Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g003000 Solanum pennellii HOM05D008562 ORTHO05D000001 2.9e-137 491.9 249 100.0
Sopen11g011410 Solanum pennellii HOM05D008562 ORTHO05D009932 2.9e-105 385.6 262 79.4
Sopen05g018250 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-24 115.2 120 58.3
Sopen09g027800 Solanum pennellii HOM05D000006 ORTHO05D000001 8.2e-23 111.7 97 64.9
Sopen11g011320 Solanum pennellii HOM05D008562 ORTHO05D000001 9.4e-19 98.2 84 61.9
Sopen11g011290 Solanum pennellii HOM05D008562 ORTHO05D000001 1.6e-18 97.4 84 61.9
AUR62026591 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.7e-18 96.7 96 52.1
AUR62026138 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.0e-17 94.7 101 54.5
AUR62016580 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.3e-17 93.6 101 52.5
Sopen09g022940 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-17 93.6 214 33.2
Sopen04g023400 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-17 92.4 212 32.5
Sopen12g022250 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-16 90.1 103 50.5
CSS0012492 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-16 89.4 101 48.5
Sopen05g021360 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-16 89.4 109 47.7
AUR62022142 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.7e-16 89.0 101 49.5
AUR62032596 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.7e-16 89.0 101 49.5
AUR62033791 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.7e-16 89.0 101 49.5
AUR62036832 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.7e-16 89.0 101 49.5
AUR62036993 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.7e-16 89.0 101 49.5
Ciclev10030259m.g Citrus clementina HOM05D000002 ORTHO05D000001 7.4e-16 88.6 94 54.3
CSS0020078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-15 87.0 81 54.3
CSS0036723 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-15 87.0 81 54.3
Sopen09g024390 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-15 86.7 103 48.5
AUR62034602 Chenopodium quinoa HOM05D000002 ORTHO05D000001 6.3e-15 85.5 128 43.0
HPP92_005122 Vanilla planifolia HOM05D000002 ORTHO05D000001 5.3e-14 82.4 105 48.6
Sopen01g007200 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-14 81.6 97 49.5
CsaV3_3G020670 Cucumis sativus L. HOM05D000002 ORTHO05D000001 1.2e-13 81.3 133 36.8
TWI74G1253 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 5.9e-13 79.0 125 41.6
Sp4g08810 Schrenkiella parvula HOM05D000002 ORTHO05D000001 2.9e-12 76.6 101 44.6
AUR62031847 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.8e-12 76.3 80 48.8
MSTRG.23801 Avicennia marina HOM05D000002 ORTHO05D000001 1.9e-11 73.9 99 44.4
AUR62032586 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.9e-11 73.9 108 41.7
Sopen04g014220 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-11 72.4 96 43.8
Sopen10g018480 Solanum pennellii HOM05D000002 ORTHO05D000001 7.2e-11 72.0 84 44.0
Sopen01g021070 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-10 70.9 94 46.8
Dinv00781 Davidia involucrata HOM05D000002 ORTHO05D000001 2.1e-10 70.5 126 41.3
AUR62039609 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.7e-10 70.1 83 48.2
Manes.04G012950 Manihot esculenta HOM05D000002 ORTHO05D000001 1.8e-09 67.4 91 44.0
ECA232G1928 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-09 67.0 129 41.9
Sopen04g021420 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-09 66.6 65 53.8
SHI21335 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-09 66.2 119 35.3
ECA248G1913 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-09 65.5 109 39.4
ECA233G0875 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-08 64.7 114 43.0
Manes.04G013102 Manihot esculenta HOM05D000002 ORTHO05D000001 1.5e-08 64.3 102 38.2
CSS0028802 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-08 63.9 69 52.2
HanXRQChr03g0067731 Helianthus annuus HOM05D000002 ORTHO05D000001 2.6e-08 63.5 85 44.7
MELO3C029502.2 Cucumis melo HOM05D000002 ORTHO05D000001 3.3e-08 63.2 100 38.0
AUR62027401 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.4e-08 62.8 90 46.7
QL04p083744 Quercus lobata HOM05D000002 ORTHO05D000001 4.4e-08 62.8 207 27.5
QL12p033733 Quercus lobata HOM05D000002 ORTHO05D000001 4.4e-08 62.8 207 27.5
PSO447G0081 Papaver somniferum HOM05D000002 ORTHO05D000001 5.7e-08 62.4 88 44.3
QL03p042293 Quercus lobata HOM05D000002 ORTHO05D000001 5.7e-08 62.4 206 27.7
QL09p045312 Quercus lobata HOM05D000002 ORTHO05D000001 5.7e-08 62.4 206 27.7
THA.LOC104803123 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.7e-08 62.4 102 42.2
PSO339G0080 Papaver somniferum HOM05D000002 ORTHO05D000001 7.5e-08 62.0 109 35.8
PSO455G0014 Papaver somniferum HOM05D000002 ORTHO05D000001 7.5e-08 62.0 80 43.8
PSO675G4440 Papaver somniferum HOM05D000002 ORTHO05D000001 7.5e-08 62.0 108 38.9
SHI02876 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-08 62.0 110 36.4
Ah.10g026310 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.3e-07 61.2 146 37.0
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-07 61.2 119 37.8
FvH4_3g45132 Fragaria vesca HOM05D000002 ORTHO05D000001 1.3e-07 61.2 226 30.5
SHI28571 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-07 61.2 113 35.4
ECA234G2551 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-07 60.5 85 48.2
THA.LOC104824636 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.8e-07 60.1 102 41.2
PSO675G3439 Papaver somniferum HOM05D000002 ORTHO05D000001 3.7e-07 59.7 80 43.8
CSS0002225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-07 59.3 107 35.5
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-07 59.3 113 38.1
Ca_26430_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.8e-07 59.3 166 29.5
ECA246G5056 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-07 59.3 103 39.8
PSO017G6458 Papaver somniferum HOM05D000002 ORTHO05D000001 4.8e-07 59.3 110 38.2
SHI16763 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-07 59.3 113 34.5
QL01p003494 Quercus lobata HOM05D000002 ORTHO05D000001 6.3e-07 58.9 93 36.6
SHI47831 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-07 58.9 122 32.8
SHI48104 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-07 58.9 122 32.8
Ca_05908_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.2e-07 58.5 166 28.3
