Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g099650.2 Solanum lycopersicum HOM05D004268 ORTHO05D004958 2.3e-36 155.6 114 100.0
PGSC0003DMG400004639 Solanum tuberosum HOM05D004268 ORTHO05D004958 6.4e-31 137.5 114 87.7
Nitab4.5_0004438g0050 Nicotiana tabacum HOM05D004268 ORTHO05D004958 3.8e-23 111.7 115 83.5
Nitab4.5_0000570g0060 Nicotiana tabacum HOM05D004268 ORTHO05D004958 1.3e-20 103.2 115 81.7
Peaxi162Scf00032g00063 Petunia axillaris HOM05D004268 ORTHO05D004958 5.4e-14 81.3 111 51.4
Peaxi162Scf00004g00263 Petunia axillaris HOM05D004268 ORTHO05D004958 1.3e-12 76.6 110 48.2
Lsat_1_v5_gn_6_25460 Lactuca sativa HOM05D004268 ORTHO05D004958 2.5e-11 72.4 113 48.7
Cc06_g23280 Coffea canephora HOM05D004268 ORTHO05D004958 5.6e-11 71.2 111 47.7
Potri.009G052500 Populus trichocarpa HOM05D004268 ORTHO05D004958 2.1e-10 69.3 111 54.1
Manes.06G163500 Manihot esculenta HOM05D004268 ORTHO05D004958 6.2e-10 67.8 111 43.2
Potri.001G256900 Populus trichocarpa HOM05D004268 ORTHO05D004958 8.1e-10 67.4 110 45.5
Haze_23147 Corylus avellana HOM05D004268 ORTHO05D004958 9.0e-09 63.9 111 37.8
DCAR_029953 Daucus carota HOM05D004268 ORTHO05D004958 9.0e-09 63.9 112 42.0
Hma1.2p1_0368F.1_g137310 Hydrangea macrophylla HOM05D004268 ORTHO05D004958 9.0e-09 63.9 111 39.6
DCAR_002077 Daucus carota HOM05D004268 ORTHO05D004958 2.6e-08 62.4 116 43.1
Medtr3g030850 Medicago truncatula HOM05D004268 ORTHO05D004958 2.6e-08 62.4 112 42.0
Prupe.4G250700 Prunus persica HOM05D004268 ORTHO05D004958 2.6e-08 62.4 111 58.6
Aa31LG10G3570 Aethionema arabicum HOM05D004268 ORTHO05D004958 3.4e-08 62.0 117 39.3
Manes.14G003500 Manihot esculenta HOM05D004268 ORTHO05D004958 3.4e-08 62.0 111 55.0
Medtr4g037505 Medicago truncatula HOM05D004268 ORTHO05D004958 4.5e-08 61.6 111 40.5
Psat5g208760 Pisum sativum HOM05D004268 ORTHO05D004958 7.6e-08 60.8 112 41.1
TPR.G35305 Trifolium pratense HOM05D004268 ORTHO05D004958 7.6e-08 60.8 111 42.3
Psat7g196400 Pisum sativum HOM05D004268 ORTHO05D004958 9.9e-08 60.5 111 40.5
QL01p004491 Quercus lobata HOM05D004268 ORTHO05D004958 9.9e-08 60.5 111 50.5
Actinidia23976 Actinidia chinensis HOM05D004268 ORTHO05D004958 1.3e-07 60.1 115 40.0
CANSAT54G2544 Cannabis sativa HOM05D004268 ORTHO05D004958 1.7e-07 59.7 112 58.9
Ciclev10017247m.g Citrus clementina HOM05D004268 ORTHO05D004958 1.7e-07 59.7 112 47.3
TPR.G35302 Trifolium pratense HOM05D004268 ORTHO05D004958 1.7e-07 59.7 112 44.6
Gohir.A09G113900 Gossypium hirsutum HOM05D004268 ORTHO05D004958 2.2e-07 59.3 113 39.8
Gohir.D09G110500 Gossypium hirsutum HOM05D004268 ORTHO05D004958 2.2e-07 59.3 113 39.8
HanXRQChr13g0401101 Helianthus annuus HOM05D004268 ORTHO05D004958 2.2e-07 59.3 114 57.9
Thhalv10021813m.g Eutrema salsugineum HOM05D004268 ORTHO05D004958 3.8e-07 58.5 111 39.6
Glyma.10G089300 Glycine max HOM05D004268 ORTHO05D004958 3.8e-07 58.5 111 40.5
BcaC01g03530 Brassica carinata HOM05D004268 ORTHO05D004958 4.9e-07 58.2 111 45.0
C03p51410 Brassica napus HOM05D004268 ORTHO05D004958 4.9e-07 58.2 111 39.6
