Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g070156.2 Solanum lycopersicum HOM05D001883 ORTHO05D030625 1.1e-57 226.5 115 100.0
PGSC0003DMG400004416 Solanum tuberosum HOM05D006353 ORTHO05D007993 4.3e-27 124.8 75 90.7
Solyc11g065410.1 Solanum lycopersicum HOM05D055009 ORTHO05D030625 6.3e-18 94.4 101 54.5
Nitab4.5_0002550g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.1e-17 92.0 112 42.9
Nitab4.5_0001232g0080 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.5e-16 89.7 112 42.0
Nitab4.5_0000036g0280 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.0e-16 89.4 112 42.0
Nitab4.5_0000165g0070 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.9e-16 87.8 112 44.6
Nitab4.5_0001238g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.3e-15 86.7 111 37.8
Nitab4.5_0001652g0110 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.2e-15 85.9 112 39.3
Nitab4.5_0001478g0090 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.9e-15 85.5 112 39.3
Nitab4.5_0003769g0140 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.9e-15 85.5 112 42.0
Nitab4.5_0001487g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.8e-15 85.1 105 43.8
Nitab4.5_0005577g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.1e-14 83.6 109 40.4
Nitab4.5_0000517g0120 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.9e-14 82.8 111 40.5
Nitab4.5_0007410g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.2e-14 80.9 112 38.4
Solyc10g050460.1 Solanum lycopersicum HOM05D006353 ORTHO05D030625 9.4e-14 80.5 48 89.6
Nitab4.5_0003815g0120 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.2e-13 80.1 107 40.2
Nitab4.5_0000590g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.6e-13 78.6 107 42.1
Nitab4.5_0002260g0100 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.3e-12 75.9 99 40.4
Solyc02g030317.1 Solanum lycopersicum HOM05D055009 ORTHO05D030625 8.8e-12 73.9 87 51.7
Nitab4.5_0007534g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.5e-11 72.4 111 35.1
Nitab4.5_0009424g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.3e-11 71.6 111 37.8
Nitab4.5_0003397g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.4e-11 70.9 112 35.7
Nitab4.5_0003178g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.3e-10 70.1 111 38.7
Peaxi162Scf00780g00416 Petunia axillaris HOM05D001883 ORTHO05D002184 1.7e-10 69.7 98 39.8
Nitab4.5_0009994g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.2e-10 69.3 85 43.5
Nitab4.5_0001413g0080 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.8e-10 68.2 92 42.4
Nitab4.5_0002454g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.1e-09 67.0 116 35.3
Nitab4.5_0005376g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.4e-09 66.6 109 36.7
Peaxi162Scf00805g00517 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-09 66.6 106 33.0
Nitab4.5_0003200g0070 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.8e-09 66.2 114 36.0
Nitab4.5_0000153g0120 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.4e-09 65.9 111 35.1
Nitab4.5_0007546g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.1e-09 65.5 112 33.0
Peaxi162Scf00229g01011 Petunia axillaris HOM05D001883 ORTHO05D002184 3.1e-09 65.5 91 40.7
Peaxi162Scf00538g00714 Petunia axillaris HOM05D001883 ORTHO05D002184 3.1e-09 65.5 91 39.6
Nitab4.5_0000697g0220 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.9e-09 64.3 111 30.6
Nitab4.5_0006600g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.9e-09 64.3 111 35.1
Nitab4.5_0008193g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.1e-09 63.9 112 34.8
Nitab4.5_0001004g0140 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.2e-08 63.5 84 41.7
Nitab4.5_0002304g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.2e-08 63.5 111 36.0
Nitab4.5_0008822g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.0e-08 62.8 111 28.8
Nitab4.5_0003982g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.6e-08 62.4 106 36.8
Nitab4.5_0007686g0050 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.4e-08 62.0 129 28.7
Nitab4.5_0000178g0180 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.5e-08 61.6 111 35.1
Peaxi162Scf00193g00720 Petunia axillaris HOM05D001883 ORTHO05D002184 4.5e-08 61.6 111 34.2
Peaxi162Scf00793g00320 Petunia axillaris HOM05D001883 ORTHO05D002184 4.5e-08 61.6 106 34.9
Peaxi162Scf00322g00085 Petunia axillaris HOM05D001883 ORTHO05D002184 5.9e-08 61.2 106 31.1
Nitab4.5_0002500g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.7e-08 60.8 110 34.5
