Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g098467.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 4.6e-106 388.3 252 100.0
PGSC0003DMG400004658 Solanum tuberosum HOM05D003029 ORTHO05D003413 1.5e-96 356.7 255 91.8
Sopen12g033250 Solanum pennellii HOM05D003029 ORTHO05D003413 5.5e-83 311.6 233 92.3
CAN.G767.12 Capsicum annuum HOM05D003029 ORTHO05D003413 9.4e-75 284.3 255 80.4
Nitab4.5_0000676g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 3.4e-69 265.8 259 74.5
Nitab4.5_0000850g0180 Nicotiana tabacum HOM05D003029 ORTHO05D003413 2.3e-65 253.1 259 72.6
PGSC0003DMG400015747 Solanum tuberosum HOM05D003029 ORTHO05D003413 2.9e-44 183.0 271 59.4
Solyc05g053770.4 Solanum lycopersicum HOM05D003029 ORTHO05D003413 1.9e-43 180.3 271 57.6
Sopen05g032240 Solanum pennellii HOM05D003029 ORTHO05D003413 5.2e-41 172.2 271 58.3
CAN.G765.36 Capsicum annuum HOM05D003029 ORTHO05D003413 2.8e-39 166.4 255 63.1
Nitab4.5_0002260g0050 Nicotiana tabacum HOM05D003029 ORTHO05D003413 3.1e-38 162.9 291 54.3
Nitab4.5_0006920g0010 Nicotiana tabacum HOM05D003029 ORTHO05D003413 7.7e-37 158.3 277 57.8
Peaxi162Scf00423g00411 Petunia axillaris HOM05D003029 ORTHO05D003413 2.7e-29 133.3 314 46.5
Solyc12g098463.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 7.8e-29 131.7 65 100.0
CSS0049755 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 3.0e-20 103.2 253 45.1
Dinv27203 Davidia involucrata HOM05D003029 ORTHO05D003413 3.0e-20 103.2 248 45.2
MSTRG.9800 Avicennia marina HOM05D003029 ORTHO05D003413 7.5e-16 88.6 258 43.4
Actinidia21255 Actinidia chinensis HOM05D003029 ORTHO05D003413 6.4e-15 85.5 252 41.3
Actinidia11454 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.4e-14 84.3 256 39.1
Actinidia35843 Actinidia chinensis HOM05D003029 ORTHO05D003413 4.1e-14 82.8 235 46.4
Dinv38178 Davidia involucrata HOM05D003029 ORTHO05D003413 1.2e-13 81.3 260 41.5
Peaxi162Scf00664g00001 Petunia axillaris HOM05D003029 ORTHO05D003413 1.6e-13 80.9 147 38.8
MSTRG.4243 Avicennia marina HOM05D003029 ORTHO05D003413 4.6e-13 79.3 255 45.5
Prupe.1G164200 Prunus persica HOM05D003029 ORTHO05D003413 6.0e-13 79.0 253 41.9
TAR633G2732 Trochodendron aralioides HOM05D003029 ORTHO05D003413 1.0e-12 78.2 254 32.3
TAR362G1056 Trochodendron aralioides HOM05D003029 ORTHO05D003413 3.0e-12 76.6 251 41.0
GSVIVG01021020001 Vitis vinifera HOM05D003029 ORTHO05D003413 3.9e-12 76.3 254 43.3
Gorai.005G028200 Gossypium raimondii HOM05D003029 ORTHO05D003413 6.6e-12 75.5 273 44.3
Oeu049048.2 Olea europaea HOM05D003029 ORTHO05D003413 6.6e-12 75.5 257 44.7
TAR636G0249 Trochodendron aralioides HOM05D003029 ORTHO05D003413 8.6e-12 75.1 252 41.3
Dinv14526 Davidia involucrata HOM05D003029 ORTHO05D003413 1.5e-11 74.3 253 39.9
RcHm_v2.0_Chr4g0413691 Rosa chinensis HOM05D003029 ORTHO05D003413 3.3e-11 73.2 258 41.9
Duzib268G0331 Durio zibethinus HOM05D003029 ORTHO05D003413 5.6e-11 72.4 273 39.6
MELO3C020427.2 Cucumis melo HOM05D003029 ORTHO05D003413 1.2e-10 71.2 232 44.8
Gohir.D02G022800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 2.8e-10 70.1 273 42.9
Actinidia28994 Actinidia chinensis HOM05D003029 ORTHO05D003413 6.2e-10 68.9 262 40.1
