Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g094570.1 Solanum lycopersicum HOM05D004614 ORTHO05D005339 5.4e-100 367.9 210 100.0
Sopen12g031480 Solanum pennellii HOM05D004614 ORTHO05D005339 1.3e-93 346.7 197 100.0
Peaxi162Scf00064g01132 Petunia axillaris HOM05D004614 ORTHO05D005339 1.9e-81 306.2 195 87.2
Carub.0001s3422 Capsella rubella HOM05D004614 ORTHO05D005339 3.3e-81 305.4 196 85.2
AL1G51310 Arabidopsis lyrata HOM05D004614 ORTHO05D005339 5.6e-81 304.7 194 86.1
AT1G42430 Arabidopsis thaliana HOM05D004614 ORTHO05D005339 9.5e-81 303.9 194 86.1
Cc10_g00730 Coffea canephora HOM05D004614 ORTHO05D005339 9.5e-81 303.9 196 87.8
Hma1.2p1_0507F.1_g168400 Hydrangea macrophylla HOM05D004614 ORTHO05D005339 1.2e-80 303.5 194 87.6
THA.LOC104813167 Tarenaya hassleriana HOM05D004614 ORTHO05D005339 2.1e-80 302.8 193 87.0
BcaB04g17805 Brassica carinata HOM05D004614 ORTHO05D005339 2.8e-80 302.4 193 86.0
BcaC07g37479 Brassica carinata HOM05D004614 ORTHO05D005339 2.8e-80 302.4 193 86.0
A08p07800 Brassica napus HOM05D004614 ORTHO05D005339 2.8e-80 302.4 193 86.0
C08p09450 Brassica napus HOM05D004614 ORTHO05D005339 2.8e-80 302.4 193 86.0
BolC8t47801H Brassica oleracea HOM05D004614 ORTHO05D005339 2.8e-80 302.4 193 86.0
BraA08t32800Z Brassica rapa HOM05D004614 ORTHO05D005339 2.8e-80 302.4 193 86.0
DCAR_016768 Daucus carota HOM05D004614 ORTHO05D005339 2.8e-80 302.4 194 87.6
Sp1g32010 Schrenkiella parvula HOM05D004614 ORTHO05D005339 2.8e-80 302.4 193 86.0
TWI56G0787 Tripterygium wilfordii HOM05D004614 ORTHO05D005339 2.8e-80 302.4 195 87.2
Migut.C00954 Erythranthe guttata HOM05D004614 ORTHO05D005339 3.6e-80 302.0 198 84.8
PGSC0003DMG400029318 Solanum tuberosum HOM05D004614 ORTHO05D005339 3.6e-80 302.0 197 90.9
Cfa014064 Carpinus fangiana HOM05D004614 ORTHO05D005339 1.4e-79 300.1 185 89.7
Duzib093G0152 Durio zibethinus HOM05D004614 ORTHO05D005339 3.1e-79 298.9 193 87.6
Sed0024410 Sechium edule HOM05D004614 ORTHO05D005339 6.8e-79 297.7 194 85.1
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 1.2e-78 297.0 197 84.3
Thhalv10004272m.g Eutrema salsugineum HOM05D004614 ORTHO05D005339 5.8e-78 294.7 193 84.5
Lj1g0005022 Lotus japonicus HOM05D004614 ORTHO05D005339 7.5e-78 294.3 194 82.5
Ca_15438_v3 Cicer arietinum L. HOM05D004614 ORTHO05D005339 3.7e-77 292.0 196 85.7
QL02p013984 Quercus lobata HOM05D004614 ORTHO05D005339 3.7e-77 292.0 194 84.5
Aqoxy6G01739 Aquilegia oxysepala HOM05D004614 ORTHO05D005339 4.9e-77 291.6 194 83.0
VMungo1309G2703 Vigna mungo HOM05D004614 ORTHO05D005339 8.3e-77 290.8 193 86.5
TPR.G38127 Trifolium pratense HOM05D004614 ORTHO05D005339 2.4e-76 289.3 195 86.2
