Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g099500.2 Solanum lycopersicum HOM05D006680 ORTHO05D008206 3.2e-57 224.9 120 100.0
Sopen12g034170 Solanum pennellii HOM05D006680 ORTHO05D008206 3.2e-57 224.9 120 100.0
PGSC0003DMG400004705 Solanum tuberosum HOM05D006680 ORTHO05D008206 3.3e-54 214.9 121 95.9
Nitab4.5_0003466g0010 Nicotiana tabacum HOM05D006680 ORTHO05D008206 1.7e-50 202.6 119 86.6
Peaxi162Scf00646g00027 Petunia axillaris HOM05D006680 ORTHO05D008206 5.1e-47 191.0 116 84.5
CAN.G129.31 Capsicum annuum HOM05D006680 ORTHO05D008206 2.0e-46 189.1 116 80.2
Peaxi162Scf00246g00103 Petunia axillaris HOM05D006680 ORTHO05D008206 5.7e-46 187.6 116 81.9
Nitab4.5_0002761g0070 Nicotiana tabacum HOM05D006680 ORTHO05D008206 3.7e-45 184.9 114 81.6
Sopen01g028370 Solanum pennellii HOM05D006680 ORTHO05D008206 3.7e-45 184.9 116 78.4
PGSC0003DMG400011317 Solanum tuberosum HOM05D006680 ORTHO05D008206 8.2e-45 183.7 116 77.6
Migut.G00148 Erythranthe guttata HOM05D006680 ORTHO05D008206 3.1e-44 181.8 116 76.7
Oeu001107.1 Olea europaea HOM05D006680 ORTHO05D008206 2.6e-43 178.7 116 76.7
Oeu063359.1 Olea europaea HOM05D006680 ORTHO05D008206 5.9e-43 177.6 116 77.6
Cc03_g01760 Coffea canephora HOM05D006680 ORTHO05D008206 5.0e-42 174.5 116 74.1
CAN.G484.39 Capsicum annuum HOM05D006680 ORTHO05D008206 2.5e-41 172.2 112 82.1
SGA_v2.0_scaffold67G22622 Striga asiatica HOM05D006680 ORTHO05D008206 1.2e-40 169.9 116 70.7
MSTRG.3906 Avicennia marina HOM05D006680 ORTHO05D008206 3.6e-40 168.3 116 71.6
DCAR_027070 Daucus carota HOM05D006680 ORTHO05D008206 1.0e-39 166.8 115 70.4
Lsat_1_v5_gn_6_95660 Lactuca sativa HOM05D006680 ORTHO05D008206 1.4e-39 166.4 113 72.6
ClCG00G005610 Citrullus lanatus HOM05D006680 ORTHO05D008206 8.8e-39 163.7 116 71.6
Ciclev10006049m.g Citrus clementina HOM05D006680 ORTHO05D008206 1.5e-38 162.9 117 72.6
MD13G1167200 Malus domestica HOM05D006680 ORTHO05D008206 1.5e-38 162.9 118 72.9
ECA240G4018 Erigeron canadensis HOM05D006680 ORTHO05D008206 2.0e-38 162.5 122 70.5
CSS0014864 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 2.6e-38 162.2 114 71.1
QL06p009590 Quercus lobata HOM05D006680 ORTHO05D008206 2.6e-38 162.2 116 70.7
Lalb_Chr13g0303561 Lupinus albus HOM05D006680 ORTHO05D008206 5.7e-38 161.0 113 74.3
VMungo1215G2846 Vigna mungo HOM05D006680 ORTHO05D008206 5.7e-38 161.0 110 74.5
CSS0010580 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 7.4e-38 160.6 114 71.1
Prupe.1G134500 Prunus persica HOM05D006680 ORTHO05D008206 7.4e-38 160.6 119 70.6