Ca_06737_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.2e-07 58.5 168 29.2
ECA232G4777 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-07 58.5 108 38.0
Nn2g10460 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.2e-07 58.5 97 38.1
PSO478G0275 Papaver somniferum HOM05D000002 ORTHO05D000001 8.2e-07 58.5 91 38.5
PSO832G4595 Papaver somniferum HOM05D000002 ORTHO05D000001 8.2e-07 58.5 95 38.9
SHI00860 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-07 58.5 114 34.2
SHI06982 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-07 58.5 127 33.9
SHI16747 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-07 58.5 113 34.5
SHI33501 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-07 58.5 113 33.6
Ca_26127_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.1e-06 58.2 166 28.3
Nn5g28050 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-06 58.2 88 38.6
Nn7g37206 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-06 58.2 88 38.6
Ca_24790_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.4e-06 57.8 106 35.8
SHI27482 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 57.8 123 34.1
Sopen10g024510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 57.8 93 38.7
Ca_26800_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-06 57.4 129 32.6
Hma1.2p1_0036F.1_g023620 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-06 57.4 99 36.4
Hma1.2p1_0079F.1_g041033 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-06 57.4 99 36.4
Hma1.2p1_0461F.1_g157793 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-06 57.4 99 36.4
Hma1.2p1_1974F.1_g309665 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-06 57.4 99 36.4
Hma1.2p1_2302F.1_g319293 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-06 57.4 99 36.4
Hma1.2p1_2987F.1_g331293 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-06 57.4 99 36.4
PSO013G0135 Papaver somniferum HOM05D000002 ORTHO05D000001 1.8e-06 57.4 110 36.4
PSO210G4968 Papaver somniferum HOM05D000002 ORTHO05D000001 1.8e-06 57.4 109 36.7
SHI04496 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 57.4 108 34.3
SHI21288 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 57.4 107 35.5
SHI03431 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 57.0 88 37.5
SHI09285 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 57.0 88 37.5
SHI10423 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 57.0 107 34.6
SHI21640 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 57.0 123 34.1
SHI23402 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 57.0 112 35.7
Sopen12g027470 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 57.0 55 49.1
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-06 56.6 88 37.5
AUR62007698 Chenopodium quinoa HOM05D000087 ORTHO05D002585 3.1e-06 56.6 88 38.6
Ca_18240_v3 Cicer arietinum L. HOM05D000747 ORTHO05D001683 3.1e-06 56.6 106 34.9
Ca_19547_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.1e-06 56.6 106 34.9
Ca_28147_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.1e-06 56.6 106 35.8
ECA236G4891 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-06 56.6 121 34.7
PSO478G2780 Papaver somniferum HOM05D000002 ORTHO05D000001 3.1e-06 56.6 80 40.0
Ca_13725_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.1e-06 56.2 108 36.1
Ca_18229_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.1e-06 56.2 106 34.9
ECA238G1827 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-06 56.2 76 43.4
ECA240G2823 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-06 56.2 106 38.7
SHI12752 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-06 56.2 107 35.5
SHI26279 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-06 56.2 107 36.4
SHI26423 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-06 56.2 104 33.7
Sopen09g023360 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-06 56.2 99 40.4
EL10Ac9g22396 Beta vulgaris HOM05D000002 ORTHO05D000001 5.3e-06 55.8 97 37.1
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.3e-06 55.8 96 37.5
Ca_13896_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.3e-06 55.8 106 34.9
ECA238G4725 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-06 55.8 106 34.0
ECA238G4755 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-06 55.8 113 33.6
SHI07801 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-06 55.8 107 35.5
SHI19840 Sapria himalayana HOM05D001958 ORTHO05D000001 5.3e-06 55.8 109 34.9
SHI25733 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-06 55.8 107 35.5
THA.LOC104820470 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.3e-06 55.8 104 34.6
CSS0047943 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-06 55.5 83 39.8
Ca_05343_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.0e-06 55.5 166 28.3
Ca_06584_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.0e-06 55.5 105 36.2
SHI07921 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-06 55.5 113 33.6
SHI15352 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-06 55.5 114 34.2
SHI18782 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-06 55.5 108 33.3
CSS0015876 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-06 55.1 85 37.6
CSS0027562 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-06 55.1 82 40.2
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-06 55.1 96 37.5
CSS0046608 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 9.1e-06 55.1 95 34.7
Ca_17143_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.1e-06 55.1 106 34.9
ECA232G2478 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.1e-06 55.1 80 40.0
ECA233G2364 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.1e-06 55.1 80 40.0
ECA248G3034 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.1e-06 55.1 96 36.5
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.1e-06 55.1 83 38.6
SHI14684 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-06 55.1 80 37.5
SHI16905 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-06 55.1 107 35.5
SHI27716 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-06 55.1 106 34.9
SHI32965 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-06 55.1 107 33.6
PGSC0003DMG400046219 Solanum tuberosum HOM05D000002 ORTHO05D000001 9.1e-06 55.1 107 35.5


User provided reference genes

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