Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g099690.1 Solanum lycopersicum HOM05D000310 ORTHO05D002456 3.2e-39 164.9 99 100.0
Solyc12g099730.3 Solanum lycopersicum HOM05D000310 ORTHO05D002456 5.4e-18 94.4 95 51.6
Peaxi162Scf00272g00923 Petunia axillaris HOM05D000310 ORTHO05D002456 5.6e-15 84.3 106 44.3
Nitab4.5_0001290g0020 Nicotiana tabacum HOM05D000310 ORTHO05D002456 7.3e-15 84.0 113 44.2
Solyc12g099680.1 Solanum lycopersicum HOM05D000310 ORTHO05D002456 2.8e-14 82.0 101 45.5
Nitab4.5_0002310g0010 Nicotiana tabacum HOM05D000310 ORTHO05D002456 6.2e-14 80.9 121 41.3
Nitab4.5_0002451g0060 Nicotiana tabacum HOM05D000310 ORTHO05D002456 9.9e-12 73.6 106 44.3
CAN.G71.23 Capsicum annuum HOM05D000310 ORTHO05D002456 1.7e-11 72.8 100 44.0
Dinv22164 Davidia involucrata HOM05D000310 ORTHO05D002456 2.2e-11 72.4 100 43.0
Solyc11g065470.2 Solanum lycopersicum HOM05D000310 ORTHO05D002456 2.2e-11 72.4 109 41.3
Sopen11g025220 Solanum pennellii HOM05D000310 ORTHO05D002456 2.2e-11 72.4 109 41.3
Peaxi162Scf00004g02918 Petunia axillaris HOM05D000310 ORTHO05D002456 8.3e-11 70.5 44 63.6
Nitab4.5_0006012g0040 Nicotiana tabacum HOM05D000310 ORTHO05D002456 1.1e-10 70.1 104 43.3
Peaxi162Scf00004g03012 Petunia axillaris HOM05D000310 ORTHO05D002456 1.4e-10 69.7 41 68.3
Solyc11g065480.3 Solanum lycopersicum HOM05D000310 ORTHO05D002456 1.4e-10 69.7 44 65.9
Nitab4.5_0006617g0010 Nicotiana tabacum HOM05D000310 ORTHO05D002456 1.9e-10 69.3 103 42.7
Nitab4.5_0002451g0030 Nicotiana tabacum HOM05D000310 ORTHO05D002456 2.4e-10 68.9 103 41.7
Solyc11g065390.3 Solanum lycopersicum HOM05D000310 ORTHO05D002456 4.1e-10 68.2 99 44.4
Sopen11g025170 Solanum pennellii HOM05D000310 ORTHO05D002456 9.2e-10 67.0 102 43.1
Peaxi162Scf00004g00319 Petunia axillaris HOM05D000310 ORTHO05D002456 1.2e-09 66.6 104 41.3
Solyc11g065440.3 Solanum lycopersicum HOM05D000310 ORTHO05D002456 2.7e-09 65.5 108 38.9
Lj3A484G18 Lonicera japonica HOM05D000310 ORTHO05D002456 3.5e-09 65.1 105 39.0
Nitab4.5_0002451g0080 Nicotiana tabacum HOM05D000310 ORTHO05D002456 4.6e-09 64.7 112 35.7
unitig_60.g25641 Utricularia gibba HOM05D000310 ORTHO05D002456 6.0e-09 64.3 44 59.1
Lj4A821G41 Lonicera japonica HOM05D000310 ORTHO05D002456 7.8e-09 63.9 105 38.1
Nitab4.5_0006012g0010 Nicotiana tabacum HOM05D000310 ORTHO05D002456 7.8e-09 63.9 44 61.4
Nitab4.5_0006012g0050 Nicotiana tabacum HOM05D000310 ORTHO05D002456 1.3e-08 63.2 112 36.6
CAN.G747.3 Capsicum annuum HOM05D000310 ORTHO05D002456 2.3e-08 62.4 111 35.1
Oeu025882.1 Olea europaea HOM05D000310 ORTHO05D002456 2.3e-08 62.4 44 59.1
Solyc11g065400.2 Solanum lycopersicum HOM05D000310 ORTHO05D002456 2.3e-08 62.4 45 62.2
Sopen11g025180 Solanum pennellii HOM05D000310 ORTHO05D000001 2.3e-08 62.4 45 62.2
BraA10t44598Z Brassica rapa HOM05D000310 ORTHO05D002456 3.0e-08 62.0 44 56.8
C09p64360 Brassica napus HOM05D000310 ORTHO05D002456 3.9e-08 61.6 44 56.8
DCAR_009177 Daucus carota HOM05D000310 ORTHO05D002456 3.9e-08 61.6 45 57.8
Lsat_1_v5_gn_6_71121 Lactuca sativa HOM05D000310 ORTHO05D002456 3.9e-08 61.6 44 56.8
Peaxi162Scf00004g02917 Petunia axillaris HOM05D000310 ORTHO05D002456 3.9e-08 61.6 107 35.5
BcaB08g37007 Brassica carinata HOM05D000310 ORTHO05D002456 5.1e-08 61.2 44 54.5