Glyma.04G018400 Glycine max HOM05D004614 ORTHO05D005339 3.2e-76 288.9 195 85.6
MELO3C026543.2 Cucumis melo HOM05D004614 ORTHO05D005339 4.1e-76 288.5 205 79.5
Glyma.06G018700 Glycine max HOM05D004614 ORTHO05D005339 4.1e-76 288.5 192 87.0
Phvul.009G010200 Phaseolus vulgaris HOM05D004614 ORTHO05D005339 5.4e-76 288.1 195 85.6
Aa31LG8G13830 Aethionema arabicum HOM05D004614 ORTHO05D005339 9.2e-76 287.3 185 84.9
Psat5g011520 Pisum sativum HOM05D004614 ORTHO05D005339 1.2e-75 287.0 196 85.2
Nn5g30931 Nelumbo nucifera HOM05D004614 ORTHO05D005339 7.8e-75 284.3 191 83.2
TAR376G0430 Trochodendron aralioides HOM05D004614 ORTHO05D005339 1.3e-74 283.5 192 81.2
unitig_82.g27116 Utricularia gibba HOM05D004614 ORTHO05D005339 1.3e-74 283.5 194 80.9
Potri.002G011300 Populus trichocarpa HOM05D004614 ORTHO05D005339 3.0e-74 282.3 188 84.0
Medtr3g115210 Medicago truncatula HOM05D004614 ORTHO05D005339 5.1e-74 281.6 194 85.1
Lj4A805T24 Lonicera japonica HOM05D004614 ORTHO05D005339 1.9e-73 279.6 194 83.0
Lalb_Chr11g0061661 Lupinus albus HOM05D004614 ORTHO05D005339 1.9e-73 279.6 187 86.6
Sc15g0004500 Simmondsia chinensis HOM05D004614 ORTHO05D005339 2.1e-72 276.2 193 81.9
PGR031G0851 Punica granatum HOM05D004614 ORTHO05D005339 2.8e-72 275.8 194 84.0
Prupe.1G354900 Prunus persica HOM05D004614 ORTHO05D005339 8.1e-72 274.2 193 83.4
CSS0048285 Camellia sinensis var. sinensis HOM05D004614 ORTHO05D005339 1.4e-71 273.5 194 83.0
TAR625G0334 Trochodendron aralioides HOM05D004614 ORTHO05D005339 1.8e-71 273.1 194 81.4
Thecc.08G058000 Theobroma cacao HOM05D004614 ORTHO05D005339 3.1e-71 272.3 193 82.9
CAN.G311.111 Capsicum annuum HOM05D004614 ORTHO05D005339 4.0e-71 271.9 195 83.1
CsaV3_6G031620 Cucumis sativus L. HOM05D004614 ORTHO05D005339 6.8e-71 271.2 194 82.0
Peaxi162Scf00893g00434 Petunia axillaris HOM05D004614 ORTHO05D005339 6.8e-71 271.2 195 82.1
Ciclev10001231m.g Citrus clementina HOM05D004614 ORTHO05D005339 1.5e-70 270.0 193 82.4
MD08G1002900 Malus domestica HOM05D004614 ORTHO05D005339 1.5e-70 270.0 193 82.9
PGSC0003DMG400009975 Solanum tuberosum HOM05D004614 ORTHO05D005339 2.0e-70 269.6 195 81.0
CANSAT25G1550 Cannabis sativa HOM05D004614 ORTHO05D005339 2.6e-70 269.2 195 82.1
MD15G1002600 Malus domestica HOM05D004614 ORTHO05D005339 3.4e-70 268.9 193 82.9
SGA_v2.0_scaffold275G46591 Striga asiatica HOM05D004614 ORTHO05D005339 3.4e-70 268.9 193 81.9
Ah.00g000370 Amaranthus hybridus HOM05D004614 ORTHO05D005339 7.5e-70 267.7 193 82.4
Solyc04g082290.4 Solanum lycopersicum HOM05D004614 ORTHO05D005339 7.5e-70 267.7 195 80.5
Sopen04g035910 Solanum pennellii HOM05D004614 ORTHO05D005339 7.5e-70 267.7 195 80.5
