Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g057030.2 Solanum lycopersicum HOM05D007557 ORTHO05D009573 2.4e-56 221.9 108 100.0
PGSC0003DMG400008555 Solanum tuberosum HOM05D007557 ORTHO05D009573 3.3e-45 184.9 96 90.6
CAN.G222.163 Capsicum annuum HOM05D007557 ORTHO05D009573 7.6e-42 173.7 106 74.5
Sopen12g029690 Solanum pennellii HOM05D007557 ORTHO05D009573 1.1e-37 159.8 76 97.4
Nitab4.5_0000232g0140 Nicotiana tabacum HOM05D007557 ORTHO05D009573 6.7e-30 134.0 108 57.4
Nitab4.5_0003631g0020 Nicotiana tabacum HOM05D007557 ORTHO05D009573 2.5e-29 132.1 110 55.5
Hund16904 Selenicereus undatus HOM05D007557 ORTHO05D009573 2.6e-26 122.1 107 51.4
Dinv44776 Davidia involucrata HOM05D007557 ORTHO05D009573 3.4e-26 121.7 107 53.3
Cc10_g07180 Coffea canephora HOM05D007557 ORTHO05D009573 4.2e-24 114.8 106 53.8
Aqoxy6G00779 Aquilegia oxysepala HOM05D007557 ORTHO05D009573 1.6e-23 112.8 94 50.0
Rhsim06G0081800 Rhododendron simsii HOM05D007557 ORTHO05D009573 1.6e-23 112.8 111 47.7
DCAR_012735 Daucus carota HOM05D007557 ORTHO05D009573 2.1e-23 112.5 108 45.4
vmacro21268 Vaccinium macrocarpon HOM05D007557 ORTHO05D009573 2.1e-23 112.5 105 51.4
Actinidia30774 Actinidia chinensis HOM05D007557 ORTHO05D009573 2.7e-23 112.1 100 55.0
HanXRQChr05g0162891 Helianthus annuus HOM05D007557 ORTHO05D009573 2.7e-23 112.1 98 50.0
PSO210G0208 Papaver somniferum HOM05D007557 ORTHO05D009573 3.6e-23 111.7 98 49.0
PSO447G0314 Papaver somniferum HOM05D007557 ORTHO05D009573 3.6e-23 111.7 98 49.0
Lj4A102T59 Lonicera japonica HOM05D007557 ORTHO05D009573 6.1e-23 110.9 106 49.1
Cpa.g.sc36.133 Carica papaya HOM05D007557 ORTHO05D009573 1.0e-22 110.2 103 50.5
MD15G1369400 Malus domestica HOM05D007557 ORTHO05D009573 3.0e-22 108.6 105 50.5
Eucgr.F00324 Eucalyptus grandis HOM05D007557 ORTHO05D009573 3.9e-22 108.2 101 49.5
FAN08G0381 Fragaria x ananassa HOM05D007557 ORTHO05D009573 6.7e-22 107.5 103 49.5
Hund26963 Selenicereus undatus HOM05D007557 ORTHO05D009573 6.7e-22 107.5 95 51.6
TAR625G0198 Trochodendron aralioides HOM05D007557 ORTHO05D009573 6.7e-22 107.5 101 47.5
RcHm_v2.0_Chr7g0238961 Rosa chinensis HOM05D007557 ORTHO05D009573 8.8e-22 107.1 106 48.1
FvH4_5g37320 Fragaria vesca HOM05D007557 ORTHO05D009573 1.1e-21 106.7 106 48.1
FAN18G1226 Fragaria x ananassa HOM05D007557 ORTHO05D009573 1.1e-21 106.7 106 48.1
Duzib093G0460 Durio zibethinus HOM05D007557 ORTHO05D009573 1.5e-21 106.3 101 50.5
MD08G1183000 Malus domestica HOM05D007557 ORTHO05D009573 1.5e-21 106.3 105 47.6
FAN04G0616 Fragaria x ananassa HOM05D007557 ORTHO05D009573 2.6e-21 105.5 102 49.0
Nn1g05358 Nelumbo nucifera HOM05D007557 ORTHO05D009573 3.3e-21 105.1 102 45.1
CiPaw.07G179800 Carya illinoinensis HOM05D007557 ORTHO05D009573 4.4e-21 104.8 101 48.5
