Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g049040.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 6.0e-51 205.7 132 100.0
Sopen12g023610 Solanum pennellii HOM05D008172 ORTHO05D007977 6.2e-48 195.7 132 95.5
Solyc12g049070.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.4e-47 193.7 132 93.9
Solyc12g049160.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.0e-46 190.7 132 93.2
Sopen12g023460 Solanum pennellii HOM05D008172 ORTHO05D007977 9.9e-46 188.3 132 93.9
Sopen12g023640 Solanum pennellii HOM05D008172 ORTHO05D007977 1.3e-45 188.0 132 91.7
Solyc12g049050.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.9e-45 186.8 132 93.2
Sopen12g023620 Solanum pennellii HOM05D008172 ORTHO05D007977 4.9e-45 186.0 128 94.5
Solyc12g049170.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 7.1e-44 182.2 132 91.7
Sopen12g023470 Solanum pennellii HOM05D008172 ORTHO05D007977 4.3e-41 172.9 132 83.3
Sopen12g023590 Solanum pennellii HOM05D008172 ORTHO05D007977 6.2e-40 169.1 132 87.1
PGSC0003DMG400011615 Solanum tuberosum HOM05D008172 ORTHO05D007977 9.0e-39 165.2 128 85.9
Solyc12g049140.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.5e-38 164.5 132 84.8
PGSC0003DMG400011614 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.5e-38 162.9 132 85.6
PGSC0003DMG400023862 Solanum tuberosum HOM05D008172 ORTHO05D007977 6.4e-37 159.1 93 86.0
Solyc12g049090.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.2e-35 154.8 132 75.8
Solyc12g100090.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.1e-35 154.1 92 84.8
Sopen12g023600 Solanum pennellii HOM05D008172 ORTHO05D007977 1.3e-34 151.4 132 81.8
PGSC0003DMG400011599 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.8e-34 151.0 128 82.8
Sopen12g023630 Solanum pennellii HOM05D008172 ORTHO05D007977 2.5e-33 147.1 92 81.5
PGSC0003DMG400023861 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.3e-32 144.8 83 88.0
Solyc12g049150.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.8e-32 143.7 132 79.5
Solyc12g049180.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.8e-32 143.7 92 78.3
Sopen12g034730 Solanum pennellii HOM05D008172 ORTHO05D007977 3.1e-31 140.2 92 80.4
Sopen12g023450 Solanum pennellii HOM05D008172 ORTHO05D007977 4.5e-30 136.3 132 69.7
PGSC0003DMG400023859 Solanum tuberosum HOM05D008172 ORTHO05D007977 7.6e-30 135.6 91 79.1
Sopen12g034720 Solanum pennellii HOM05D008172 ORTHO05D007977 1.3e-26 124.8 88 78.4
Solyc12g038240.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.3e-26 124.0 94 68.1
Sopen12g034700 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-25 121.7 92 72.8
PGSC0003DMG400023858 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.1e-25 121.7 88 76.1
Sopen12g034710 Solanum pennellii HOM05D008172 ORTHO05D007977 1.9e-25 120.9 80 80.0
Solyc12g038170.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.5e-25 120.6 90 70.0
Sopen12g023480 Solanum pennellii HOM05D008172 ORTHO05D007977 2.2e-24 117.5 107 79.4
PGSC0003DMG400011600 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.4e-23 114.8 94 68.1
PGSC0003DMG400023857 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.1e-23 113.6 84 70.2
Sopen12g034740 Solanum pennellii HOM05D008172 ORTHO05D007977 1.9e-20 104.4 132 51.5
Solyc12g100100.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.5e-20 104.0 73 75.3
PGSC0003DMG400006488 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.5e-20 104.0 92 60.9
PGSC0003DMG400006490 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.2e-19 101.7 70 74.3
Solyc12g100080.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.6e-19 100.1 74 75.7
Solyc12g100110.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.6e-19 100.1 74 75.7
PGSC0003DMG400023855 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.6e-19 100.1 113 54.9
Sopen12g018240 Solanum pennellii HOM05D008172 ORTHO05D007977 1.7e-16 91.3 88 59.1
PGSC0003DMG400023856 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.2e-16 90.9 90 56.7
Sopen12g022940 Solanum pennellii HOM05D008172 ORTHO05D007977 8.2e-16 89.0 75 69.3
Sopen12g022950 Solanum pennellii HOM05D008172 ORTHO05D007977 8.2e-16 89.0 64 75.0
Sopen12g022960 Solanum pennellii HOM05D008172 ORTHO05D007977 1.8e-15 87.8 94 55.3
Solyc12g044710.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 9.1e-15 85.5 94 54.3
CAN.G575.61 Capsicum annuum HOM05D008172 ORTHO05D007977 2.6e-14 84.0 96 56.2
Sopen12g017900 Solanum pennellii HOM05D000002 ORTHO05D007977 4.5e-14 83.2 55 76.4
Sopen12g017410 Solanum pennellii HOM05D008172 ORTHO05D007977 3.2e-12 77.0 54 74.1
PGSC0003DMG400006489 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.2e-11 75.1 67 61.2
Peaxi162Scf00062g01212 Petunia axillaris HOM05D008172 ORTHO05D007977 6.1e-11 72.8 51 70.6
Peaxi162Scf00062g01216 Petunia axillaris HOM05D008172 ORTHO05D007977 6.1e-11 72.8 51 70.6
Nitab4.5_0000508g0080 Nicotiana tabacum HOM05D008172 ORTHO05D007977 1.0e-10 72.0 61 60.7
Nitab4.5_0007819g0020 Nicotiana tabacum HOM05D008172 ORTHO05D007977 1.1e-09 68.6 61 60.7
Nitab4.5_0008647g0050 Nicotiana tabacum HOM05D008172 ORTHO05D007977 2.0e-09 67.8 99 44.4
CAN.G575.57 Capsicum annuum HOM05D008172 ORTHO05D007977 9.7e-09 65.5 43 81.4
Nitab4.5_0001925g0070 Nicotiana tabacum HOM05D008172 ORTHO05D283996 1.7e-08 64.7 100 42.0
Nitab4.5_0001925g0120 Nicotiana tabacum HOM05D008172 ORTHO05D007977 6.3e-08 62.8 47 66.0
Nitab4.5_0006164g0050 Nicotiana tabacum HOM05D008172 ORTHO05D283931 6.3e-08 62.8 53 60.4
Peaxi162Scf00062g00114 Petunia axillaris HOM05D008172 ORTHO05D007977 8.2e-08 62.4 74 48.6
Peaxi162Scf00062g01218 Petunia axillaris HOM05D008172 ORTHO05D007977 1.8e-07 61.2 49 59.2
CAN.G575.59 Capsicum annuum HOM05D008172 ORTHO05D007977 9.1e-07 58.9 40 80.0
CAN.G3643.1 Capsicum annuum HOM05D008172 ORTHO05D007977 4.5e-06 56.6 40 77.5
PGSC0003DMG400004446 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.5e-06 56.6 69 47.8
CAN.G575.58 Capsicum annuum HOM05D008172 ORTHO05D007977 7.7e-06 55.8 40 77.5


User provided reference genes

Program Settings