Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g062160.1 Solanum lycopersicum HOM05D001111 ORTHO05D037656 9.1e-116 420.2 209 100.0
Sopen12g024590 Solanum pennellii HOM05D001111 ORTHO05D037656 6.5e-106 387.5 206 95.6
PGSC0003DMG400030091 Solanum tuberosum HOM05D001111 ORTHO05D000939 3.5e-67 258.8 223 66.8
PGSC0003DMG400030093 Solanum tuberosum HOM05D001111 ORTHO05D000939 3.9e-58 228.8 218 64.2
Solyc12g062220.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 8.4e-45 184.5 217 53.9
CAN.G464.41 Capsicum annuum HOM05D001111 ORTHO05D000939 1.9e-36 156.8 228 50.0
CAN.G464.40 Capsicum annuum HOM05D001111 ORTHO05D000939 2.7e-35 152.9 228 49.1
CAN.G4822.1 Capsicum annuum HOM05D001111 ORTHO05D000939 2.7e-35 152.9 228 49.1
Solyc12g062170.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 2.3e-34 149.8 108 75.0
Sopen12g024750 Solanum pennellii HOM05D001111 ORTHO05D037656 7.6e-30 134.8 129 58.1
Peaxi162Scf00700g00061 Petunia axillaris HOM05D001111 ORTHO05D000939 2.7e-27 126.3 211 46.9
Peaxi162Scf00700g00062 Petunia axillaris HOM05D001111 ORTHO05D000939 2.7e-27 126.3 211 47.4
Peaxi162Scf00700g00055 Petunia axillaris HOM05D001111 ORTHO05D000939 3.0e-26 122.9 211 46.0
Peaxi162Scf00700g00066 Petunia axillaris HOM05D001111 ORTHO05D000939 1.1e-25 120.9 213 45.5
Nitab4.5_0004348g0010 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.1e-24 116.7 227 43.6
Nitab4.5_0007208g0010 Nicotiana tabacum HOM05D001111 ORTHO05D000939 3.7e-24 115.9 225 44.0
Nitab4.5_0006281g0050 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.4e-23 113.2 237 38.0
PGSC0003DMG400000492 Solanum tuberosum HOM05D001111 ORTHO05D000939 4.5e-22 109.0 231 38.5
Sopen02g031580 Solanum pennellii HOM05D001111 ORTHO05D000939 1.9e-20 103.6 227 37.9
Dinv35071 Davidia involucrata HOM05D005823 ORTHO05D007536 2.5e-20 103.2 235 37.9
Solyc02g086810.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 2.5e-20 103.2 230 37.4
Dinv00507 Davidia involucrata HOM05D001111 ORTHO05D000939 3.2e-20 102.8 235 37.9
CAN.G206.25 Capsicum annuum HOM05D001111 ORTHO05D000939 6.0e-19 98.6 207 40.6
Oeu037699.1 Olea europaea HOM05D001111 ORTHO05D000939 5.1e-18 95.5 230 37.8
Lju41C35T12 Lonicera japonica HOM05D001111 ORTHO05D000939 1.5e-17 94.0 229 36.7
Actinidia35745 Actinidia chinensis HOM05D001111 ORTHO05D000939 1.9e-17 93.6 213 34.7
Peaxi162Scf00129g00116 Petunia axillaris HOM05D001111 ORTHO05D000939 2.5e-17 93.2 211 35.5
Oeu043052.2 Olea europaea HOM05D001111 ORTHO05D000939 3.3e-17 92.8 227 34.8
Dinv33484 Davidia involucrata HOM05D001111 ORTHO05D000939 1.6e-16 90.5 211 37.0
Oeu037698.1 Olea europaea HOM05D001111 ORTHO05D000939 1.6e-16 90.5 227 36.1
Migut.H00111 Erythranthe guttata HOM05D001111 ORTHO05D000939 2.8e-16 89.7 197 38.6
SalBow1G0495 Salvia bowleyana HOM05D001111 ORTHO05D000939 4.8e-16 89.0 209 35.9
Oeu048646.1 Olea europaea HOM05D001111 ORTHO05D000939 3.1e-15 86.3 227 36.1
SalBow7G3341 Salvia bowleyana HOM05D001111 ORTHO05D000939 2.0e-14 83.6 197 35.5
