Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g062227.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 4.9e-128 461.5 291 100.0
Sopen05g011420 Solanum pennellii HOM05D003329 ORTHO05D006664 4.0e-53 212.6 393 48.6
Sopen10g024270 Solanum pennellii HOM05D003329 ORTHO05D006664 1.5e-44 184.1 397 39.5
PGSC0003DMG400002097 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.7e-33 146.7 108 75.9
Solyc04g050445.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 1.1e-31 141.4 307 40.1
CAN.G78.125 Capsicum annuum HOM05D003329 ORTHO05D006664 2.8e-30 136.7 378 43.7
Sopen12g026120 Solanum pennellii HOM05D000004 ORTHO05D006664 4.8e-30 136.0 143 56.6
Solyc07g150124.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 2.6e-28 130.2 98 75.5
PGSC0003DMG400036256 Solanum tuberosum HOM05D003329 ORTHO05D006664 7.6e-28 128.6 143 53.8
Sopen07g022750 Solanum pennellii HOM05D003329 ORTHO05D006664 1.1e-26 124.8 68 94.1
Sopen05g026950 Solanum pennellii HOM05D003329 ORTHO05D006664 9.3e-26 121.7 124 65.3
Sopen05g018130 Solanum pennellii HOM05D003329 ORTHO05D006664 1.2e-25 121.3 120 58.3
Solyc10g054410.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 6.0e-25 119.0 156 66.0
CAN.G208.4 Capsicum annuum HOM05D000201 ORTHO05D000490 3.4e-20 103.2 96 59.4
PGSC0003DMG400034400 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.7e-19 100.9 127 55.9
CAN.G264.22 Capsicum annuum HOM05D003329 ORTHO05D006664 1.1e-18 98.2 85 64.7
Nitab4.5_0008974g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-18 98.2 286 29.4
CAN.G26.44 Capsicum annuum HOM05D003329 ORTHO05D006664 1.4e-18 97.8 83 65.1
Sopen07g021890 Solanum pennellii HOM05D000004 ORTHO05D006664 1.4e-18 97.8 59 84.7
PGSC0003DMG400029715 Solanum tuberosum HOM05D003329 ORTHO05D006664 9.3e-18 95.1 95 57.9
PGSC0003DMG401006646 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.2e-17 94.7 67 71.6
PGSC0003DMG400017907 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.6e-17 94.4 95 56.8
PGSC0003DMG400022546 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.6e-17 94.4 95 56.8
PGSC0003DMG400036646 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.0e-16 91.7 94 56.4
Nitab4.5_0011168g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.3e-16 90.5 308 35.4
PGSC0003DMG400037742 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.3e-16 90.5 100 55.0
Nitab4.5_0002149g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.9e-16 89.7 231 41.6
Nitab4.5_0000417g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.7e-16 89.0 300 28.7
Nitab4.5_0000092g0290 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.7e-16 88.6 343 33.2
CAN.G229.35 Capsicum annuum HOM05D003329 ORTHO05D006664 1.1e-15 88.2 123 47.2
Nitab4.5_0002330g0170 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-15 88.2 280 32.9
Nitab4.5_0000381g0260 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.9e-15 87.4 291 29.9
Sopen07g013090 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-14 84.3 74 67.6
Nitab4.5_0000316g0080 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.8e-14 83.6 115 43.5
Nitab4.5_0000119g0270 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.7e-14 83.2 215 34.0
Nitab4.5_0003022g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-13 81.6 98 46.9
PGSC0003DMG400008529 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.1e-13 81.6 83 53.0
CAN.G1799.5 Capsicum annuum HOM05D003329 ORTHO05D006664 4.0e-13 79.7 109 47.7
Nitab4.5_0000565g0250 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.3e-13 79.3 345 30.7
Peaxi162Scf00765g00129 Petunia axillaris HOM05D003329 ORTHO05D006664 5.3e-13 79.3 257 37.0
CAN.G255.13 Capsicum annuum HOM05D003329 ORTHO05D006664 6.9e-13 79.0 78 59.0
PGSC0003DMG400045983 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.2e-12 78.2 54 74.1
Nitab4.5_0002918g0120 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-12 77.8 216 31.5
CAN.G1572.5 Capsicum annuum HOM05D003329 ORTHO05D006664 2.0e-12 77.4 71 59.2
CAN.G675.4 Capsicum annuum HOM05D000040 ORTHO05D009963 2.0e-12 77.4 72 62.5