Actinidia29786 Actinidia chinensis HOM05D004614 ORTHO05D005339 9.9e-70 267.3 194 81.4
vmacro04401 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 9.9e-70 267.3 193 81.9
Manes.05G134900 Manihot esculenta HOM05D004614 ORTHO05D005339 1.7e-69 266.5 185 84.3
RcHm_v2.0_Chr6g0304201 Rosa chinensis HOM05D004614 ORTHO05D005339 2.2e-69 266.2 187 82.9
TWI36G0356 Tripterygium wilfordii HOM05D004614 ORTHO05D005339 2.9e-69 265.8 195 80.5
Eucgr.F03550 Eucalyptus grandis HOM05D004614 ORTHO05D005339 8.3e-69 264.2 196 80.6
ECA232G3530 Erigeron canadensis HOM05D004614 ORTHO05D005339 3.2e-68 262.3 194 82.0
Nn6g31744 Nelumbo nucifera HOM05D004614 ORTHO05D005339 4.1e-68 261.9 194 81.4
Dinv25909 Davidia involucrata HOM05D004614 ORTHO05D005339 2.3e-66 256.1 203 75.9
FAN15G3067 Fragaria x ananassa HOM05D004614 ORTHO05D005339 2.3e-66 256.1 182 83.0
FAN20G3039 Fragaria x ananassa HOM05D004614 ORTHO05D005339 2.3e-66 256.1 182 83.0
FAN27G1062 Fragaria x ananassa HOM05D004614 ORTHO05D005339 2.3e-66 256.1 182 83.0
AUR62036884 Chenopodium quinoa HOM05D004614 ORTHO05D005339 3.0e-66 255.8 201 71.1
COL.COLO4_04001 Corchorus olitorius HOM05D004614 ORTHO05D005339 3.9e-66 255.4 194 80.9
FvH4_2g37530 Fragaria vesca HOM05D004614 ORTHO05D005339 3.9e-66 255.4 199 77.9
Gohir.A01G106500 Gossypium hirsutum HOM05D004614 ORTHO05D005339 5.1e-66 255.0 191 74.3
Lsat_1_v5_gn_9_45021 Lactuca sativa HOM05D004614 ORTHO05D005339 5.1e-66 255.0 202 78.2
HPP92_020707 Vanilla planifolia HOM05D004614 ORTHO05D005339 5.1e-66 255.0 200 69.5
CiPaw.08G072400 Carya illinoinensis HOM05D004614 ORTHO05D005339 6.6e-66 254.6 200 77.0
Duzib116G0199 Durio zibethinus HOM05D004614 ORTHO05D005339 4.3e-65 251.9 193 79.3
Hund01763 Selenicereus undatus HOM05D004614 ORTHO05D005339 1.6e-64 250.0 195 77.4
Mapoly0189s0007 Marchantia polymorpha HOM05D004614 ORTHO05D005339 4.7e-64 248.4 183 77.6
GSVIVG01008677001 Vitis vinifera HOM05D004614 ORTHO05D005339 8.1e-64 247.7 185 82.2
Cpa.g.sc26.206 Carica papaya HOM05D004614 ORTHO05D005339 1.4e-63 246.9 194 77.8
CDE02G2145 Ceratophyllum demersum HOM05D004614 ORTHO05D005339 1.2e-62 243.8 173 84.4
Actinidia37970 Actinidia chinensis HOM05D004614 ORTHO05D005339 2.6e-62 242.7 194 77.8
Sabra05G0193200 Salix brachista HOM05D004614 ORTHO05D005339 7.6e-62 241.1 194 77.8
Potri.005G249700 Populus trichocarpa HOM05D004614 ORTHO05D005339 9.9e-62 240.7 194 77.3
Pp3c7_400 Physcomitrium patens HOM05D004614 ORTHO05D005339 1.3e-61 240.4 184 71.2
CiPaw.07G139400 Carya illinoinensis HOM05D004614 ORTHO05D005339 1.7e-61 240.0 185 80.0
Oeu056211.1 Olea europaea HOM05D004614 ORTHO05D005339 2.9e-61 239.2 173 80.9
HanXRQChr14g0428261 Helianthus annuus HOM05D004614 ORTHO05D005339 4.9e-61 238.4 196 75.0
