Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 8.3e-206 720.3 410 100.0
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 2.2e-198 695.7 411 96.6
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 3.2e-181 638.6 416 90.1
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 2.8e-121 439.5 437 65.4
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.7e-118 430.3 437 64.3
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 9.4e-109 397.9 440 63.9
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 6.1e-108 395.2 433 62.8
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 1.6e-47 194.5 418 41.1
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 1.7e-41 174.5 423 39.7
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 6.5e-41 172.6 422 39.3
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 8.4e-41 172.2 411 37.7
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 1.1e-40 171.8 422 40.5
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 2.5e-40 170.6 321 41.7
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 3.2e-40 170.2 411 37.2
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 4.2e-40 169.9 400 36.8
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 2.1e-39 167.5 423 35.7
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 6.0e-39 166.0 428 34.8
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.3e-38 164.9 427 36.1
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.8e-38 164.5 378 41.5
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 3.0e-38 163.7 410 41.0
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 6.7e-38 162.5 431 41.5
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.5e-37 161.4 428 35.7
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 9.6e-37 158.7 428 34.6
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.3e-36 158.3 411 37.5
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.6e-36 157.9 359 41.8
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 3.7e-36 156.8 401 36.4
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 1.1e-35 155.2 421 35.6
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 4.1e-35 153.3 408 36.8
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 5.3e-35 152.9 420 40.0
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 1.0e-33 148.7 370 33.5
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 2.2e-33 147.5 376 36.2
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 8.4e-33 145.6 404 38.1
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 1.9e-32 144.4 385 34.8
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 1.9e-32 144.4 425 39.3
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 3.2e-32 143.7 416 40.1
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 4.2e-32 143.3 365 40.8
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 7.2e-32 142.5 429 38.2
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 2.1e-31 141.0 402 32.1
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 2.7e-31 140.6 410 34.6
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 4.6e-31 139.8 381 37.8
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 1.3e-30 138.3 412 34.0
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 1.3e-30 138.3 403 37.2
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 6.7e-30 136.0 331 34.4
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 8.7e-30 135.6 435 35.6
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.1e-29 135.2 378 41.0
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 1.1e-29 135.2 416 36.8
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 2.5e-29 134.0 424 34.9
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 3.3e-29 133.7 410 37.3
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 4.3e-29 133.3 363 39.9
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 4.3e-29 133.3 426 34.5
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 4.3e-29 133.3 413 36.3
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 1.3e-28 131.7 411 37.5
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.6e-28 131.3 420 37.4
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 2.2e-28 131.0 372 33.6
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 2.8e-28 130.6 374 37.4
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.8e-28 130.6 420 36.0
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 1.4e-27 128.3 422 35.1
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 2.4e-27 127.5 419 36.3
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.4e-27 127.5 364 38.2
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 5.3e-27 126.3 396 34.8
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.2e-26 125.2 419 33.4
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 1.2e-26 125.2 412 35.2
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.5e-26 124.8 350 34.9
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 4.5e-26 123.2 377 32.9
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.5e-26 123.2 421 30.6
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 7.7e-26 122.5 366 35.0
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.3e-25 121.7 378 33.3
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 1.7e-25 121.3 380 35.5
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 2.2e-25 120.9 305 35.7
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 2.9e-25 120.6 411 34.1
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 2.9e-25 120.6 411 34.1
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 5.0e-25 119.8 407 36.4
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 6.5e-25 119.4 412 33.7
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.4e-24 118.2 406 35.2
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 3.2e-24 117.1 368 38.6
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 3.2e-24 117.1 405 33.1
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 9.4e-24 115.5 414 33.3
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 1.6e-23 114.8 405 33.1
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 2.7e-23 114.0 390 33.1
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 2.7e-23 114.0 406 30.8
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 4.6e-23 113.2 407 30.7
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 1.4e-22 111.7 411 33.3
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 6.7e-22 109.4 359 35.7
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 2.0e-21 107.8 410 33.4
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 2.0e-21 107.8 400 33.2
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 5.7e-21 106.3 409 34.0
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 1.3e-20 105.1 414 32.4
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 1.7e-20 104.8 122 50.8
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 2.2e-20 104.4 294 33.0
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 2.8e-20 104.0 411 34.3
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 8.2e-20 102.4 115 52.2
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 1.1e-19 102.1 415 34.2
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.4e-19 101.7 420 36.0
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 4.1e-19 100.1 398 32.7
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 5.3e-19 99.8 286 34.6
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 5.3e-19 99.8 123 43.9
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 6.9e-19 99.4 372 30.1
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 1.5e-18 98.2 119 49.6
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.6e-18 97.4 411 31.6
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 3.4e-18 97.1 111 50.5
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 4.5e-18 96.7 414 35.0
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 1.0e-17 95.5 105 50.5
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 1.7e-17 94.7 300 37.3
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 1.7e-17 94.7 119 49.6
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 2.2e-17 94.4 127 43.3
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.8e-17 93.6 137 44.5
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 3.8e-17 93.6 318 36.8
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 6.5e-17 92.8 135 42.2
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 4.2e-16 90.1 99 49.5
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 1.6e-15 88.2 427 30.9
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 2.7e-15 87.4 464 28.2
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 8.2e-12 75.9 382 32.7
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 1.1e-11 75.5 256 30.9
Aqoxy1G04021 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.7e-09 68.2 77 50.6
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 5.0e-09 66.6 74 50.0
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 1.5e-08 65.1 116 39.7
Aqoxy7G02275 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.5e-08 65.1 75 49.3
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 5.5e-08 63.2 45 64.4
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 9.4e-08 62.4 48 58.3
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.2e-07 62.0 106 35.8
CAN.G162.97 Capsicum annuum HOM05D005773 ORTHO05D006930 3.6e-07 60.5 65 50.8
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 4.7e-07 60.1 150 36.0


User provided reference genes

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