Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g099020.2 Solanum lycopersicum HOM05D005582 ORTHO05D037472 2.0e-67 258.8 121 100.0
Sopen12g033750 Solanum pennellii HOM05D005582 ORTHO05D007028 2.2e-66 255.4 119 100.0
Nitab4.5_0000895g0160 Nicotiana tabacum HOM05D005582 ORTHO05D007028 1.1e-41 173.3 104 78.8
CAN.G484.83 Capsicum annuum HOM05D005582 ORTHO05D007028 2.5e-41 172.2 104 78.8
Nitab4.5_0004665g0020 Nicotiana tabacum HOM05D005582 ORTHO05D007028 2.5e-41 172.2 104 80.8
Dinv29525 Davidia involucrata HOM05D005582 ORTHO05D007028 4.3e-25 118.2 97 56.7
Nn4g25411 Nelumbo nucifera HOM05D005582 ORTHO05D007028 2.6e-22 109.0 87 57.5
Lj3C839G18 Lonicera japonica HOM05D005582 ORTHO05D007028 7.5e-22 107.5 104 48.1
CSS0025323 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 3.7e-21 105.1 100 50.0
Gohir.D09G066800 Gossypium hirsutum HOM05D005582 ORTHO05D007028 1.4e-20 103.2 90 56.7
Gorai.006G081300 Gossypium raimondii HOM05D005582 ORTHO05D007028 1.4e-20 103.2 90 56.7
Hund12246 Selenicereus undatus HOM05D005582 ORTHO05D007028 1.9e-20 102.8 118 42.4
GSVIVG01017662001 Vitis vinifera HOM05D005582 ORTHO05D007028 1.9e-20 102.8 103 50.5
GSVIVG01017603001 Vitis vinifera HOM05D005582 ORTHO05D007028 7.0e-20 100.9 102 50.0
Gohir.A09G067200 Gossypium hirsutum HOM05D005582 ORTHO05D007028 1.2e-19 100.1 90 55.6
Thecc.04G310500 Theobroma cacao HOM05D005582 ORTHO05D007028 3.5e-19 98.6 79 55.7
TAR362G1290 Trochodendron aralioides HOM05D005582 ORTHO05D007028 1.0e-18 97.1 80 57.5
CiPaw.02G071000 Carya illinoinensis HOM05D005582 ORTHO05D007028 1.3e-18 96.7 119 43.7
Ah.07g203770 Amaranthus hybridus HOM05D005582 ORTHO05D007028 1.7e-18 96.3 87 48.3
Prupe.1G108200 Prunus persica HOM05D005582 ORTHO05D007028 3.0e-18 95.5 106 43.4
Rhsim04G0247200 Rhododendron simsii HOM05D005582 ORTHO05D007028 3.0e-18 95.5 111 45.9
Lsat_1_v5_gn_6_117861 Lactuca sativa HOM05D001037 ORTHO05D007028 3.9e-18 95.1 90 46.7
Oeu022697.1 Olea europaea HOM05D005582 ORTHO05D007028 3.9e-18 95.1 72 61.1
MD13G1143700 Malus domestica HOM05D005582 ORTHO05D007028 5.0e-18 94.7 88 47.7
Duzib151G1162 Durio zibethinus HOM05D005582 ORTHO05D007028 6.6e-18 94.4 90 47.8
Sc25g0001750 Simmondsia chinensis HOM05D005582 ORTHO05D007028 8.6e-18 94.0 87 51.7
AUR62002565 Chenopodium quinoa HOM05D005582 ORTHO05D007028 1.1e-17 93.6 84 50.0
Ciclev10004134m.g Citrus clementina HOM05D005582 ORTHO05D007028 1.9e-17 92.8 88 51.1
Migut.N00012 Erythranthe guttata HOM05D005582 ORTHO05D007028 4.3e-17 91.7 110 47.3
Aa31LG11G11190 Aethionema arabicum HOM05D005582 ORTHO05D007028 1.2e-16 90.1 85 48.2
AT5G18525 Arabidopsis thaliana HOM05D005582 ORTHO05D007028 1.2e-16 90.1 130 37.7
HanXRQChr05g0148391 Helianthus annuus HOM05D005582 ORTHO05D007028 1.2e-16 90.1 111 39.6
FvH4_4g21250 Fragaria vesca HOM05D005582 ORTHO05D007028 1.6e-16 89.7 81 49.4
BcaC04g18671 Brassica carinata HOM05D005582 ORTHO05D007028 2.1e-16 89.4 120 38.3
vmacro08001 Vaccinium macrocarpon HOM05D005582 ORTHO05D007028 2.1e-16 89.4 116 44.0
CARHR194490 Cardamine hirsuta HOM05D005582 ORTHO05D007028 2.8e-16 89.0 120 39.2
Medtr1g102710 Medicago truncatula HOM05D005582 ORTHO05D007028 3.6e-16 88.6 81 54.3
Thhalv10012423m.g Eutrema salsugineum HOM05D005582 ORTHO05D007028 4.7e-16 88.2 126 40.5
PSO170G3214 Papaver somniferum HOM05D005582 ORTHO05D007028 4.7e-16 88.2 82 50.0
FAN07G0038 Fragaria x ananassa HOM05D005582 ORTHO05D007028 6.2e-16 87.8 81 49.4
Lj5g0009067 Lotus japonicus HOM05D005582 ORTHO05D007028 6.2e-16 87.8 84 48.8