Os03g0133300 Oryza sativa ssp. japonica HOM05D004614 ORTHO05D005339 1.9e-60 236.5 195 75.9
HanXRQChr05g0146811 Helianthus annuus HOM05D004614 ORTHO05D005339 2.4e-60 236.1 195 76.4
SMO169G0316 Selaginella moellendorffii HOM05D004614 ORTHO05D005339 2.4e-60 236.1 186 72.0
Duzib041G0192 Durio zibethinus HOM05D004614 ORTHO05D005339 4.6e-59 231.9 193 75.6
Rhsim07G0254700 Rhododendron simsii HOM05D004614 ORTHO05D005339 6.0e-59 231.5 190 74.2
Gohir.A05G179800 Gossypium hirsutum HOM05D004614 ORTHO05D005339 6.6e-58 228.0 198 73.7
Gorai.009G188200 Gossypium raimondii HOM05D004614 ORTHO05D005339 6.6e-58 228.0 198 73.7
Rhsim06G0008000 Rhododendron simsii HOM05D004614 ORTHO05D005339 3.3e-57 225.7 197 72.6
Pp3c11_25930 Physcomitrium patens HOM05D004614 ORTHO05D005339 8.1e-56 221.1 184 67.9
Lsat_1_v5_gn_2_6461 Lactuca sativa HOM05D004614 ORTHO05D005339 5.8e-54 214.9 196 71.4
HanXRQChr15g0492731 Helianthus annuus HOM05D004614 ORTHO05D005339 1.1e-52 210.7 147 86.4
unitig_748.g7709 Utricularia gibba HOM05D004614 ORTHO05D005339 5.4e-52 208.4 184 71.2
CARHR292380 Cardamine hirsuta HOM05D004614 ORTHO05D005339 2.1e-51 206.5 121 76.9
PSO541G0908 Papaver somniferum HOM05D004614 ORTHO05D005339 1.0e-50 204.1 206 64.1
PSO675G0524 Papaver somniferum HOM05D004614 ORTHO05D005339 1.0e-50 204.1 206 64.1
ATR0661G410 Amborella trichopoda HOM05D004614 ORTHO05D005339 3.9e-50 202.2 199 67.3
Gorai.002G118400 Gossypium raimondii HOM05D004614 ORTHO05D005339 1.9e-49 199.9 191 68.1
Gohir.D01G093000 Gossypium hirsutum HOM05D004614 ORTHO05D005339 2.8e-48 196.1 191 67.0
SEGI_03937 Sequoiadendron giganteum HOM05D004614 ORTHO05D005339 2.4e-47 193.0 195 66.7
Nitab4.5_0000699g0050 Nicotiana tabacum HOM05D004614 ORTHO05D005339 5.3e-47 191.8 185 65.4
Nitab4.5_0010763g0030 Nicotiana tabacum HOM05D004614 ORTHO05D005339 1.2e-46 190.7 239 54.0
Manes.18G005900 Manihot esculenta HOM05D004614 ORTHO05D005339 6.4e-45 184.9 147 82.3
MD07G1011800 Malus domestica HOM05D004614 ORTHO05D005339 4.6e-43 178.7 152 76.3
EL10Ac1g01976 Beta vulgaris HOM05D004614 ORTHO05D005339 6.0e-43 178.3 107 76.6
Dinv31932 Davidia involucrata HOM05D004614 ORTHO05D005339 3.3e-41 172.6 121 89.3
ClCG08G009480 Citrullus lanatus HOM05D004614 ORTHO05D005339 4.5e-38 162.2 85 84.7
ClCG08G009540 Citrullus lanatus HOM05D004614 ORTHO05D005339 1.7e-37 160.2 133 77.4
arahy.Tifrunner.gnm1.ann1.7DZ9XI Arachis hypogaea HOM05D004614 ORTHO05D005339 3.5e-35 152.5 192 60.4
arahy.Tifrunner.gnm1.ann1.MYP9FH Arachis hypogaea HOM05D004614 ORTHO05D005339 4.6e-35 152.1 203 57.6
AUR62043351 Chenopodium quinoa HOM05D004614 ORTHO05D005339 2.3e-34 149.8 135 65.2