ECA233G3809 Erigeron canadensis HOM05D000310 ORTHO05D002456 5.1e-08 61.2 37 67.6
Oeu032825.1 Olea europaea HOM05D000310 ORTHO05D002456 5.1e-08 61.2 99 38.4
Rhsim13G0219100 Rhododendron simsii HOM05D000310 ORTHO05D002456 5.1e-08 61.2 44 61.4
Rhsim13G0218300 Rhododendron simsii HOM05D000310 ORTHO05D002456 6.6e-08 60.8 45 60.0
MSTRG.18440 Avicennia marina HOM05D000310 ORTHO05D002456 1.5e-07 59.7 44 54.5
CAN.G362.20 Capsicum annuum HOM05D000310 ORTHO05D002456 1.5e-07 59.7 45 57.8
Lsat_1_v5_gn_6_71141 Lactuca sativa HOM05D000310 ORTHO05D002456 1.5e-07 59.7 44 54.5
Nitab4.5_0008371g0010 Nicotiana tabacum HOM05D000310 ORTHO05D002456 1.5e-07 59.7 107 36.4
Rhsim13G0219400 Rhododendron simsii HOM05D000310 ORTHO05D002456 1.5e-07 59.7 39 64.1
Thhalv10015814m.g Eutrema salsugineum HOM05D000310 ORTHO05D002456 1.9e-07 59.3 44 54.5
RcHm_v2.0_Chr5g0052791 Rosa chinensis HOM05D000310 ORTHO05D002456 1.9e-07 59.3 44 54.5
BcaC04g19181 Brassica carinata HOM05D000310 ORTHO05D002456 2.5e-07 58.9 44 54.5
BolC9t59274H Brassica oleracea HOM05D000310 ORTHO05D002456 2.5e-07 58.9 44 54.5
PGSC0003DMG400029991 Solanum tuberosum HOM05D000310 ORTHO05D002456 2.5e-07 58.9 45 62.2
unitig_744.g24577 Utricularia gibba HOM05D000310 ORTHO05D002456 2.5e-07 58.9 44 50.0
Haze_23156 Corylus avellana HOM05D000310 ORTHO05D002456 3.3e-07 58.5 89 36.0
ECA233G1242 Erigeron canadensis HOM05D000310 ORTHO05D002456 3.3e-07 58.5 82 39.0
unitig_0.g295 Utricularia gibba HOM05D000310 ORTHO05D002456 3.3e-07 58.5 44 54.5
BcaC04g19182 Brassica carinata HOM05D000310 ORTHO05D002456 4.3e-07 58.2 44 52.3
C09p64420 Brassica napus HOM05D000310 ORTHO05D002456 4.3e-07 58.2 44 52.3
BolC9t59278H Brassica oleracea HOM05D000310 ORTHO05D002456 4.3e-07 58.2 44 52.3
BraA10t44602Z Brassica rapa HOM05D000310 ORTHO05D002456 4.3e-07 58.2 44 52.3
Cc01_g04840 Coffea canephora HOM05D000310 ORTHO05D002456 4.3e-07 58.2 107 30.8
Migut.D00619 Erythranthe guttata HOM05D000310 ORTHO05D002456 4.3e-07 58.2 44 56.8
Oeu004147.1 Olea europaea HOM05D000310 ORTHO05D002456 4.3e-07 58.2 44 56.8
Sp6g31150 Schrenkiella parvula HOM05D000310 ORTHO05D002456 4.3e-07 58.2 44 56.8
Aa31LG3G14790 Aethionema arabicum HOM05D000310 ORTHO05D002456 5.6e-07 57.8 39 59.0
vmacro04137 Vaccinium macrocarpon HOM05D000310 ORTHO05D022861 5.6e-07 57.8 44 56.8
BcaB08g37005 Brassica carinata HOM05D000310 ORTHO05D002456 7.3e-07 57.4 43 53.5
CsaV3_1G042900 Cucumis sativus L. HOM05D000310 ORTHO05D002456 7.3e-07 57.4 111 30.6
Thhalv10015782m.g Eutrema salsugineum HOM05D000310 ORTHO05D002456 7.3e-07 57.4 44 50.0
FAN28G2411 Fragaria x ananassa HOM05D000310 ORTHO05D002456 7.3e-07 57.4 44 52.3
FAN28G2674 Fragaria x ananassa HOM05D000310 ORTHO05D002456 7.3e-07 57.4 44 52.3
Sp6g31160 Schrenkiella parvula HOM05D000310 ORTHO05D002456 7.3e-07 57.4 44 56.8
CSS0004777 Camellia sinensis var. sinensis HOM05D000310 ORTHO05D002456 9.5e-07 57.0 106 35.8
Migut.D00617 Erythranthe guttata HOM05D000310 ORTHO05D002456 9.5e-07 57.0 44 52.3
Potri.001G256200 Populus trichocarpa HOM05D000310 ORTHO05D002456 9.5e-07 57.0 44 52.3
QL01p004218 Quercus lobata HOM05D000310 ORTHO05D002456 9.5e-07 57.0 42 54.8
SGA_v2.0_scaffold8G04576 Striga asiatica HOM05D000310 ORTHO05D002456 1.2e-06 56.6 44 54.5