Cpa.g.sc16.184 Carica papaya HOM05D006680 ORTHO05D008206 9.7e-38 160.2 120 70.0
RcHm_v2.0_Chr4g0422811 Rosa chinensis HOM05D006680 ORTHO05D008206 9.7e-38 160.2 119 72.3
CiPaw.01G147500 Carya illinoinensis HOM05D006680 ORTHO05D008206 1.3e-37 159.8 116 68.1
Dinv29759 Davidia involucrata HOM05D006680 ORTHO05D008206 1.3e-37 159.8 112 69.6
Sabra10G0008200 Salix brachista HOM05D006680 ORTHO05D008206 1.7e-37 159.5 112 73.2
TWI09G0327 Tripterygium wilfordii HOM05D006680 ORTHO05D008206 2.2e-37 159.1 114 69.3
Atru.chr4.2870 Acer truncatum HOM05D006680 ORTHO05D008206 2.8e-37 158.7 118 67.8
Lalb_Chr07g0177791 Lupinus albus HOM05D006680 ORTHO05D008206 2.8e-37 158.7 114 72.8
HanXRQChr13g0419971 Helianthus annuus HOM05D006680 ORTHO05D008206 3.7e-37 158.3 116 69.8
Thecc.04G286300 Theobroma cacao HOM05D006680 ORTHO05D008206 6.3e-37 157.5 116 69.8
DCAR_002469 Daucus carota HOM05D006680 ORTHO05D008206 1.8e-36 156.0 116 68.1
FAN07G2082 Fragaria x ananassa HOM05D006680 ORTHO05D008206 1.8e-36 156.0 119 68.9
FAN12G3601 Fragaria x ananassa HOM05D006680 ORTHO05D008206 1.8e-36 156.0 119 68.9
FAN17G1034 Fragaria x ananassa HOM05D006680 ORTHO05D008206 1.8e-36 156.0 119 68.9
FvH4_4g18340 Fragaria vesca HOM05D006680 ORTHO05D008206 3.1e-36 155.2 119 68.9
Manes.15G011600 Manihot esculenta HOM05D006680 ORTHO05D008206 3.1e-36 155.2 119 67.2
Gohir.A10G164900 Gossypium hirsutum HOM05D006680 ORTHO05D008206 4.1e-36 154.8 112 72.3
Gohir.D10G171100 Gossypium hirsutum HOM05D006680 ORTHO05D008206 4.1e-36 154.8 112 72.3
Gorai.011G191100 Gossypium raimondii HOM05D006680 ORTHO05D008206 4.1e-36 154.8 112 72.3
Manes.03G196700 Manihot esculenta HOM05D006680 ORTHO05D008206 4.1e-36 154.8 116 68.1
CiPaw.02G082300 Carya illinoinensis HOM05D006680 ORTHO05D008206 5.3e-36 154.5 116 66.4
FAN12G3976 Fragaria x ananassa HOM05D006680 ORTHO05D008206 5.3e-36 154.5 119 68.9
Hma1.2p1_1185F.1_g265000 Hydrangea macrophylla HOM05D006680 ORTHO05D008206 9.1e-36 153.7 112 66.1
THA.LOC104818922 Tarenaya hassleriana HOM05D006680 ORTHO05D008206 1.5e-35 152.9 107 72.9
Potri.010G013100 Populus trichocarpa HOM05D006680 ORTHO05D008206 2.6e-35 152.1 112 70.5
Ah.08g214570 Amaranthus hybridus HOM05D006680 ORTHO05D008206 4.5e-35 151.4 117 73.5
BraA05t22848Z Brassica rapa HOM05D006680 ORTHO05D008206 4.5e-35 151.4 107 72.9
Potri.008G221000 Populus trichocarpa HOM05D006680 ORTHO05D008206 5.9e-35 151.0 112 69.6
A03p34950 Brassica napus HOM05D006680 ORTHO05D008206 1.0e-34 150.2 107 72.0
C03p42530 Brassica napus HOM05D006680 ORTHO05D008206 1.0e-34 150.2 107 72.0
