Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 2.2e-268 928.3 446 100.0
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 2.0e-266 921.8 446 99.3
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 2.5e-248 861.7 447 93.5
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 4.7e-247 857.4 444 92.8
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.4e-245 851.3 454 90.7
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 8.4e-244 846.7 463 89.2
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 3.2e-235 818.1 451 87.6
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 2.3e-201 705.7 446 76.2
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 1.7e-199 699.5 444 75.5
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 5.3e-198 694.5 440 75.0
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 9.1e-198 693.7 454 73.3
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 3.4e-197 691.8 439 75.9
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 3.4e-197 691.8 442 75.1
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 7.7e-197 690.6 438 74.9
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 2.9e-196 688.7 442 75.3
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 3.8e-196 688.3 445 73.7
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 5.5e-195 684.5 440 73.9
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 5.5e-195 684.5 424 75.9
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 7.2e-195 684.1 450 72.4
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 9.4e-195 683.7 444 74.3
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 1.6e-194 682.9 439 75.4
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 3.6e-194 681.8 438 74.7
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 1.4e-193 679.9 446 73.3
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 3.0e-193 678.7 421 75.5
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 3.9e-193 678.3 430 74.9
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 3.9e-193 678.3 421 75.5
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 5.1e-193 677.9 433 73.2
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 6.7e-193 677.6 430 74.9
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 1.5e-192 676.4 446 72.2
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 2.6e-192 675.6 447 74.3
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 4.4e-192 674.9 423 75.4
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 4.4e-192 674.9 456 72.4
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 5.7e-192 674.5 438 73.3
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 9.7e-192 673.7 450 72.9
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 9.7e-192 673.7 450 72.9
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 1.3e-191 673.3 446 73.1
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 1.7e-191 672.9 445 72.4
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 4.8e-191 671.4 433 73.0
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 6.3e-191 671.0 447 73.4
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 6.3e-191 671.0 421 75.8
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 8.2e-191 670.6 423 75.7
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 1.1e-190 670.2 445 71.2
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 9.1e-190 667.2 450 72.7
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 2.0e-189 666.0 421 75.8
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 2.0e-189 666.0 421 75.5
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 3.5e-189 665.2 419 75.9
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 4.5e-189 664.8 421 75.3
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 5.9e-189 664.5 421 75.8
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 7.7e-189 664.1 423 73.8
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 3.8e-188 661.8 452 72.3
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 3.8e-188 661.8 422 75.6
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 3.2e-187 658.7 420 75.2
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 4.2e-187 658.3 443 70.9
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 7.2e-187 657.5 423 73.3
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 1.4e-185 653.3 474 69.6
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.5e-184 649.8 446 70.6
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 4.8e-183 644.8 424 72.6
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 7.7e-181 637.5 589 58.4
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 1.3e-180 636.7 509 64.0
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 1.8e-177 626.3 558 60.0
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 2.4e-174 615.9 392 75.0
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 9.1e-174 614.0 428 69.4
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 2.5e-171 605.9 421 70.3
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 7.2e-171 604.4 371 76.8
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 2.7e-170 602.4 423 68.1
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.4e-168 595.5 446 68.2
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 4.4e-168 595.1 364 77.5
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 8.3e-167 590.9 410 70.7
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 1.1e-166 590.5 419 66.6
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.8e-166 589.7 364 76.4
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 4.1e-166 588.6 378 74.9
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 2.9e-164 582.4 380 72.4
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.8e-164 582.0 444 66.2
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 5.0e-164 581.6 409 67.2
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 1.2e-154 550.4 388 69.8
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 4.9e-151 538.5 365 72.9
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 1.5e-147 526.9 362 69.1
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 1.9e-147 526.6 341 75.1
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 9.5e-147 524.2 391 65.7
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 8.0e-146 521.2 373 69.2
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.3e-145 519.6 381 66.4
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 4.4e-144 515.4 353 71.1
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 2.4e-142 509.6 320 76.2
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 3.6e-138 495.7 425 60.7
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.9e-126 456.8 390 59.7
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 2.5e-123 446.4 285 75.4
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 6.4e-119 431.8 410 51.7
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 5.4e-118 428.7 406 52.5
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 2.8e-114 416.4 403 50.1
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 1.5e-112 410.6 406 49.5
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 4.9e-111 405.6 315 63.2
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 5.7e-99 365.5 234 72.6
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 3.3e-91 339.7 220 70.5
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 5.1e-84 315.8 230 66.1
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 1.3e-79 301.2 208 72.1
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 2.2e-63 247.3 430 36.5
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.1e-62 245.0 200 65.0
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 4.7e-61 239.6 409 35.5
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 3.0e-60 236.9 137 78.1
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.5e-54 218.0 130 81.5
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 1.2e-48 198.4 225 51.1
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 5.2e-44 183.0 408 29.2
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 1.1e-41 175.3 428 30.1
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 9.2e-41 172.2 177 48.0
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 5.2e-36 156.4 125 62.4
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.9e-33 147.9 89 78.7
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 5.4e-33 146.4 89 75.3
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 7.3e-30 136.0 114 57.9
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 7.5e-27 125.9 124 50.8
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 6.6e-23 112.8 72 75.0
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 6.2e-21 106.3 84 65.5
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 6.8e-20 102.8 65 75.4
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 1.0e-15 89.0 72 58.3
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 1.0e-15 89.0 97 46.4
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.7e-15 88.2 45 86.7
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 4.2e-09 67.0 33 78.8
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.1e-08 64.7 62 48.4
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 1.1e-06 58.9 37 75.7
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 1.1e-06 58.9 37 75.7
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 4.3e-06 57.0 35 74.3
C01p38650 Brassica napus HOM05D000595 ORTHO05D008454 5.6e-06 56.6 36 77.8


User provided reference genes

Program Settings