Lsat_1_v5_gn_6_103041 Lactuca sativa HOM05D007557 ORTHO05D009573 4.4e-21 104.8 102 49.0
Duzib041G0047 Durio zibethinus HOM05D007557 ORTHO05D009573 7.4e-21 104.0 101 47.5
MBI05_g37049_MAGBIO Magnolia biondii HOM05D007557 ORTHO05D009573 9.7e-21 103.6 96 46.9
Duzib093G1199 Durio zibethinus HOM05D007557 ORTHO05D009573 1.3e-20 103.2 101 49.5
Atru.chr13.1185 Acer truncatum HOM05D007557 ORTHO05D009573 1.7e-20 102.8 103 46.6
Gohir.A05G267100 Gossypium hirsutum HOM05D007557 ORTHO05D009573 2.8e-20 102.1 101 46.5
Thecc.08G106600 Theobroma cacao HOM05D007557 ORTHO05D009573 2.8e-20 102.1 102 49.0
Manes.02G152600 Manihot esculenta HOM05D007557 ORTHO05D009573 3.7e-20 101.7 109 44.0
COL.COLO4_16396 Corchorus olitorius HOM05D007557 ORTHO05D009573 4.8e-20 101.3 102 47.1
QL12p036790 Quercus lobata HOM05D007557 ORTHO05D009573 4.8e-20 101.3 100 46.0
Ah.05g169950 Amaranthus hybridus HOM05D007557 ORTHO05D009573 6.3e-20 100.9 102 45.1
Sc26g0000100 Simmondsia chinensis HOM05D007557 ORTHO05D009573 6.3e-20 100.9 95 48.4
Prupe.1G517300 Prunus persica HOM05D007557 ORTHO05D009573 1.1e-19 100.1 105 46.7
Cfa013637 Carpinus fangiana HOM05D007557 ORTHO05D009573 1.4e-19 99.8 101 46.5
CDE03G0188 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 1.4e-19 99.8 104 43.3
Os07g0622900 Oryza sativa ssp. japonica HOM05D007557 ORTHO05D009573 1.4e-19 99.8 104 47.1
Gorai.009G281300 Gossypium raimondii HOM05D007557 ORTHO05D009573 1.8e-19 99.4 103 43.7
CDE06G2682 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 2.4e-19 99.0 104 43.3
CANSAT25G0704 Cannabis sativa HOM05D007557 ORTHO05D009573 4.1e-19 98.2 98 48.0
Prupe.1G519000 Prunus persica HOM05D007557 ORTHO05D009573 9.1e-19 97.1 105 46.7
TPR.G34528 Trifolium pratense HOM05D007557 ORTHO05D009573 1.2e-18 96.7 102 42.2
TWI12G0426 Tripterygium wilfordii HOM05D007557 ORTHO05D009573 1.2e-18 96.7 97 49.5
BraA05t21266Z Brassica rapa HOM05D007557 ORTHO05D009573 1.5e-18 96.3 106 43.4
AT1G34640 Arabidopsis thaliana HOM05D007557 ORTHO05D009573 3.4e-18 95.1 105 44.8
Zm00001eb327820 Zea mays HOM05D007557 ORTHO05D009573 3.4e-18 95.1 104 45.2
A05p23900 Brassica napus HOM05D007557 ORTHO05D009573 4.5e-18 94.7 96 45.8
BcaB03g13675 Brassica carinata HOM05D007557 ORTHO05D009573 5.9e-18 94.4 105 42.9
Duzib116G0255 Durio zibethinus HOM05D007557 ORTHO05D009573 5.9e-18 94.4 98 45.9
Thhalv10001839m.g Eutrema salsugineum HOM05D007557 ORTHO05D009573 5.9e-18 94.4 108 42.6
Gohir.D05G268700 Gossypium hirsutum HOM05D007557 ORTHO05D009573 7.7e-18 94.0 103 42.7
BcaC05g27757 Brassica carinata HOM05D007557 ORTHO05D009573 1.0e-17 93.6 105 42.9
CARHR033940 Cardamine hirsuta HOM05D007557 ORTHO05D009573 1.0e-17 93.6 105 42.9
C05p37510 Brassica napus HOM05D007557 ORTHO05D009573 1.3e-17 93.2 106 42.5
BolC5t32491H Brassica oleracea HOM05D007557 ORTHO05D009573 1.3e-17 93.2 106 42.5