AUR62029987 Chenopodium quinoa HOM05D005582 ORTHO05D007028 8.1e-16 87.4 87 46.0
PGR031G2985 Punica granatum HOM05D005582 ORTHO05D007028 8.1e-16 87.4 72 58.3
Manes.15G004000 Manihot esculenta HOM05D005582 ORTHO05D007028 1.1e-15 87.0 81 48.1
AL6G29800 Arabidopsis lyrata HOM05D005582 ORTHO05D007028 1.4e-15 86.7 128 39.1
BolC9t58663H Brassica oleracea HOM05D005582 ORTHO05D007028 4.0e-15 85.1 127 37.0
VMungo0720G3059 Vigna mungo HOM05D005582 ORTHO05D007028 4.0e-15 85.1 87 49.4
C09p57960 Brassica napus HOM05D005582 ORTHO05D007028 5.2e-15 84.7 121 38.0
DCAR_023392 Daucus carota HOM05D005582 ORTHO05D007028 5.2e-15 84.7 72 52.8
FAN12G2136 Fragaria x ananassa HOM05D005582 ORTHO05D007028 5.2e-15 84.7 83 48.2
arahy.Tifrunner.gnm1.ann1.6ZCT8S Arachis hypogaea HOM05D005582 ORTHO05D007028 8.9e-15 84.0 82 47.6
arahy.Tifrunner.gnm1.ann1.ZZ97E1 Arachis hypogaea HOM05D005582 ORTHO05D007028 8.9e-15 84.0 82 47.6
Phvul.007G062300 Phaseolus vulgaris HOM05D005582 ORTHO05D007028 8.9e-15 84.0 87 49.4
ECA246G0223 Erigeron canadensis HOM05D005582 ORTHO05D007028 1.2e-14 83.6 117 41.9
EL10Ac3g06266 Beta vulgaris HOM05D005582 ORTHO05D007028 2.0e-14 82.8 70 52.9
SGA_v2.0_scaffold227G43203 Striga asiatica HOM05D005582 ORTHO05D007028 2.0e-14 82.8 106 39.6
Glyma.20G150800 Glycine max HOM05D005582 ORTHO05D007028 2.6e-14 82.4 86 47.7
BcaB08g36667 Brassica carinata HOM05D005582 ORTHO05D007028 4.4e-14 81.6 125 37.6
A10p21030 Brassica napus HOM05D005582 ORTHO05D007028 4.4e-14 81.6 83 47.0
BraA10t44167Z Brassica rapa HOM05D005582 ORTHO05D007028 4.4e-14 81.6 83 47.0
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 4.4e-14 81.6 94 45.7
Sabra10G0117900 Salix brachista HOM05D005582 ORTHO05D007028 5.8e-14 81.3 84 48.8
TWI53G0357 Tripterygium wilfordii HOM05D005582 ORTHO05D007028 5.8e-14 81.3 81 48.1
BcaB08g36665 Brassica carinata HOM05D005582 ORTHO05D007028 9.8e-14 80.5 119 37.0
MELO3C021237.2 Cucumis melo HOM05D005582 ORTHO05D007028 9.8e-14 80.5 96 39.6
Glyma.10G243400 Glycine max HOM05D005582 ORTHO05D007028 9.8e-14 80.5 82 48.8
Sp6g25800 Schrenkiella parvula HOM05D005582 ORTHO05D007028 9.8e-14 80.5 82 43.9
unitig_26.g10616 Utricularia gibba HOM05D005582 ORTHO05D007028 9.8e-14 80.5 73 50.7
CsaV3_6G000150 Cucumis sativus L. HOM05D005582 ORTHO05D007028 1.3e-13 80.1 107 36.4
Atru.chr11.54 Acer truncatum HOM05D005582 ORTHO05D007028 1.7e-13 79.7 100 45.0
Lalb_Chr06g0160761 Lupinus albus HOM05D005582 ORTHO05D007028 1.7e-13 79.7 83 43.4
THA.LOC104818852 Tarenaya hassleriana HOM05D005582 ORTHO05D007028 1.7e-13 79.7 96 42.7
SalBow5G3991 Salvia bowleyana HOM05D005582 ORTHO05D007028 2.2e-13 79.3 70 50.0
Potri.010G153300 Populus trichocarpa HOM05D005582 ORTHO05D007028 3.7e-13 78.6 119 39.5
QL06p013845 Quercus lobata HOM05D005582 ORTHO05D007028 6.4e-13 77.8 76 48.7
QL93p1872_0012 Quercus lobata HOM05D005582 ORTHO05D007028 8.3e-13 77.4 76 48.7
Sed0007110 Sechium edule HOM05D005582 ORTHO05D007028 2.4e-12 75.9 101 33.7
Aqoxy5G02775 Aquilegia oxysepala HOM05D005582 ORTHO05D007028 2.1e-11 72.8 81 48.1
ClCG06G004260 Citrullus lanatus HOM05D005582 ORTHO05D007028 1.3e-10 70.1 108 35.2
Cc03_g00260 Coffea canephora HOM05D005582 ORTHO05D007028 2.1e-08 62.8 84 41.7
TPR.G26104 Trifolium pratense HOM05D005582 ORTHO05D007028 8.1e-08 60.8 66 43.9
RcHm_v2.0_Chr4g0426861 Rosa chinensis HOM05D005582 ORTHO05D037472 1.1e-07 60.5 42 59.5
CANSAT01G1159 Cannabis sativa HOM05D005582 ORTHO05D007028 2.3e-07 59.3 89 37.1


User provided reference genes

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