CAN.G907.5 Capsicum annuum HOM05D003329 ORTHO05D006664 2.6e-12 77.0 113 47.8
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 5.8e-12 75.9 82 56.1
Nitab4.5_0000213g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.8e-12 75.9 94 46.8
Nitab4.5_0005964g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-11 74.7 280 27.1
Nitab4.5_0000653g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.2e-11 73.9 98 42.9
CAN.G3481.2 Capsicum annuum HOM05D003329 ORTHO05D006664 4.9e-11 72.8 63 61.9
Nitab4.5_0000141g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.9e-11 72.8 71 57.7
Nitab4.5_0001759g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.9e-11 72.8 371 33.7
Peaxi162Scf00237g01212 Petunia axillaris HOM05D003329 ORTHO05D006664 6.5e-11 72.4 234 36.3
PGSC0003DMG400037928 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.1e-10 71.6 112 42.0
CAN.G1273.35 Capsicum annuum HOM05D003329 ORTHO05D006664 1.9e-10 70.9 78 60.3
Nitab4.5_0016516g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.5e-10 70.5 62 59.7
CAN.G821.5 Capsicum annuum HOM05D003329 ORTHO05D006664 3.2e-10 70.1 108 39.8
PGSC0003DMG400034347 Solanum tuberosum HOM05D003329 ORTHO05D006664 3.2e-10 70.1 98 45.9
Nitab4.5_0008332g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.3e-10 68.6 59 57.6
Nitab4.5_0000128g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.2e-09 68.2 113 39.8
Nitab4.5_0000785g0110 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-09 67.8 95 44.2
Nitab4.5_0003484g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.1e-09 67.4 262 26.7
Nitab4.5_0000329g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.7e-09 67.0 62 56.5
Nitab4.5_0000682g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.6e-09 66.2 81 48.1
Peaxi162Scf00171g00215 Petunia axillaris HOM05D003329 ORTHO05D006664 4.6e-09 66.2 294 34.0
PGSC0003DMG400044748 Solanum tuberosum HOM05D003329 ORTHO05D006664 4.6e-09 66.2 47 70.2
Nitab4.5_0001653g0010 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.9e-09 65.5 83 45.8
CAN.G945.1 Capsicum annuum HOM05D002944 ORTHO05D003377 1.0e-08 65.1 55 65.5
Nitab4.5_0001817g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-08 64.7 112 37.5
Nitab4.5_0001573g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.3e-08 63.9 97 40.2
Peaxi162Scf00990g00006 Petunia axillaris HOM05D003329 ORTHO05D006664 3.0e-08 63.5 299 32.8
CAN.G65.137 Capsicum annuum HOM05D000017 ORTHO05D010801 5.1e-08 62.8 145 36.6
Nitab4.5_0001309g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.7e-08 62.4 54 53.7
Peaxi162Scf00021g00075 Petunia axillaris HOM05D003329 ORTHO05D006664 6.7e-08 62.4 243 35.8
Nitab4.5_0000965g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.7e-08 62.0 106 38.7
Peaxi162Scf00225g00104 Petunia axillaris HOM05D003329 ORTHO05D006664 8.7e-08 62.0 297 33.0
CAN.G178.9 Capsicum annuum HOM05D003329 ORTHO05D006664 2.5e-07 60.5 128 39.1
Nitab4.5_0000073g0200 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.5e-07 60.5 60 48.3
Nitab4.5_0022071g0010 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.3e-07 60.1 112 35.7
Nitab4.5_0000393g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.3e-07 59.7 82 42.7
Nitab4.5_0000901g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.3e-07 59.7 108 36.1
Nitab4.5_0001794g0070 Nicotiana tabacum HOM05D003329 ORTHO05D015718 2.1e-06 57.4 211 28.9
Nitab4.5_0005015g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.1e-06 57.4 92 40.2
CAN.G483.7 Capsicum annuum HOM05D003329 ORTHO05D006664 2.8e-06 57.0 36 69.4
Nitab4.5_0000529g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.8e-06 57.0 93 39.8
Nitab4.5_0009435g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.8e-06 57.0 111 35.1
Nitab4.5_0000073g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.7e-06 56.6 111 34.2
Nitab4.5_0000682g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.7e-06 56.6 112 34.8
Peaxi162Scf00025g02431 Petunia axillaris HOM05D003329 ORTHO05D006664 6.2e-06 55.8 82 43.9
Sopen08g005900 Solanum pennellii HOM05D003150 ORTHO05D003532 8.2e-06 55.5 37 75.7


User provided reference genes

Program Settings