MSTRG.15514 Avicennia marina HOM05D001111 ORTHO05D000939 4.5e-14 82.4 235 34.0
MSTRG.24021 Avicennia marina HOM05D001111 ORTHO05D000939 5.8e-14 82.0 219 35.2
Cc07_g02140 Coffea canephora HOM05D001111 ORTHO05D000939 2.2e-13 80.1 254 31.1
SGA_v2.0_scaffold30G12462 Striga asiatica HOM05D001111 ORTHO05D000939 2.2e-13 80.1 198 31.3
MSTRG.3168 Avicennia marina HOM05D001111 ORTHO05D000939 9.3e-12 74.7 223 34.1
Lj6P806T43 Lonicera japonica HOM05D001111 ORTHO05D000939 2.1e-11 73.6 190 32.6
GSVIVG01032463001 Vitis vinifera HOM05D001111 ORTHO05D000939 2.1e-11 73.6 200 32.5
CSS0035264 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 2.7e-11 73.2 245 30.2
CSS0041696 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 2.7e-11 73.2 245 30.2
BolC6t39498H Brassica oleracea HOM05D001111 ORTHO05D000939 6.1e-11 72.0 172 37.8
DCAR_021689 Daucus carota HOM05D001111 ORTHO05D000939 6.1e-11 72.0 215 34.0
Atru.chr6.2310 Acer truncatum HOM05D001111 ORTHO05D000939 7.9e-11 71.6 206 33.5
Dinv24843 Davidia involucrata HOM05D001111 ORTHO05D000939 7.9e-11 71.6 157 35.7
Peaxi162Scf00017g00246 Petunia axillaris HOM05D000306 ORTHO05D016879 1.3e-10 70.9 179 40.8
TAR629G2362 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.3e-10 70.9 177 38.4
Manes.12G028200 Manihot esculenta HOM05D001111 ORTHO05D000939 3.0e-10 69.7 176 36.9
BcaB03g14801 Brassica carinata HOM05D001111 ORTHO05D000939 5.1e-10 68.9 159 37.1
C06p44280 Brassica napus HOM05D001111 ORTHO05D000939 5.1e-10 68.9 159 37.1
Manes.14G065800 Manihot esculenta HOM05D001111 ORTHO05D000939 6.7e-10 68.6 205 33.2
BcaC08g46484 Brassica carinata HOM05D001111 ORTHO05D000939 8.7e-10 68.2 160 37.5
TAR371G1086 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.1e-09 67.8 226 31.4
FAN17G1475 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.5e-09 67.4 200 31.0
Peaxi162Scf00710g00051 Petunia axillaris HOM05D001111 ORTHO05D000939 1.5e-09 67.4 116 42.2
Migut.K01372 Erythranthe guttata HOM05D001111 ORTHO05D000939 1.9e-09 67.0 237 28.3
PGR142G1453 Punica granatum HOM05D001111 ORTHO05D000939 1.9e-09 67.0 207 32.4
Aqoxy3G02945 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 2.5e-09 66.6 167 35.3
MD16G1093500 Malus domestica HOM05D001111 ORTHO05D000939 2.5e-09 66.6 192 32.8
Nitab4.5_0007719g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.5e-09 66.6 162 35.2
BraA07t31246Z Brassica rapa HOM05D001111 ORTHO05D000939 3.3e-09 66.2 156 36.5
Manes.06G104800 Manihot esculenta HOM05D001111 ORTHO05D000939 5.7e-09 65.5 182 34.6
A07p36790 Brassica napus HOM05D001111 ORTHO05D000939 7.4e-09 65.1 156 35.9
BcaC03g15182 Brassica carinata HOM05D001111 ORTHO05D000939 9.7e-09 64.7 181 32.6
Thhalv10018979m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 9.7e-09 64.7 160 37.5
Duzib251G0551 Durio zibethinus HOM05D001111 ORTHO05D000939 1.3e-08 64.3 172 35.5
Prupe.1G253100 Prunus persica HOM05D001111 ORTHO05D000939 1.3e-08 64.3 195 30.8
Sp5g25500 Schrenkiella parvula HOM05D001111 ORTHO05D000939 1.3e-08 64.3 222 32.9