THA.LOC104811176 Tarenaya hassleriana HOM05D000310 ORTHO05D002456 1.2e-06 56.6 44 54.5
BcaB01g05401 Brassica carinata HOM05D000310 ORTHO05D002456 1.6e-06 56.2 44 52.3
CSS0020143 Camellia sinensis var. sinensis HOM05D000310 ORTHO05D002456 1.6e-06 56.2 45 53.3
CSS0048646 Camellia sinensis var. sinensis HOM05D000310 ORTHO05D002456 1.6e-06 56.2 114 34.2
Cfa009287 Carpinus fangiana HOM05D000310 ORTHO05D002456 1.6e-06 56.2 105 31.4
Lsat_1_v5_gn_6_71081 Lactuca sativa HOM05D000310 ORTHO05D002456 1.6e-06 56.2 99 34.3
Oeu025883.1 Olea europaea HOM05D000310 ORTHO05D002456 1.6e-06 56.2 88 39.8
CSS0011213 Camellia sinensis var. sinensis HOM05D000310 ORTHO05D002456 2.1e-06 55.8 97 35.1
CSS0033206 Camellia sinensis var. sinensis HOM05D000310 ORTHO05D002456 2.1e-06 55.8 109 34.9
Haze_13681 Corylus avellana HOM05D000310 ORTHO05D002456 2.1e-06 55.8 103 32.0
FvH4_1g09900 Fragaria vesca HOM05D000310 ORTHO05D002456 2.1e-06 55.8 44 50.0
FAN19G0207 Fragaria x ananassa HOM05D000310 ORTHO05D002456 2.1e-06 55.8 44 50.0
SalBow1G8249 Salvia bowleyana HOM05D000310 ORTHO05D002456 2.1e-06 55.8 44 52.3
Actinidia06919 Actinidia chinensis HOM05D000310 ORTHO05D002456 3.6e-06 55.1 42 50.0
CAN.G388.42 Capsicum annuum HOM05D000310 ORTHO05D002456 3.6e-06 55.1 96 35.4
Cfa012611 Carpinus fangiana HOM05D000310 ORTHO05D000104 3.6e-06 55.1 44 50.0
Cfa012612 Carpinus fangiana HOM05D000310 ORTHO05D002456 3.6e-06 55.1 44 50.0
ClCG03G013140 Citrullus lanatus HOM05D000310 ORTHO05D002456 3.6e-06 55.1 110 31.8
QL01p004229 Quercus lobata HOM05D000310 ORTHO05D002456 3.6e-06 55.1 42 52.4
Sabra16G0156200 Salix brachista HOM05D000310 ORTHO05D002456 3.6e-06 55.1 44 50.0
C09p64390 Brassica napus HOM05D000310 ORTHO05D002456 4.7e-06 54.7 43 51.2
Cfa009792 Carpinus fangiana HOM05D000310 ORTHO05D002456 4.7e-06 54.7 41 51.2
COL.COLO4_05363 Corchorus olitorius HOM05D000310 ORTHO05D002456 4.7e-06 54.7 44 54.5
Migut.D00620 Erythranthe guttata HOM05D000310 ORTHO05D002456 4.7e-06 54.7 44 54.5
Lsat_1_v5_gn_2_59260 Lactuca sativa HOM05D000310 ORTHO05D002456 4.7e-06 54.7 98 36.7
SalBow4G1306 Salvia bowleyana HOM05D000310 ORTHO05D002456 4.7e-06 54.7 39 53.8
SGA_v2.0_scaffold1G00737 Striga asiatica HOM05D000310 ORTHO05D002456 4.7e-06 54.7 44 50.0
Actinidia11673 Actinidia chinensis HOM05D000310 ORTHO05D002456 6.2e-06 54.3 89 39.3
CSS0035519 Camellia sinensis var. sinensis HOM05D000310 ORTHO05D002456 6.2e-06 54.3 38 57.9
THA.LOC104811175 Tarenaya hassleriana HOM05D000310 ORTHO05D002456 6.2e-06 54.3 44 47.7
BcaB08g37006 Brassica carinata HOM05D000310 ORTHO05D002456 8.1e-06 53.9 45 51.1
A10p25360 Brassica napus HOM05D000310 ORTHO05D002456 8.1e-06 53.9 42 52.4
BraA10t44599Z Brassica rapa HOM05D000310 ORTHO05D002456 8.1e-06 53.9 42 52.4
CSS0000640 Camellia sinensis var. sinensis HOM05D000310 ORTHO05D002456 8.1e-06 53.9 112 33.9
CAN.G71.22 Capsicum annuum HOM05D000310 ORTHO05D002456 8.1e-06 53.9 114 36.0
Peaxi162Scf00675g00711 Petunia axillaris HOM05D000310 ORTHO05D002456 8.1e-06 53.9 96 39.6
QL01p004247 Quercus lobata HOM05D000310 ORTHO05D002456 8.1e-06 53.9 110 34.5


User provided reference genes

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