Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g002560 Solanum pennellii HOM05D008923 ORTHO05D011423 7.2e-74 280.4 135 100.0
Peaxi162Scf00651g00634 Petunia axillaris HOM05D008466 ORTHO05D010817 9.2e-69 263.5 128 98.4
Nitab4.5_0014136g0010 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.5e-66 256.1 127 96.1
FAN20G1591 Fragaria x ananassa HOM05D008923 ORTHO05D011423 1.5e-63 246.1 129 92.2
HanXRQMTg0579461 Helianthus annuus HOM05D008923 ORTHO05D011423 1.1e-61 240.0 126 92.1
VMungo0565G0002 Vigna mungo HOM05D008923 ORTHO05D011423 5.4e-61 237.7 145 84.1
Nitab4.5_0000031g0180 Nicotiana tabacum HOM05D008466 ORTHO05D011423 7.3e-58 227.3 119 91.6
RhsimMtG0002900 Rhododendron simsii HOM05D008923 ORTHO05D011423 6.2e-49 197.6 108 91.7
Nitab4.5_0001952g0260 Nicotiana tabacum HOM05D008466 ORTHO05D010817 8.3e-46 187.2 95 93.7
Psat0s2778g0120 Pisum sativum HOM05D008923 ORTHO05D011423 4.1e-45 184.9 119 82.4
Nitab4.5_0008578g0050 Nicotiana tabacum HOM05D008466 ORTHO05D011423 6.6e-43 177.6 99 86.9
FvH4_c1g00520 Fragaria vesca HOM05D008923 ORTHO05D011423 1.2e-39 166.8 88 95.5
Ca_04597_v3 Cicer arietinum L. HOM05D008923 ORTHO05D013768 9.9e-39 163.7 112 78.6
SalBow1G1510 Salvia bowleyana HOM05D008923 ORTHO05D011423 2.3e-35 152.5 101 80.2
SGA_v2.0_scaffold477G52174 Striga asiatica HOM05D008923 ORTHO05D016904 5.1e-35 151.4 80 88.8
ATR0480G001 Amborella trichopoda HOM05D008923 ORTHO05D011423 1.5e-31 139.8 87 83.9
Gohir.D08G087750 Gossypium hirsutum HOM05D008923 ORTHO05D011423 3.2e-29 132.1 73 90.4
Gohir.D02G091950 Gossypium hirsutum HOM05D008923 ORTHO05D011423 1.7e-27 126.3 95 72.6
Nitab4.5_0001796g0310 Nicotiana tabacum HOM05D008923 ORTHO05D011423 2.3e-27 125.9 68 94.1
Nitab4.5_0000172g1700 Nicotiana tabacum HOM05D008466 ORTHO05D010817 3.9e-27 125.2 100 68.0
Nitab4.5_0010033g0120 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.5e-26 123.2 60 93.3
MBI08_g16748_MAGBIO Magnolia biondii HOM05D008923 ORTHO05D011423 4.3e-26 121.7 77 83.1
Gorai.005G103300 Gossypium raimondii HOM05D008923 ORTHO05D011423 5.6e-26 121.3 69 89.9
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 9.0e-24 114.0 64 84.4
Nitab4.5_0000925g0080 Nicotiana tabacum HOM05D008923 ORTHO05D011423 2.9e-22 109.0 53 100.0
Nitab4.5_0000172g2090 Nicotiana tabacum HOM05D008466 ORTHO05D011423 4.9e-22 108.2 57 87.7
Hund22926 Selenicereus undatus HOM05D002729 ORTHO05D003163 8.4e-22 107.5 66 81.8
Actinidia34868 Actinidia chinensis HOM05D041439 ORTHO05D011423 1.4e-21 106.7 52 92.3
SHI26553 Sapria himalayana HOM05D008923 ORTHO05D011423 3.2e-21 105.5 66 83.3
arahy.Tifrunner.gnm1.ann1.S21A07 Arachis hypogaea HOM05D008923 ORTHO05D011423 2.7e-20 102.4 58 84.5
Hma1.2p1_0335F.1_g128880 Hydrangea macrophylla HOM05D008923 ORTHO05D011423 2.7e-20 102.4 51 100.0
GSVIVG01004963001 Vitis vinifera HOM05D008923 ORTHO05D011423 1.8e-19 99.8 52 96.2
ATMG00285 Arabidopsis thaliana HOM05D008466 ORTHO05D010817 6.7e-19 97.8 51 96.1
CAN.G993.35 Capsicum annuum HOM05D000924 ORTHO05D001209 4.3e-18 95.1 51 88.2
SHI54298 Sapria himalayana HOM05D008923 ORTHO05D011423 8.1e-17 90.9 51 90.2
SEGI_14764 Sequoiadendron giganteum HOM05D008466 ORTHO05D010817 6.9e-16 87.8 51 86.3
Nitab4.5_0002325g0090 Nicotiana tabacum HOM05D008466 ORTHO05D010817 4.5e-15 85.1 68 69.1
Nitab4.5_0000925g0100 Nicotiana tabacum HOM05D008466 ORTHO05D011423 5.8e-15 84.7 44 86.4
Gorai.001G167700 Gossypium raimondii HOM05D008466 ORTHO05D010817 6.0e-12 74.7 38 97.4
Nitab4.5_0001796g0330 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.8e-11 73.2 49 67.3
Lsat_1_v5_gn_2_129581 Lactuca sativa HOM05D000580 ORTHO05D011423 1.1e-08 63.9 38 78.9
COL.COLO4_03971 Corchorus olitorius HOM05D041439 ORTHO05D044714 1.5e-07 60.1 29 82.8
COL.COLO4_04100 Corchorus olitorius HOM05D041439 ORTHO05D044714 1.5e-07 60.1 29 82.8
Ca_26887_v3 Cicer arietinum L. HOM05D031740 ORTHO05D011423 2.6e-07 59.3 57 56.1


User provided reference genes

Program Settings