Thecc.02G251000 Theobroma cacao HOM05D001111 ORTHO05D000939 1.3e-08 64.3 151 39.1
Lsat_1_v5_gn_0_14901 Lactuca sativa HOM05D001111 ORTHO05D000939 1.6e-08 63.9 189 35.4
Nn4g22768 Nelumbo nucifera HOM05D001111 ORTHO05D000939 1.6e-08 63.9 141 38.3
Solyc03g114350.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 1.6e-08 63.9 196 34.2
Dinv20655 Davidia involucrata HOM05D001111 ORTHO05D000939 2.2e-08 63.5 170 35.3
PGSC0003DMG400024504 Solanum tuberosum HOM05D001111 ORTHO05D000939 2.2e-08 63.5 157 35.7
Nitab4.5_0001483g0080 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.8e-08 63.2 154 33.8
Gohir.A03G139100 Gossypium hirsutum HOM05D001111 ORTHO05D000939 3.7e-08 62.8 112 39.3
Gohir.D02G162000 Gossypium hirsutum HOM05D001111 ORTHO05D000939 3.7e-08 62.8 107 41.1
QL03p060170 Quercus lobata HOM05D001111 ORTHO05D000939 3.7e-08 62.8 123 39.8
Carub.0002s1711 Capsella rubella HOM05D001111 ORTHO05D000939 4.8e-08 62.4 141 37.6
CiPaw.11G026300 Carya illinoinensis HOM05D001111 ORTHO05D000939 4.8e-08 62.4 196 32.1
Duzib147G1636 Durio zibethinus HOM05D001111 ORTHO05D000939 4.8e-08 62.4 233 31.8
Nitab4.5_0009783g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 4.8e-08 62.4 163 33.7
Sopen03g033450 Solanum pennellii HOM05D001111 ORTHO05D000939 4.8e-08 62.4 158 38.6
Gorai.005G182000 Gossypium raimondii HOM05D001111 ORTHO05D000939 6.3e-08 62.0 112 39.3
Duzib205G1255 Durio zibethinus HOM05D001111 ORTHO05D000939 8.2e-08 61.6 218 30.7
Medtr5g034230 Medicago truncatula HOM05D001111 ORTHO05D000939 1.4e-07 60.8 130 34.6
C02p27600 Brassica napus HOM05D001111 ORTHO05D000939 1.8e-07 60.5 164 32.9
TAR622G0132 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.8e-07 60.5 142 42.3
CARHR063590 Cardamine hirsuta HOM05D001111 ORTHO05D000939 2.4e-07 60.1 132 36.4
Duzib068G0287 Durio zibethinus HOM05D001111 ORTHO05D000939 2.4e-07 60.1 179 31.3
FAN05G2415 Fragaria x ananassa HOM05D001111 ORTHO05D000939 2.4e-07 60.1 234 31.2
Nitab4.5_0000203g0250 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.4e-07 60.1 144 31.2
SGA_v2.0_scaffold224G42977 Striga asiatica HOM05D001111 ORTHO05D000939 2.4e-07 60.1 172 31.4
Duzib268G1217 Durio zibethinus HOM05D001111 ORTHO05D000939 3.1e-07 59.7 151 34.4
FAN22G0614 Fragaria x ananassa HOM05D001111 ORTHO05D000939 3.1e-07 59.7 190 33.2
MD13G1092700 Malus domestica HOM05D001111 ORTHO05D000939 3.1e-07 59.7 192 33.3
FvH4_4g34370 Fragaria vesca HOM05D001111 ORTHO05D000939 4.1e-07 59.3 148 34.5
FAN12G3240 Fragaria x ananassa HOM05D001111 ORTHO05D000939 4.1e-07 59.3 148 34.5
PGSC0003DMG400045223 Solanum tuberosum HOM05D001111 ORTHO05D000939 4.1e-07 59.3 206 32.0
DCAR_007087 Daucus carota HOM05D001111 ORTHO05D000939 5.3e-07 58.9 170 32.4
Hma1.2p1_0536F.1_g174000 Hydrangea macrophylla HOM05D001111 ORTHO05D000939 6.9e-07 58.5 112 41.1
Sopen04g010680 Solanum pennellii HOM05D001111 ORTHO05D000939 6.9e-07 58.5 137 35.0
CAN.G781.10 Capsicum annuum HOM05D001111 ORTHO05D000939 9.0e-07 58.2 159 35.8
FAN09G0168 Fragaria x ananassa HOM05D001111 ORTHO05D000939 9.0e-07 58.2 171 35.7
