Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g049180.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.5e-46 191.0 94 100.0
Solyc12g049040.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 7.9e-32 142.1 92 78.3
Sopen12g023610 Solanum pennellii HOM05D008172 ORTHO05D007977 7.9e-32 142.1 92 78.3
Solyc12g049070.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.0e-31 141.7 92 76.1
Sopen12g023640 Solanum pennellii HOM05D008172 ORTHO05D007977 1.0e-31 141.7 92 77.2
Solyc12g049170.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.3e-31 140.6 92 78.3
Sopen12g023460 Solanum pennellii HOM05D008172 ORTHO05D007977 8.7e-31 138.7 92 76.1
Solyc12g049050.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.1e-30 138.3 92 76.1
Solyc12g049160.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.5e-30 137.9 92 76.1
Sopen12g023620 Solanum pennellii HOM05D008172 ORTHO05D007977 5.6e-30 136.0 88 77.3
Sopen12g023590 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-28 131.7 91 74.7
PGSC0003DMG400023862 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.4e-28 131.3 92 76.1
Sopen12g023630 Solanum pennellii HOM05D008172 ORTHO05D007977 9.0e-28 128.6 97 68.0
PGSC0003DMG400011614 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.5e-27 127.9 92 75.0
PGSC0003DMG400011615 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.0e-27 127.5 88 75.0
Solyc12g100090.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 7.6e-27 125.6 92 72.8
Sopen12g023470 Solanum pennellii HOM05D008172 ORTHO05D007977 2.2e-26 124.0 95 69.5
Solyc12g049140.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 8.4e-26 122.1 92 69.6
PGSC0003DMG400023861 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.2e-24 118.2 83 75.9
Sopen12g023600 Solanum pennellii HOM05D008172 ORTHO05D007977 1.0e-23 115.2 89 66.3
Sopen12g034730 Solanum pennellii HOM05D008172 ORTHO05D007977 1.3e-23 114.8 96 68.8
Sopen12g023450 Solanum pennellii HOM05D008172 ORTHO05D007977 1.8e-23 114.4 89 68.5
PGSC0003DMG400011600 Solanum tuberosum HOM05D008172 ORTHO05D007977 6.7e-23 112.5 94 66.0
Solyc12g049150.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 8.7e-23 112.1 89 65.2
Sopen12g034700 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-22 111.7 92 70.7
PGSC0003DMG400023859 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.1e-22 111.7 91 70.3
Solyc12g049090.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 9.6e-22 108.6 92 65.2
PGSC0003DMG400011599 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.6e-21 107.8 88 64.8
Solyc12g038240.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.0e-18 98.6 90 62.2
PGSC0003DMG400023858 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.0e-18 98.6 87 69.0
Sopen12g034720 Solanum pennellii HOM05D008172 ORTHO05D007977 4.9e-18 96.3 87 67.8
Sopen12g034710 Solanum pennellii HOM05D008172 ORTHO05D007977 2.5e-17 94.0 80 67.5
Sopen12g034740 Solanum pennellii HOM05D008172 ORTHO05D007977 4.2e-17 93.2 97 56.7
PGSC0003DMG400023857 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.2e-17 93.2 84 63.1
PGSC0003DMG400023855 Solanum tuberosum HOM05D008172 ORTHO05D007977 5.5e-17 92.8 114 50.9
Solyc12g038170.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 9.3e-17 92.0 89 60.7
PGSC0003DMG400006488 Solanum tuberosum HOM05D008172 ORTHO05D007977 9.3e-17 92.0 94 56.4
Solyc12g100100.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.2e-16 91.7 68 70.6
Solyc12g100080.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.8e-15 87.8 92 59.8
Solyc12g100110.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.3e-15 87.4 92 58.7
Sopen12g023480 Solanum pennellii HOM05D008172 ORTHO05D007977 3.7e-13 80.1 70 64.3
PGSC0003DMG400023856 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.8e-12 77.8 52 75.0
Sopen12g022950 Solanum pennellii HOM05D008172 ORTHO05D007977 2.4e-12 77.4 57 75.4
Sopen12g022940 Solanum pennellii HOM05D008172 ORTHO05D007977 2.6e-11 73.9 72 62.5
PGSC0003DMG400023860 Solanum tuberosum HOM05D040216 ORTHO05D051038 3.4e-11 73.6 39 87.2
Sopen12g022960 Solanum pennellii HOM05D008172 ORTHO05D007977 4.5e-11 73.2 66 65.2
PGSC0003DMG400006490 Solanum tuberosum HOM05D008172 ORTHO05D007977 5.9e-11 72.8 69 60.9
Sopen12g017900 Solanum pennellii HOM05D000002 ORTHO05D007977 7.6e-11 72.4 55 69.1
CAN.G575.61 Capsicum annuum HOM05D008172 ORTHO05D007977 2.2e-10 70.9 71 60.6
Sopen12g018240 Solanum pennellii HOM05D008172 ORTHO05D007977 2.2e-10 70.9 63 63.5
Sopen12g017410 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-09 68.6 52 69.2
Peaxi162Scf00062g01212 Petunia axillaris HOM05D008172 ORTHO05D007977 2.5e-09 67.4 51 66.7
Peaxi162Scf00062g01216 Petunia axillaris HOM05D008172 ORTHO05D007977 2.5e-09 67.4 51 66.7
Solyc12g044710.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.2e-09 67.0 95 49.5
PGSC0003DMG400006489 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.6e-08 63.2 72 51.4
Solyc12g038180.1 Solanum lycopersicum HOM05D040216 ORTHO05D051038 7.9e-08 62.4 34 82.4
Nitab4.5_0000508g0080 Nicotiana tabacum HOM05D008172 ORTHO05D007977 1.8e-07 61.2 54 61.1
Nitab4.5_0007819g0020 Nicotiana tabacum HOM05D008172 ORTHO05D007977 5.1e-07 59.7 54 61.1
Nitab4.5_0006164g0050 Nicotiana tabacum HOM05D008172 ORTHO05D283931 6.7e-07 59.3 57 54.4
Nitab4.5_0008647g0050 Nicotiana tabacum HOM05D008172 ORTHO05D007977 8.8e-07 58.9 98 41.8
Peaxi162Scf00062g01218 Petunia axillaris HOM05D008172 ORTHO05D007977 1.5e-06 58.2 49 59.2
Nitab4.5_0001925g0120 Nicotiana tabacum HOM05D008172 ORTHO05D007977 7.4e-06 55.8 47 61.7


User provided reference genes

Program Settings