51 206.8 132 77.3
SalBow6G5453 Salvia bowleyana HOM05D000361 ORTHO05D008294 1.1e-51 206.8 134 73.1
CANSAT35G1399 Cannabis sativa HOM05D000361 ORTHO05D008294 1.5e-51 206.5 138 71.7
TWI63G1117 Tripterygium wilfordii HOM05D000361 ORTHO05D008294 2.5e-51 205.7 132 74.2
Duzib132G1205 Durio zibethinus HOM05D000361 ORTHO05D008294 3.3e-51 205.3 140 74.3
ClCG01G025960 Citrullus lanatus HOM05D000361 ORTHO05D008294 7.3e-51 204.1 138 71.0
Aa31LG9G8530 Aethionema arabicum HOM05D000361 ORTHO05D008294 1.2e-50 203.4 132 72.0
HPP92_000506 Vanilla planifolia HOM05D000361 ORTHO05D008294 1.2e-50 203.4 143 70.6
CsaV3_6G053180 Cucumis sativus L. HOM05D000361 ORTHO05D008294 2.8e-50 202.2 138 69.6
AL8G14990 Arabidopsis lyrata HOM05D000361 ORTHO05D008294 3.6e-50 201.8 132 72.0
AT5G44635 Arabidopsis thaliana HOM05D000361 ORTHO05D008294 3.6e-50 201.8 132 72.0
Carub.0008s0363 Capsella rubella HOM05D000361 ORTHO05D008294 3.6e-50 201.8 132 72.0
SalBow6G3398 Salvia bowleyana HOM05D000361 ORTHO05D008294 3.6e-50 201.8 136 70.6
Eucgr.D00002 Eucalyptus grandis HOM05D000361 ORTHO05D008294 6.2e-50 201.1 131 74.0
unitig_37.g13054 Utricularia gibba HOM05D000361 ORTHO05D008294 6.2e-50 201.1 138 69.6
Thhalv10000779m.g Eutrema salsugineum HOM05D000361 ORTHO05D008294 1.1e-49 200.3 132 71.2
Sp2g09450 Schrenkiella parvula HOM05D000361 ORTHO05D008294 1.1e-49 200.3 132 71.2
AUR62040986 Chenopodium quinoa HOM05D000361 ORTHO05D008294 1.4e-49 199.9 132 71.2
A06p47040 Brassica napus HOM05D000361 ORTHO05D008294 1.8e-49 199.5 132 69.7
BraA06t27577Z Brassica rapa HOM05D000361 ORTHO05D008294 1.8e-49 199.5 132 69.7
CARHR178260 Cardamine hirsuta HOM05D000361 ORTHO05D008294 1.8e-49 199.5 132 70.5
AUR62042103 Chenopodium quinoa HOM05D000361 ORTHO05D008294 2.4e-49 199.1 132 71.2
EL10Ac7g17302 Beta vulgaris HOM05D000361 ORTHO05D008294 3.1e-49 198.7 132 72.0
BcaC06g34528 Brassica carinata HOM05D000361 ORTHO05D008294 3.1e-49 198.7 132 71.2
C07p27530 Brassica napus HOM05D000361 ORTHO05D008294 3.1e-49 198.7 132 71.2
BolC7t43284H Brassica oleracea HOM05D000361 ORTHO05D008294 3.1e-49 198.7 132 71.2
Glyma.15G154900 Glycine max HOM05D000361 ORTHO05D008294 4.0e-49 198.4 138 67.4
Gohir.D02G240100 Gossypium hirsutum HOM05D000361 ORTHO05D008294 4.0e-49 198.4 133 73.7
Gorai.005G268500 Gossypium raimondii HOM05D000361 ORTHO05D008294 4.0e-49 198.4 133 73.7
BcaC06g31601 Brassica carinata HOM05D000361 ORTHO05D008294 5.2e-49 198.0 132 69.7
Gohir.A03G218100 Gossypium hirsutum HOM05D000361 ORTHO05D008294 5.2e-49 198.0 133 72.9
Lj6g0011881 Lotus japonicus HOM05D000361 ORTHO05D008294 6.9e-49 197.6 138 73.9
Prupe.4G121000 Prunus persica HOM05D000361 ORTHO05D008294 2.0e-48 196.1 138 70.3
Thecc.02G000800 Theobroma cacao HOM05D000361 ORTHO05D008294 2.0e-48 196.1 140 70.7
MD10G1224200 Malus domestica HOM05D000361 ORTHO05D008294 3.4e-48 195.3 138 71.0
Glyma.09G047300 Glycine max HOM05D000361 ORTHO05D008294 5.8e-48 194.5 138 64.5
MD05G1242400 Malus domestica HOM05D000361 ORTHO05D008294 5.8e-48 194.5 138 71.0
THA.LOC104811945 Tarenaya hassleriana HOM05D000361 ORTHO05D008294 5.8e-48 194.5 132 68.9
MBI06_g26561_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D008294 2.2e-47 192.6 138 71.7
