Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen00g002210 Solanum pennellii HOM05D000920 ORTHO05D004854 1.6e-223 779.2 424 100.0
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 2.6e-37 160.6 161 58.4
Sopen00g006980 Solanum pennellii HOM05D001275 ORTHO05D001570 1.0e-36 158.7 181 54.7
BcaNung05884 Brassica carinata HOM05D000920 ORTHO05D004854 1.1e-35 155.2 137 60.6
Oeu020383.1 Olea europaea HOM05D000920 ORTHO05D004854 6.1e-34 149.4 395 29.9
Sopen00g005200 Solanum pennellii HOM05D001275 ORTHO05D012896 3.7e-31 140.2 81 86.4
PGSC0003DMG400024428 Solanum tuberosum HOM05D000920 ORTHO05D004854 1.1e-30 138.7 68 89.7
ScUNg0001120 Simmondsia chinensis HOM05D000920 ORTHO05D004854 6.9e-30 136.0 70 84.3
A06p25510 Brassica napus HOM05D000920 ORTHO05D004854 9.0e-30 135.6 86 73.3
BNapus_Darmor_BZH_scaffold_107p00560 Brassica napus HOM05D000920 ORTHO05D004854 2.0e-29 134.4 76 78.9
ScUNg0000740 Simmondsia chinensis HOM05D000920 ORTHO05D004854 2.0e-29 134.4 68 85.3
A06p24390 Brassica napus HOM05D000920 ORTHO05D004854 2.6e-29 134.0 70 84.3
BcaB04g16911 Brassica carinata HOM05D000920 ORTHO05D004854 7.7e-29 132.5 70 82.9
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 1.0e-28 132.1 79 77.2
A06p24060 Brassica napus HOM05D000920 ORTHO05D004854 1.7e-28 131.3 69 84.1
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 1.7e-28 131.3 69 82.6
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 2.2e-28 131.0 68 83.8
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 1.9e-27 127.9 74 77.0
A05p22260 Brassica napus HOM05D000920 ORTHO05D004854 2.5e-27 127.5 74 75.7
LjContig00092g0015566 Lotus japonicus HOM05D001828 ORTHO05D001745 4.2e-27 126.7 68 82.4
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 4.2e-27 126.7 156 50.6
Sopen06g010050 Solanum pennellii HOM05D001029 ORTHO05D000917 7.2e-27 125.9 60 98.3
A05p22620 Brassica napus HOM05D000920 ORTHO05D004854 1.0e-25 122.1 68 77.9
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 3.9e-25 120.2 79 70.9
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 5.1e-25 119.8 65 80.0
BNapus_Darmor_BZH_scaffold_120p00040 Brassica napus HOM05D000920 ORTHO05D004854 4.3e-24 116.7 64 81.2
A05p22590 Brassica napus HOM05D000920 ORTHO05D004854 5.7e-24 116.3 75 70.7
A09p31330 Brassica napus HOM05D000920 ORTHO05D004854 7.4e-24 115.9 67 76.1
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 2.2e-23 114.4 69 72.5
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 4.8e-23 113.2 69 73.9
unitig_548.g34904 Utricularia gibba HOM05D000920 ORTHO05D004854 1.4e-22 111.7 60 81.7
unitig_550.g34863 Utricularia gibba HOM05D000920 ORTHO05D004854 1.4e-22 111.7 60 81.7
unitig_676.g29553 Utricularia gibba HOM05D000920 ORTHO05D004854 1.4e-22 111.7 60 81.7
unitig_99.g29794 Utricularia gibba HOM05D000920 ORTHO05D004854 1.4e-22 111.7 60 81.7
Sopen00g001420 Solanum pennellii HOM05D001275 ORTHO05D001570 1.8e-22 111.3 90 65.6
Sopen00g002320 Solanum pennellii HOM05D008855 ORTHO05D030629 2.4e-22 110.9 79 73.4
BNapus_Darmor_BZH_scaffold_85p00030 Brassica napus HOM05D000920 ORTHO05D004854 1.5e-21 108.2 61 75.4
Sc14g0004110 Simmondsia chinensis HOM05D000920 ORTHO05D004854 2.0e-21 107.8 55 83.6
ScUNg0001170 Simmondsia chinensis HOM05D000920 ORTHO05D004854 2.0e-21 107.8 55 83.6
Sopen00g006720 Solanum pennellii HOM05D001275 ORTHO05D012896 4.5e-21 106.7 50 100.0
A09p22260 Brassica napus HOM05D000920 ORTHO05D004854 7.7e-21 105.9 70 71.4
BcaNung06295 Brassica carinata HOM05D000920 ORTHO05D004854 5.0e-20 103.2 54 83.3
A05p22400 Brassica napus HOM05D000920 ORTHO05D004854 5.0e-20 103.2 61 72.1