Cfa014958 Carpinus fangiana HOM05D003029 ORTHO05D003413 6.2e-10 68.9 259 40.5
TAR365G0314 Trochodendron aralioides HOM05D003029 ORTHO05D003413 6.2e-10 68.9 125 36.0
Atru.chr4.1590 Acer truncatum HOM05D003029 ORTHO05D003413 4.0e-09 66.2 284 37.3
Gohir.A02G019500 Gossypium hirsutum HOM05D003029 ORTHO05D003413 4.0e-09 66.2 274 41.6
Atru.chr6.1447 Acer truncatum HOM05D003029 ORTHO05D003413 5.2e-09 65.9 251 41.4
MD04G1017100 Malus domestica HOM05D003029 ORTHO05D003413 6.8e-09 65.5 252 38.9
Sed0025519 Sechium edule HOM05D003029 ORTHO05D003413 8.9e-09 65.1 232 43.1
Duzib151G1197 Durio zibethinus HOM05D003029 ORTHO05D003413 1.2e-08 64.7 274 43.1
CANSAT78G1052 Cannabis sativa HOM05D003029 ORTHO05D003413 1.5e-08 64.3 259 41.3
CiPaw.01G117300 Carya illinoinensis HOM05D003029 ORTHO05D003413 1.5e-08 64.3 255 37.6
Lalb_Chr13g0294851 Lupinus albus HOM05D003029 ORTHO05D003413 1.5e-08 64.3 250 43.6
Duzib212G0885 Durio zibethinus HOM05D003029 ORTHO05D003413 3.4e-08 63.2 273 39.6
Potri.001G319500 Populus trichocarpa HOM05D003029 ORTHO05D003413 3.4e-08 63.2 290 39.0
ClCG06G007970 Citrullus lanatus HOM05D003029 ORTHO05D003413 4.4e-08 62.8 232 43.1
Prupe.8G196300 Prunus persica HOM05D003029 ORTHO05D003413 4.4e-08 62.8 253 34.8
Glyma.18G001900 Glycine max HOM05D003029 ORTHO05D003413 5.8e-08 62.4 269 36.1
Potri.017G058500 Populus trichocarpa HOM05D003029 ORTHO05D003413 5.8e-08 62.4 270 37.4
Thecc.04G195700 Theobroma cacao HOM05D003029 ORTHO05D003413 5.8e-08 62.4 272 39.3
Haze_03354 Corylus avellana HOM05D003029 ORTHO05D003413 9.9e-08 61.6 136 33.8
Sed0005118 Sechium edule HOM05D003029 ORTHO05D003413 9.9e-08 61.6 247 38.5
HanXRQChr01g0022171 Helianthus annuus HOM05D003029 ORTHO05D003413 2.2e-07 60.5 34 82.4
CsaV3_2G011760 Cucumis sativus L. HOM05D003029 ORTHO05D003413 2.9e-07 60.1 232 43.1
MD04G1017000 Malus domestica HOM05D003029 ORTHO05D003413 2.9e-07 60.1 256 39.8
SGA_v2.0_scaffold270G46323 Striga asiatica HOM05D003029 ORTHO05D003413 2.9e-07 60.1 209 51.2
Actinidia21254 Actinidia chinensis HOM05D003029 ORTHO05D003413 6.4e-07 58.9 109 35.8
Lalb_Chr07g0186821 Lupinus albus HOM05D003029 ORTHO05D003413 1.4e-06 57.8 265 40.8
Nn3g20072 Nelumbo nucifera HOM05D003029 ORTHO05D003413 1.4e-06 57.8 193 35.8
Aqoxy2G03937 Aquilegia oxysepala HOM05D003029 ORTHO05D003413 3.2e-06 56.6 238 41.2
Oeu056423.1 Olea europaea HOM05D003029 ORTHO05D003413 3.2e-06 56.6 147 37.4
Migut.G00757 Erythranthe guttata HOM05D003029 ORTHO05D003413 4.1e-06 56.2 232 48.7
FvH4_4g13340 Fragaria vesca HOM05D003029 ORTHO05D003413 4.1e-06 56.2 34 73.5
FAN12G1114 Fragaria x ananassa HOM05D003029 ORTHO05D003413 4.1e-06 56.2 34 73.5
CiPaw.14G040000 Carya illinoinensis HOM05D003029 ORTHO05D003413 5.4e-06 55.8 255 36.1
DCAR_004743 Daucus carota HOM05D003029 ORTHO05D003413 7.1e-06 55.5 30 76.7
HPP92_006969 Vanilla planifolia HOM05D003029 ORTHO05D003413 7.1e-06 55.5 34 76.5
Nitab4.5_0006920g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 9.2e-06 55.1 171 50.9
Rhsim02G0061600 Rhododendron simsii HOM05D003029 ORTHO05D003413 9.2e-06 55.1 168 28.0


User provided reference genes

Program Settings