TAR381G0464 Trochodendron aralioides HOM05D004614 ORTHO05D005339 3.0e-34 149.4 147 73.5
Atru.chr13.150 Acer truncatum HOM05D004614 ORTHO05D005339 2.8e-32 142.9 111 84.7
Gohir.D05G182900 Gossypium hirsutum HOM05D004614 ORTHO05D005339 4.1e-31 139.0 109 82.6
Nitab4.5_0000588g0160 Nicotiana tabacum HOM05D004614 ORTHO05D005339 1.5e-30 137.1 194 49.0
MD11G1103700 Malus domestica HOM05D004614 ORTHO05D005339 9.3e-28 127.9 70 82.9
Lj4A12T78 Lonicera japonica HOM05D004614 ORTHO05D005339 6.1e-27 125.2 63 85.7
Phvul.L001638 Phaseolus vulgaris HOM05D004614 ORTHO05D005339 2.2e-24 116.7 62 83.9
PGSC0003DMG400033656 Solanum tuberosum HOM05D004614 ORTHO05D005339 4.1e-23 112.5 58 93.1
Lj4A12T77 Lonicera japonica HOM05D004614 ORTHO05D005339 9.0e-23 111.3 111 78.4
CARHR292370 Cardamine hirsuta HOM05D004614 ORTHO05D005339 5.5e-20 102.1 67 95.5
Haze_22759 Corylus avellana HOM05D004614 ORTHO05D005339 5.5e-20 102.1 67 95.5
Zm00001eb002680 Zea mays HOM05D004614 ORTHO05D005339 1.8e-18 97.1 50 92.0
CSS0047318 Camellia sinensis var. sinensis HOM05D004614 ORTHO05D005339 6.7e-18 95.1 67 73.1
Peaxi162Scf00447g00052 Petunia axillaris HOM05D004614 ORTHO05D005339 2.0e-17 93.6 101 52.5
CBR_g19275 Chara braunii HOM05D006445 ORTHO05D008030 2.8e-16 89.7 78 47.4
EL10Ac1g01977 Beta vulgaris HOM05D004614 ORTHO05D005339 1.1e-15 87.8 67 70.1
Cre05.g248000 Chlamydomonas reinhardtii HOM05D004614 ORTHO05D005339 5.3e-15 85.5 177 45.2
TAR549G0008 Trochodendron aralioides HOM05D006445 ORTHO05D008030 1.1e-12 77.8 159 45.9
TAR633G2087 Trochodendron aralioides HOM05D006445 ORTHO05D008030 1.1e-12 77.8 159 45.9
Ciclev10004554m.g Citrus clementina HOM05D006445 ORTHO05D008030 3.2e-12 76.3 75 46.7
Hund05117 Selenicereus undatus HOM05D004614 ORTHO05D005339 1.4e-10 70.9 48 66.7
Cc03_g04450 Coffea canephora HOM05D006445 ORTHO05D008030 6.7e-10 68.6 180 43.3
Os11g0586300 Oryza sativa ssp. japonica HOM05D006445 ORTHO05D008030 3.3e-09 66.2 71 45.1
SMO202G0022 Selaginella moellendorffii HOM05D004614 ORTHO05D005339 5.7e-09 65.5 121 47.1
Zm00001eb200610 Zea mays HOM05D006445 ORTHO05D008030 3.7e-08 62.8 83 37.3
Nitab4.5_0006949g0050 Nicotiana tabacum HOM05D004614 ORTHO05D005339 8.2e-08 61.6 32 81.2
MCO11G687 Micromonas commoda HOM05D004614 ORTHO05D005339 1.1e-07 61.2 81 40.7
PGR031G1697 Punica granatum HOM05D004614 ORTHO05D005339 1.4e-07 60.8 70 78.6
CiPaw.01G193800 Carya illinoinensis HOM05D006445 ORTHO05D008030 1.2e-06 57.8 37 64.9
Mapoly0053s0066 Marchantia polymorpha HOM05D006445 ORTHO05D008030 4.5e-06 55.8 68 35.3
CSS0044612 Camellia sinensis var. sinensis HOM05D004614 ORTHO05D005339 7.7e-06 55.1 28 85.7


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