Sopen07g009460 Solanum pennellii HOM05D003608 ORTHO05D010452 1.1e-19 102.1 58 87.9
HPP92_007078 Vanilla planifolia HOM05D000920 ORTHO05D004854 3.2e-19 100.5 51 82.4
Mapoly4316s0001 Marchantia polymorpha HOM05D000920 ORTHO05D004854 9.4e-19 99.0 52 82.7
A05p22570 Brassica napus HOM05D000920 ORTHO05D003704 2.1e-18 97.8 55 76.4
A06p25590 Brassica napus HOM05D000920 ORTHO05D000922 4.7e-18 96.7 91 54.9
Sopen00g006730 Solanum pennellii HOM05D003608 ORTHO05D012896 7.9e-18 95.9 121 52.1
A06p26060 Brassica napus HOM05D000920 ORTHO05D004854 1.0e-17 95.5 59 76.3
A06p23770 Brassica napus HOM05D000920 ORTHO05D004854 2.3e-17 94.4 48 85.4
unitig_8.g4074 Utricularia gibba HOM05D000920 ORTHO05D004854 1.5e-16 91.7 55 72.7
A06p23530 Brassica napus HOM05D000920 ORTHO05D004854 2.0e-16 91.3 56 67.9
BNapus_Darmor_BZH_scaffold_107p00550 Brassica napus HOM05D000920 ORTHO05D004854 4.4e-16 90.1 50 76.0
A06p24080 Brassica napus HOM05D000920 ORTHO05D000922 7.4e-16 89.4 48 77.1
A09p31310 Brassica napus HOM05D000920 ORTHO05D004854 7.4e-16 89.4 76 57.9
Sopen00g012640 Solanum pennellii HOM05D001275 ORTHO05D030629 1.3e-15 88.6 60 73.3
Oeu061862.1 Olea europaea HOM05D000920 ORTHO05D004854 1.7e-15 88.2 45 82.2
A05p22380 Brassica napus HOM05D000920 ORTHO05D010211 6.3e-15 86.3 77 57.1
Oeu008745.1 Olea europaea HOM05D001319 ORTHO05D000922 1.4e-14 85.1 51 72.5
BNapus_Darmor_BZH_scaffold_107p00380 Brassica napus HOM05D000920 ORTHO05D004854 7.0e-14 82.8 92 54.3
Sopen00g001790 Solanum pennellii HOM05D001275 ORTHO05D001570 2.0e-13 81.3 53 71.7
A05p22310 Brassica napus HOM05D000920 ORTHO05D014976 4.5e-13 80.1 42 78.6
A05p22060 Brassica napus HOM05D000920 ORTHO05D004854 5.9e-13 79.7 47 76.6
A06p24740 Brassica napus HOM05D008229 ORTHO05D032583 1.3e-12 78.6 39 82.1
BcaB04g16896 Brassica carinata HOM05D000920 ORTHO05D004854 3.8e-12 77.0 60 65.0
BNapus_Darmor_BZH_scaffold_164p00020 Brassica napus HOM05D000920 ORTHO05D003704 6.5e-12 76.3 41 73.2
Sopen00g014390 Solanum pennellii HOM05D008855 ORTHO05D012896 6.5e-12 76.3 115 53.9
Rhsim05G0123800 Rhododendron simsii HOM05D000920 ORTHO05D004854 1.5e-11 75.1 46 76.1
Sopen00g001770 Solanum pennellii HOM05D000920 ORTHO05D004854 1.5e-11 75.1 43 86.0
BNapus_Darmor_BZH_scaffold_107p00210 Brassica napus HOM05D000920 ORTHO05D004854 1.9e-11 74.7 70 55.7
Sopen00g001700 Solanum pennellii HOM05D001275 ORTHO05D012896 1.9e-11 74.7 39 87.2
BcaC06g36787 Brassica carinata HOM05D000920 ORTHO05D003704 2.5e-11 74.3 48 68.8
CDE02G3011 Ceratophyllum demersum HOM05D001018 ORTHO05D004854 2.5e-11 74.3 40 82.5
Manes.S026416 Manihot esculenta HOM05D000920 ORTHO05D004854 2.5e-11 74.3 38 86.8
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Thhalv10028144m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Thhalv10028160m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Thhalv10028221m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Thhalv10028284m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.18G141021 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.18G143501 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S001308 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S003270 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S005559 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S009810 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S011445 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S014715 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S015369 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S017659 