BolC3t16523H Brassica oleracea HOM05D006680 ORTHO05D008206 1.0e-34 150.2 107 72.0
BraA03t12675Z Brassica rapa HOM05D006680 ORTHO05D008206 1.0e-34 150.2 107 72.0
Sc19g0005290 Simmondsia chinensis HOM05D006680 ORTHO05D008206 1.3e-34 149.8 117 69.2
Sc19g0005370 Simmondsia chinensis HOM05D006680 ORTHO05D008206 1.3e-34 149.8 117 69.2
Ca_21488_v3 Cicer arietinum L. HOM05D006680 ORTHO05D008206 1.7e-34 149.4 111 72.1
Gohir.A09G238300 Gossypium hirsutum HOM05D006680 ORTHO05D008206 1.7e-34 149.4 109 71.6
Gohir.D09G239200 Gossypium hirsutum HOM05D006680 ORTHO05D008206 2.2e-34 149.1 109 71.6
Gorai.006G261900 Gossypium raimondii HOM05D006680 ORTHO05D008206 2.2e-34 149.1 109 71.6
BcaC05g29822 Brassica carinata HOM05D006680 ORTHO05D008206 3.8e-34 148.3 108 72.2
BolC5t34701H Brassica oleracea HOM05D006680 ORTHO05D008206 3.8e-34 148.3 108 72.2
A05p41250 Brassica napus HOM05D006680 ORTHO05D008206 5.0e-34 147.9 107 72.0
TAR370G0002 Trochodendron aralioides HOM05D006680 ORTHO05D008206 8.5e-34 147.1 114 67.5
Duzib212G0294 Durio zibethinus HOM05D006680 ORTHO05D008206 1.1e-33 146.7 114 71.1
Nn4g25792 Nelumbo nucifera HOM05D006680 ORTHO05D008206 1.4e-33 146.4 116 64.7
Aqoxy2G02951 Aquilegia oxysepala HOM05D006680 ORTHO05D008206 2.5e-33 145.6 119 67.2
Lj4g0016566 Lotus japonicus HOM05D006680 ORTHO05D008206 2.5e-33 145.6 93 79.6
AUR62040379 Chenopodium quinoa HOM05D006680 ORTHO05D008206 4.2e-33 144.8 117 70.1
Glyma.07G246700 Glycine max HOM05D006680 ORTHO05D008206 4.2e-33 144.8 114 65.8
Medtr4g120020 Medicago truncatula HOM05D006680 ORTHO05D008206 5.5e-33 144.4 110 69.1
Duzib151G0306 Durio zibethinus HOM05D006680 ORTHO05D008206 1.6e-32 142.9 113 69.0
CARHR081510 Cardamine hirsuta HOM05D006680 ORTHO05D008206 8.0e-32 140.6 94 75.5
Thhalv10021931m.g Eutrema salsugineum HOM05D006680 ORTHO05D008206 2.3e-31 139.0 95 72.6
Carub.0003s0642 Capsella rubella HOM05D006680 ORTHO05D008206 3.0e-31 138.7 94 74.5
AT3G06890 Arabidopsis thaliana HOM05D006680 ORTHO05D008206 3.9e-31 138.3 94 75.5
AL3G18020 Arabidopsis lyrata HOM05D006680 ORTHO05D008206 5.2e-31 137.9 94 75.5
TPR.G3164 Trifolium pratense HOM05D006680 ORTHO05D008206 1.1e-30 136.7 93 74.2
Sed0015603 Sechium edule HOM05D006680 ORTHO05D008206 1.5e-30 136.3 116 60.3
Psat4g026840 Pisum sativum HOM05D006680 ORTHO05D008206 2.0e-30 136.0 94 72.3
Nn3g21479 Nelumbo nucifera HOM05D006680 ORTHO05D008206 2.6e-30 135.6 103 68.0
MBI19_g25353_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 5.7e-30 134.4 114 61.4
Phvul.003G097003 Phaseolus vulgaris HOM05D006680 ORTHO05D008206 2.2e-29 132.5 94 72.3