Carub.0001s3264 Capsella rubella HOM05D007557 ORTHO05D009573 1.3e-17 93.2 105 42.9
Sp1g29760 Schrenkiella parvula HOM05D007557 ORTHO05D009573 1.7e-17 92.8 105 41.9
HPP92_005842 Vanilla planifolia HOM05D007557 ORTHO05D009573 2.2e-17 92.4 102 42.2
Lalb_Chr23g0270571 Lupinus albus HOM05D007557 ORTHO05D009573 6.5e-17 90.9 110 35.5
Potri.002G096700 Populus trichocarpa HOM05D007557 ORTHO05D009573 6.5e-17 90.9 97 43.3
ClCG11G014080 Citrullus lanatus HOM05D007557 ORTHO05D009573 8.5e-17 90.5 102 41.2
MELO3C003576.2 Cucumis melo HOM05D007557 ORTHO05D009573 8.5e-17 90.5 104 42.3
VMungo1309G0845 Vigna mungo HOM05D007557 ORTHO05D009573 2.5e-16 89.0 98 39.8
Glyma.04G102200 Glycine max HOM05D007557 ORTHO05D009573 5.5e-16 87.8 103 38.8
Glyma.06G103500 Glycine max HOM05D007557 ORTHO05D009573 5.5e-16 87.8 103 40.8
Sed0005506 Sechium edule HOM05D007557 ORTHO05D009573 5.5e-16 87.8 104 40.4
arahy.Tifrunner.gnm1.ann1.JHL0SX Arachis hypogaea HOM05D007557 ORTHO05D009573 7.2e-16 87.4 100 41.0
Medtr3g074500 Medicago truncatula HOM05D007557 ORTHO05D009573 9.4e-16 87.0 96 40.6
THA.LOC104816752 Tarenaya hassleriana HOM05D007557 ORTHO05D009573 9.4e-16 87.0 107 39.3
arahy.Tifrunner.gnm1.ann1.VD5D9J Arachis hypogaea HOM05D007557 ORTHO05D009573 1.6e-15 86.3 100 41.0
Migut.N02896 Erythranthe guttata HOM05D007557 ORTHO05D009573 6.1e-15 84.3 100 43.0
Phvul.009G031100 Phaseolus vulgaris HOM05D007557 ORTHO05D009573 1.8e-14 82.8 102 36.3
Psat5g138560 Pisum sativum HOM05D007557 ORTHO05D009573 2.3e-14 82.4 96 40.6
Psat5g138640 Pisum sativum HOM05D007557 ORTHO05D009573 2.3e-14 82.4 96 40.6
Haze_22270 Corylus avellana HOM05D007557 ORTHO05D009573 8.8e-14 80.5 93 45.2
Lj1g0024074 Lotus japonicus HOM05D007557 ORTHO05D009573 4.4e-13 78.2 99 38.4
Nn5g30104 Nelumbo nucifera HOM05D007557 ORTHO05D009573 1.7e-12 76.3 92 41.3
AUR62027760 Chenopodium quinoa HOM05D007557 ORTHO05D009573 2.4e-11 72.4 55 56.4
EL10Ac1g01212 Beta vulgaris HOM05D007557 ORTHO05D009573 1.2e-10 70.1 55 52.7
Ciclev10003485m.g Citrus clementina HOM05D007557 ORTHO05D009573 1.7e-09 66.2 59 45.8
Peaxi162Scf00160g01332 Petunia axillaris HOM05D007557 ORTHO05D009573 2.2e-09 65.9 59 61.0
Peaxi162Scf69669g00006 Petunia axillaris HOM05D007557 ORTHO05D009573 2.2e-09 65.9 59 61.0
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 3.8e-09 65.1 112 33.9
PGR042G1134 Punica granatum HOM05D007557 ORTHO05D009573 6.5e-09 64.3 58 50.0
Zm00001eb109640 Zea mays HOM05D007557 ORTHO05D009573 1.9e-08 62.8 69 44.9
CsaV3_3G047480 Cucumis sativus L. HOM05D007557 ORTHO05D009573 1.0e-06 57.0 59 40.7
Aa31LG6G8510 Aethionema arabicum HOM05D007557 ORTHO05D009573 1.4e-06 56.6 72 40.3


User provided reference genes

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