Peaxi162Scf00128g00098 Petunia axillaris HOM05D001883 ORTHO05D002184 7.7e-08 60.8 103 35.0
Peaxi162Scf11505g00003 Petunia axillaris HOM05D001883 ORTHO05D002184 7.7e-08 60.8 103 35.0
Nitab4.5_0011837g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.0e-07 60.5 81 40.7
Nitab4.5_0026814g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.3e-07 60.1 84 38.1
Peaxi162Scf00003g00007 Petunia axillaris HOM05D001883 ORTHO05D002184 1.3e-07 60.1 106 32.1
Peaxi162Scf00023g02224 Petunia axillaris HOM05D001883 ORTHO05D002184 1.3e-07 60.1 108 34.3
Peaxi162Scf00429g00715 Petunia axillaris HOM05D001883 ORTHO05D002184 1.7e-07 59.7 92 42.4
Peaxi162Scf00916g00123 Petunia axillaris HOM05D001883 ORTHO05D002184 1.7e-07 59.7 106 31.1
Nitab4.5_0005277g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.9e-07 58.9 111 34.2
Peaxi162Scf00005g04013 Petunia axillaris HOM05D001883 ORTHO05D002184 3.8e-07 58.5 106 30.2
Peaxi162Scf00034g00158 Petunia axillaris HOM05D001883 ORTHO05D002184 3.8e-07 58.5 106 30.2
Peaxi162Scf00088g01022 Petunia axillaris HOM05D001883 ORTHO05D002184 3.8e-07 58.5 91 40.7
Peaxi162Scf00248g00115 Petunia axillaris HOM05D001883 ORTHO05D002184 3.8e-07 58.5 106 30.2
Peaxi162Scf00344g00410 Petunia axillaris HOM05D001883 ORTHO05D002184 3.8e-07 58.5 106 30.2
Peaxi162Scf00360g00012 Petunia axillaris HOM05D001883 ORTHO05D002184 3.8e-07 58.5 106 30.2
Peaxi162Scf00395g00014 Petunia axillaris HOM05D001883 ORTHO05D002184 3.8e-07 58.5 106 30.2
Peaxi162Scf00434g00729 Petunia axillaris HOM05D001883 ORTHO05D002184 3.8e-07 58.5 106 30.2
Peaxi162Scf00543g00417 Petunia axillaris HOM05D001883 ORTHO05D002184 3.8e-07 58.5 106 30.2
Peaxi162Scf00966g00117 Petunia axillaris HOM05D001883 ORTHO05D002184 3.8e-07 58.5 106 30.2
Peaxi162Scf03301g00014 Petunia axillaris HOM05D001883 ORTHO05D002184 3.8e-07 58.5 91 37.4
Nitab4.5_0011861g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.0e-07 58.2 112 32.1
Peaxi162Scf00303g01113 Petunia axillaris HOM05D001883 ORTHO05D002184 5.0e-07 58.2 91 40.7
Nitab4.5_0000271g0370 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.5e-07 57.8 106 34.9
Nitab4.5_0002380g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.5e-07 57.8 96 36.5
Peaxi162Scf00116g00813 Petunia axillaris HOM05D001883 ORTHO05D002184 6.5e-07 57.8 106 29.2
Nitab4.5_0000781g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.5e-07 57.4 100 34.0
Nitab4.5_0001931g0130 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.5e-07 57.4 132 28.0
Solyc12g014615.1 Solanum lycopersicum HOM05D000594 ORTHO05D010385 1.1e-06 57.0 31 80.6
Peaxi162Scf00040g00322 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Peaxi162Scf00069g01727 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Peaxi162Scf00087g00311 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Peaxi162Scf00178g00136 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Peaxi162Scf00221g00028 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 110 38.2
Peaxi162Scf00297g00214 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Peaxi162Scf00310g00821 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Peaxi162Scf00471g00711 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Peaxi162Scf00760g00122 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Peaxi162Scf00802g00123 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Peaxi162Scf00823g00011 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Peaxi162Scf00901g00213 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Peaxi162Scf01064g00116 Petunia axillaris HOM05D001883 ORTHO05D002184 1.4e-06 56.6 92 39.1
Nitab4.5_0001589g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.9e-06 56.2 112 35.7
Peaxi162Scf00057g02229 Petunia axillaris HOM05D001883 ORTHO05D002184 1.9e-06 56.2 110 36.4
Nitab4.5_0012297g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.2e-06 55.5 110 33.6
Nitab4.5_0002788g0070 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.2e-06 55.1 111 26.1
Peaxi162Scf00391g00422 Petunia axillaris HOM05D001883 ORTHO05D002184 4.2e-06 55.1 106 29.2
Nitab4.5_0007431g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.5e-06 54.7 126 30.2
Peaxi162Scf00330g00910 Petunia axillaris HOM05D001883 ORTHO05D002184 5.5e-06 54.7 106 30.2
Peaxi162Scf00500g00217 Petunia axillaris HOM05D001883 ORTHO05D002184 5.5e-06 54.7 106 29.2
Nitab4.5_0001031g0130 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.4e-06 53.9 111 32.4
Nitab4.5_0010701g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 9.4e-06 53.9 84 34.5


User provided reference genes

Program Settings