Manes.13G029800 Manihot esculenta HOM05D001111 ORTHO05D000939 9.0e-07 58.2 163 32.5
AT1G70420 Arabidopsis thaliana HOM05D001111 ORTHO05D000939 1.2e-06 57.8 173 30.6
PGSC0003DMG400013482 Solanum tuberosum HOM05D001111 ORTHO05D000939 1.2e-06 57.8 111 39.6
SGA_v2.0_scaffold135G34879 Striga asiatica HOM05D001111 ORTHO05D000939 1.2e-06 57.8 176 33.0
CANSAT01G0717 Cannabis sativa HOM05D001111 ORTHO05D000939 1.5e-06 57.4 139 33.1
MBI16_g32208_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 1.5e-06 57.4 198 33.3
Oeu054059.1 Olea europaea HOM05D001111 ORTHO05D000939 1.5e-06 57.4 211 31.3
Thecc.03G012600 Theobroma cacao HOM05D001111 ORTHO05D000939 1.5e-06 57.4 202 29.7
TWI23G0219 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 1.5e-06 57.4 212 30.7
AT1G23710 Arabidopsis thaliana HOM05D001111 ORTHO05D000939 2.0e-06 57.0 171 35.1
Hma1.2p1_0176F.1_g077400 Hydrangea macrophylla HOM05D001111 ORTHO05D000939 2.0e-06 57.0 151 37.7
SGA_v2.0_scaffold165G38234 Striga asiatica HOM05D001111 ORTHO05D000939 2.0e-06 57.0 96 44.8
Lj9P449T21 Lonicera japonica HOM05D001111 ORTHO05D000939 2.6e-06 56.6 143 35.0
Rhsim08G0054000 Rhododendron simsii HOM05D001111 ORTHO05D000939 2.6e-06 56.6 206 29.6
Dinv15287 Davidia involucrata HOM05D001111 ORTHO05D000939 3.4e-06 56.2 155 33.5
FAN07G0616 Fragaria x ananassa HOM05D001111 ORTHO05D000939 3.4e-06 56.2 146 34.2
Glyma.01G030300 Glycine max HOM05D001111 ORTHO05D000939 3.4e-06 56.2 104 41.3
Nitab4.5_0001017g0090 Nicotiana tabacum HOM05D001111 ORTHO05D000939 3.4e-06 56.2 192 29.2
Phvul.004G013400 Phaseolus vulgaris HOM05D001111 ORTHO05D000939 3.4e-06 56.2 184 31.5
Thecc.04G010500 Theobroma cacao HOM05D001111 ORTHO05D000939 3.4e-06 56.2 212 30.7
Cpa.g.sc69.47 Carica papaya HOM05D001111 ORTHO05D000939 5.9e-06 55.5 118 39.0
Thhalv10008273m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 5.9e-06 55.5 159 32.1
FAN02G0682 Fragaria x ananassa HOM05D001111 ORTHO05D000939 5.9e-06 55.5 226 32.3
Rhsim12G0118800 Rhododendron simsii HOM05D001111 ORTHO05D000939 5.9e-06 55.5 183 28.4
Solyc04g024780.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 5.9e-06 55.5 156 32.7
TWI18G0496 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 5.9e-06 55.5 174 31.6
AL2G29790 Arabidopsis lyrata HOM05D001111 ORTHO05D000939 7.7e-06 55.1 156 32.7
Carub.0001s2323 Capsella rubella HOM05D001111 ORTHO05D000939 7.7e-06 55.1 108 42.6
CiPaw.05G151600 Carya illinoinensis HOM05D001111 ORTHO05D000939 7.7e-06 55.1 205 29.3
Dinv02893 Davidia involucrata HOM05D001111 ORTHO05D000939 7.7e-06 55.1 196 30.1
PGR119G0161 Punica granatum HOM05D001111 ORTHO05D000939 7.7e-06 55.1 161 35.4
SGA_v2.0_scaffold8G04207 Striga asiatica HOM05D001111 ORTHO05D000939 7.7e-06 55.1 139 33.1
Ca_03154_v3 Cicer arietinum L. HOM05D001111 ORTHO05D000939 1.0e-05 54.7 166 32.5
FAN14G5221 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.0e-05 54.7 222 31.1


User provided reference genes

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