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S019948 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S022652 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S022952 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S023252 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S024152 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S024916 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S025152 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S025316 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S025616 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S026116 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S026152 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S026552 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S026852 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S026916 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S027252 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S027816 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S028416 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S029316 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S029452 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S029652 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S029716 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S029916 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S030316 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S030552 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S031416 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S032816 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S034716 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S035316 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S035616 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S035916 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S037416 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S037716 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S038216 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S039016 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S040516 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S041716 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S043416 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S044016 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S045316 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S046516 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S047916 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S049416 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S050716 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S051216 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S051716 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S053416 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S053916 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S055316 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S055716 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S056416 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Manes.S056816 Manihot esculenta HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Potri.008G224120 Populus trichocarpa HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Potri.008G224147 Populus trichocarpa HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Potri.008G224174 Populus trichocarpa HOM05D000920 ORTHO05D004854 3.2e-11 73.9 38 86.8
Sopen00g010360 Solanum pennellii HOM05D001275 ORTHO05D012896 5.5e-11 73.2 40 87.5
A06p25860 Brassica napus HOM05D000920 ORTHO05D003704 7.2e-11 72.8 43 72.1
A06p26480 Brassica napus HOM05D000920 ORTHO05D000922 9.4e-11 72.4 42 73.8
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 9.4e-11 72.4 43 81.4
Lj6g0027271 Lotus japonicus HOM05D000920 ORTHO05D004854 2.1e-10 71.2 43 81.4
LjContig00006g0000950 Lotus japonicus HOM05D000920 ORTHO05D004854 2.1e-10 71.2 43 81.4
LjContig00006g0017690 Lotus japonicus HOM05D000920 ORTHO05D004854 2.1e-10 71.2 43 81.4
LjContig00479g0009062 Lotus japonicus HOM05D000920 ORTHO05D004854 2.1e-10 71.2 43 81.4
SHI35536 Sapria himalayana HOM05D015261 ORTHO05D000626 2.1e-10 71.2 38 73.7
Solyc00g500234.1 Solanum lycopersicum HOM05D008855 ORTHO05D012896 2.1e-10 71.2 40 85.0
unitig_579.g34797 Utricularia gibba HOM05D000920 ORTHO05D003704 2.1e-10 71.2 41 70.7
BcaC07g37369 Brassica carinata HOM05D000920 ORTHO05D003704 2.7e-10 70.9 71 53.5
unitig_146.g30252 Utricularia gibba HOM05D000920 ORTHO05D004854 2.7e-10 70.9 40 80.0
unitig_659.g33188 Utricularia gibba HOM05D008864 ORTHO05D004854 2.7e-10 70.9 40 80.0
Sopen00g011490 Solanum pennellii HOM05D001275 ORTHO05D012896 3.6e-10 70.5 45 77.8
PGSC0003DMG400001030 Solanum tuberosum HOM05D000920 ORTHO05D004854 3.6e-10 70.5 56 62.5
Sopen00g014150 Solanum pennellii HOM05D008855 ORTHO05D012896 6.1e-10 69.7 35 91.4
SHI35535 Sapria himalayana HOM05D015261 ORTHO05D001679 1.0e-09 68.9 38 71.1
SHI35538 Sapria himalayana HOM05D015261 ORTHO05D001679 1.0e-09 68.9 38 71.1
SHI39806 Sapria himalayana HOM05D015261 ORTHO05D001679 1.0e-09 68.9 38 71.1
SHI39841 Sapria himalayana HOM05D015261 ORTHO05D001679 1.0e-09 68.9 38 71.1
SHI41312 Sapria himalayana HOM05D015261 ORTHO05D004854 1.0e-09 68.9 38 71.1
SHI41730 Sapria himalayana HOM05D015261 ORTHO05D004854 1.0e-09 68.9 38 71.1
SHI42217 Sapria himalayana HOM05D015261 ORTHO05D004854 1.0e-09 68.9 38 71.1
BNapus_Darmor_BZH_scaffold_107p00280 Brassica napus HOM05D000920 ORTHO05D004854 1.4e-09 68.6 39 79.5
Solyc00g500259.1 Solanum lycopersicum HOM05D008855 ORTHO05D011808 2.3e-09 67.8 38 84.2
Solyc00g500409.1 Solanum lycopersicum HOM05D008855 ORTHO05D012896 2.3e-09 67.8 43 76.7
Sopen00g001740 Solanum pennellii HOM05D008855 ORTHO05D012896 3.9e-09 67.0 38 81.6
Sopen00g003790 Solanum pennellii HOM05D001275 ORTHO05D001570 5.2e-09 66.6 51 68.6
Sopen00g004810 Solanum pennellii HOM05D000691 ORTHO05D000378 5.2e-09 66.6 72 54.2
Sopen00g002240 Solanum pennellii HOM05D000691 ORTHO05D000378 8.8e-09 65.9 62 59.7
Sopen00g006030 Solanum pennellii HOM05D008855 ORTHO05D012896 2.6e-08 64.3 112 42.0
Sopen06g010060 Solanum pennellii HOM05D008855 ORTHO05D012896 2.6e-08 64.3 36 86.1
PGSC0003DMG400041789 Solanum tuberosum HOM05D003608 ORTHO05D001745 2.6e-08 64.3 42 73.8
C02p52900 Brassica napus HOM05D000920 ORTHO05D004854 3.3e-08 63.9 39 69.2
Solyc11g051176.1 Solanum lycopersicum HOM05D001275 ORTHO05D001570 4.4e-08 63.5 57 59.6
Sopen00g001870 Solanum pennellii HOM05D003608 ORTHO05D000917 2.2e-07 61.2 35 82.9
Sopen07g009530 Solanum pennellii HOM05D003608 ORTHO05D000917 6.3e-07 59.7 31 93.5
Sopen00g013680 Solanum pennellii HOM05D008855 ORTHO05D012896 1.1e-06 58.9 39 74.4
A05p22440 Brassica napus HOM05D000920 ORTHO05D004854 1.4e-06 58.5 44 68.2
EL10As19g24179 Beta vulgaris HOM05D001319 ORTHO05D000922 3.1e-06 57.4 42 59.5
Sopen07g009420 Solanum pennellii HOM05D001275 ORTHO05D001570 5.3e-06 56.6 35 77.1
A06p24970 Brassica napus HOM05D000920 ORTHO05D004854 9.1e-06 55.8 70 45.7


User provided reference genes

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