DCAR_030521 Daucus carota HOM05D006680 ORTHO05D008206 2.8e-29 132.1 116 60.3
PSO832G1781 Papaver somniferum HOM05D006680 ORTHO05D008206 2.8e-29 132.1 122 62.3
Sp3g05850 Schrenkiella parvula HOM05D006680 ORTHO05D008206 4.8e-29 131.3 93 69.9
PSO210G6323 Papaver somniferum HOM05D006680 ORTHO05D008206 8.2e-29 130.6 122 63.1
Sabra10G0008300 Salix brachista HOM05D006680 ORTHO05D008206 8.2e-29 130.6 113 61.9
CANSAT78G1139 Cannabis sativa HOM05D006680 ORTHO05D008206 5.3e-28 127.9 92 70.7
PGR031G3343 Punica granatum HOM05D006680 ORTHO05D008206 1.2e-27 126.7 118 54.2
HanXRQChr03g0089341 Helianthus annuus HOM05D006680 ORTHO05D008206 2.6e-27 125.6 116 57.8
ATR0796G044 Amborella trichopoda HOM05D006680 ORTHO05D008206 5.9e-27 124.4 118 58.5
PSO170G5007 Papaver somniferum HOM05D006680 ORTHO05D008206 2.2e-26 122.5 98 73.5
PSO017G4993 Papaver somniferum HOM05D006680 ORTHO05D008206 5.0e-26 121.3 98 72.4
PGR004G0310 Punica granatum HOM05D006680 ORTHO05D008206 6.5e-26 120.9 113 59.3
MD16G1168200 Malus domestica HOM05D006680 ORTHO05D008206 1.6e-24 116.3 122 60.7
MBI18_g06870_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 2.1e-24 115.9 113 57.5
HPP92_000110 Vanilla planifolia HOM05D006680 ORTHO05D008206 2.3e-23 112.5 107 56.1
unitig_32.g11869 Utricularia gibba HOM05D006680 ORTHO05D008206 1.5e-22 109.8 113 53.1
Os03g0343800 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 2.0e-22 109.4 110 54.5
Rhsim04G0223700 Rhododendron simsii HOM05D006680 ORTHO05D008206 2.4e-20 102.4 88 58.0
Rhsim09G0007300 Rhododendron simsii HOM05D006680 ORTHO05D008206 2.4e-20 102.4 88 58.0
Thecc.09G272700 Theobroma cacao HOM05D006680 ORTHO05D008206 7.0e-20 100.9 82 64.6
Zm00001eb016470 Zea mays HOM05D006680 ORTHO05D008206 9.1e-20 100.5 114 50.0
Thecc.05G268700 Theobroma cacao HOM05D006680 ORTHO05D008206 2.2e-18 95.9 88 60.2
Zm00001eb124100 Zea mays HOM05D006680 ORTHO05D008206 3.8e-18 95.1 108 49.1
Eucgr.H03932 Eucalyptus grandis HOM05D006680 ORTHO05D008206 8.5e-18 94.0 115 50.4
Zm00001eb394930 Zea mays HOM05D006680 ORTHO05D008206 9.4e-17 90.5 93 53.8
TAR633G0386 Trochodendron aralioides HOM05D006680 ORTHO05D008206 5.2e-15 84.7 119 46.2
SalBow5G0837 Salvia bowleyana HOM05D006680 ORTHO05D008206 2.4e-12 75.9 118 37.3
Os07g0673801 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 1.6e-11 73.2 94 44.7
MELO3C006671.2 Cucumis melo HOM05D006680 ORTHO05D008206 1.2e-08 63.5 52 59.6
Oeu057714.1 Olea europaea HOM05D006680 ORTHO05D008206 3.4e-06 55.5 48 54.2


User provided reference genes

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