CDE10G0589 Ceratophyllum demersum HOM05D000361 ORTHO05D008294 8.4e-47 190.7 114 78.9
VMungo1309G2334 Vigna mungo HOM05D000361 ORTHO05D008294 1.1e-46 190.3 132 72.0
ATR0737G139 Amborella trichopoda HOM05D000361 ORTHO05D008294 7.1e-46 187.6 138 62.3
COL.COLO4_25023 Corchorus olitorius HOM05D000361 ORTHO05D008294 7.1e-46 187.6 129 70.5
BcaC03g16683 Brassica carinata HOM05D000361 ORTHO05D008294 9.3e-46 187.2 132 68.9
Phvul.009G245600 Phaseolus vulgaris HOM05D000361 ORTHO05D008294 2.1e-45 186.0 132 69.7
PGR044G0817 Punica granatum HOM05D000361 ORTHO05D008294 2.1e-45 186.0 130 70.8
RcHm_v2.0_Chr5g0022071 Rosa chinensis HOM05D000361 ORTHO05D008294 2.1e-45 186.0 132 74.2
Zm00001eb284360 Zea mays HOM05D000361 ORTHO05D008294 4.6e-45 184.9 137 65.0
Os05g0235800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D008294 7.8e-45 184.1 137 65.0
FvH4_3g13360 Fragaria vesca HOM05D000361 ORTHO05D008294 1.7e-44 183.0 132 72.7
FAN16G0385 Fragaria x ananassa HOM05D000361 ORTHO05D008294 1.7e-44 183.0 132 72.7
Atru.chr10.231 Acer truncatum HOM05D000361 ORTHO05D008294 3.0e-44 182.2 117 74.4
FAN25G0043 Fragaria x ananassa HOM05D000361 ORTHO05D008294 5.1e-44 181.4 132 72.0
FAN25G0195 Fragaria x ananassa HOM05D000361 ORTHO05D008294 5.1e-44 181.4 132 72.0
FAN21G0569 Fragaria x ananassa HOM05D000361 ORTHO05D008294 8.7e-44 180.6 132 72.0
FAN11G3268 Fragaria x ananassa HOM05D000361 ORTHO05D008294 1.1e-43 180.3 132 72.0
BcaB07g30509 Brassica carinata HOM05D000361 ORTHO05D008294 9.6e-43 177.2 132 64.4
Medtr2g437540 Medicago truncatula HOM05D000361 ORTHO05D008294 6.2e-42 174.5 140 65.0
SEGI_18737 Sequoiadendron giganteum HOM05D000361 ORTHO05D008294 5.3e-41 171.4 147 56.5
DCAR_003731 Daucus carota HOM05D000361 ORTHO05D008294 9.9e-40 167.2 92 87.0
SHI08119 Sapria himalayana HOM05D000361 ORTHO05D008294 1.9e-38 162.9 132 62.1
MELO3C006995.2 Cucumis melo HOM05D000361 ORTHO05D008294 2.4e-38 162.5 116 66.4
SMO364G0539 Selaginella moellendorffii HOM05D000361 ORTHO05D008294 9.0e-25 117.5 135 45.9
BolC2t10553H Brassica oleracea HOM05D000361 ORTHO05D008294 1.1e-22 110.5 76 71.1
Mapoly0119s0016 Marchantia polymorpha HOM05D000361 ORTHO05D008294 2.3e-20 102.8 142 40.1
AagrBONN_evm.TU.Sc2ySwM_368.1744 Anthoceros agrestis HOM05D000361 ORTHO05D008294 7.4e-19 97.8 141 39.0
CAN.G418.15 Capsicum annuum HOM05D000062 ORTHO05D020223 4.8e-18 95.1 51 90.2
Pp3c23_390 Physcomitrium patens HOM05D000361 ORTHO05D008294 1.4e-17 93.6 141 40.4
PRCOL_00003449 Prasinoderma coloniale HOM05D000361 ORTHO05D008294 2.9e-15 85.9 144 36.1
C02p45230 Brassica napus HOM05D000361 ORTHO05D020223 6.5e-15 84.7 65 66.2
CBR_g12702 Chara braunii HOM05D000361 ORTHO05D008294 1.1e-14 84.0 136 34.6
Solyc01g020120.3 Solanum lycopersicum HOM05D000361 ORTHO05D020223 3.2e-14 82.4 47 87.2
MCO01G695 Micromonas commoda HOM05D000361 ORTHO05D008294 5.7e-11 71.6 132 33.3
Lsat_1_v5_gn_9_38040 Lactuca sativa HOM05D000361 ORTHO05D020223 1.3e-10 70.5 39 84.6
C02p45220 Brassica napus HOM05D000361 ORTHO05D008294 4.1e-09 65.5 36 83.3


User provided reference genes

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