BolC3t17427H Brassica oleracea HOM05D004268 ORTHO05D004958 4.9e-07 58.2 111 45.0
Ca_14452_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 4.9e-07 58.2 111 42.3
Ca_14453_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 4.9e-07 58.2 111 42.3
DCAR_031628 Daucus carota HOM05D004268 ORTHO05D004958 4.9e-07 58.2 116 39.7
Lj3g0019333 Lotus japonicus HOM05D004268 ORTHO05D004958 4.9e-07 58.2 113 40.7
PGR102G2953 Punica granatum HOM05D004268 ORTHO05D004958 4.9e-07 58.2 113 37.2
BraA05t21659Z Brassica rapa HOM05D004268 ORTHO05D004958 6.4e-07 57.8 111 37.8
Cpa.g.sc84.45 Carica papaya HOM05D004268 ORTHO05D004958 6.4e-07 57.8 109 34.9
BraA01t03491Z Brassica rapa HOM05D004268 ORTHO05D004958 8.4e-07 57.4 111 58.6
CARHR041550 Cardamine hirsuta HOM05D004268 ORTHO05D004958 8.4e-07 57.4 114 38.6
BcaC09g49044 Brassica carinata HOM05D004268 ORTHO05D004958 1.1e-06 57.0 112 50.9
Cfa009783 Carpinus fangiana HOM05D004268 ORTHO05D004958 1.1e-06 57.0 109 35.8
MD03G1173700 Malus domestica HOM05D004268 ORTHO05D004958 1.1e-06 57.0 113 54.9
Medtr3g030860 Medicago truncatula HOM05D004268 ORTHO05D004958 1.1e-06 57.0 110 40.0
QL01p004584 Quercus lobata HOM05D004268 ORTHO05D004958 1.1e-06 57.0 112 36.6
A01p33800 Brassica napus HOM05D004268 ORTHO05D004958 1.4e-06 56.6 111 58.6
BraA03t13354Z Brassica rapa HOM05D004268 ORTHO05D004958 1.4e-06 56.6 111 38.7
Migut.D00609 Erythranthe guttata HOM05D004268 ORTHO05D004958 1.4e-06 56.6 31 80.6
BcaC05g28213 Brassica carinata HOM05D004268 ORTHO05D004958 1.9e-06 56.2 111 36.9
C05p43040 Brassica napus HOM05D004268 ORTHO05D004958 1.9e-06 56.2 111 36.9
BolC5t33035H Brassica oleracea HOM05D004268 ORTHO05D004958 1.9e-06 56.2 111 36.9
Thhalv10011883m.g Eutrema salsugineum HOM05D004268 ORTHO05D004958 1.9e-06 56.2 114 36.8
Sp3g19010 Schrenkiella parvula HOM05D004268 ORTHO05D004958 1.9e-06 56.2 111 60.4
AL3G35000 Arabidopsis lyrata HOM05D004268 ORTHO05D004958 2.4e-06 55.8 110 36.4
CiPaw.14G118100 Carya illinoinensis HOM05D004268 ORTHO05D004958 2.4e-06 55.8 112 37.5
QL04p008292 Quercus lobata HOM05D004268 ORTHO05D004958 2.4e-06 55.8 113 39.8
A05p27660 Brassica napus HOM05D004268 ORTHO05D004958 3.2e-06 55.5 111 36.0
AL1G59250 Arabidopsis lyrata HOM05D004268 ORTHO05D004958 4.2e-06 55.1 114 37.7
AT3G21055 Arabidopsis thaliana HOM05D004268 ORTHO05D004958 4.2e-06 55.1 110 36.4
C01p43220 Brassica napus HOM05D004268 ORTHO05D004958 4.2e-06 55.1 111 51.4
BcaB06g26173 Brassica carinata HOM05D004268 ORTHO05D004958 5.5e-06 54.7 111 36.9
CARHR096900 Cardamine hirsuta HOM05D004268 ORTHO05D004958 5.5e-06 54.7 110 36.4
FAN21G1561 Fragaria x ananassa HOM05D004268 ORTHO05D004958 5.5e-06 54.7 111 51.4
HanXRQChr02g0052031 Helianthus annuus HOM05D004268 ORTHO05D004958 5.5e-06 54.7 114 39.5
Nitab4.5_0004741g0020 Nicotiana tabacum HOM05D004268 ORTHO05D004958 5.5e-06 54.7 98 36.7
BolC1t04268H Brassica oleracea HOM05D004268 ORTHO05D004958 7.1e-06 54.3 111 57.7
ECA233G4176 Erigeron canadensis HOM05D004268 ORTHO05D004958 7.1e-06 54.3 116 50.0


User provided reference genes

Program Settings