Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g044780.2 Solanum lycopersicum HOM05D008706 ORTHO05D010440 3.1e-198 694.9 336 100.0
Solyc12g044790.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 1.9e-184 649.0 326 96.3
Solyc12g044775.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 2.8e-183 645.2 326 94.5
Sopen12g023120 Solanum pennellii HOM05D008706 ORTHO05D010440 3.6e-183 644.8 326 94.8
Sopen12g023140 Solanum pennellii HOM05D008706 ORTHO05D010440 3.1e-182 641.7 326 94.2
Sopen12g023130 Solanum pennellii HOM05D008706 ORTHO05D010440 1.3e-180 636.3 326 93.9
CAN.G546.3 Capsicum annuum HOM05D008706 ORTHO05D010440 1.8e-118 429.9 361 60.4
PGSC0003DMG400008116 Solanum tuberosum HOM05D008706 ORTHO05D010440 5.7e-112 408.3 326 62.3
PGSC0003DMG400008068 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.4e-110 403.7 328 62.5
CAN.G546.5 Capsicum annuum HOM05D008706 ORTHO05D010440 3.1e-89 332.8 260 64.6
Solyc11g069120.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 1.2e-77 294.3 242 63.6
Nitab4.5_0001201g0040 Nicotiana tabacum HOM05D008706 ORTHO05D010440 2.1e-77 293.5 340 49.7
Peaxi162Scf00347g00087 Petunia axillaris HOM05D008706 ORTHO05D010440 6.0e-77 292.0 335 49.6
Sopen12g023150 Solanum pennellii HOM05D008706 ORTHO05D010440 8.1e-74 281.6 173 76.3
Peaxi162Scf00073g00111 Petunia axillaris HOM05D008706 ORTHO05D010440 1.4e-73 280.8 297 53.5
PGSC0003DMG400024780 Solanum tuberosum HOM05D008706 ORTHO05D010440 2.4e-73 280.0 324 50.3
Sopen01g043690 Solanum pennellii HOM05D008706 ORTHO05D010440 9.9e-72 274.6 325 48.9
Sopen01g043720 Solanum pennellii HOM05D008706 ORTHO05D010440 9.9e-72 274.6 325 48.9
Nitab4.5_0008157g0050 Nicotiana tabacum HOM05D008706 ORTHO05D010440 1.4e-70 270.8 339 47.8
Nitab4.5_0002715g0100 Nicotiana tabacum HOM05D008706 ORTHO05D010440 3.5e-69 266.2 326 48.5
Nitab4.5_0002715g0090 Nicotiana tabacum HOM05D008706 ORTHO05D010440 2.5e-67 260.0 335 51.3
Nitab4.5_0001201g0090 Nicotiana tabacum HOM05D008706 ORTHO05D010440 7.1e-62 241.9 337 43.3
Peaxi162Scf00136g00622 Petunia axillaris HOM05D008706 ORTHO05D010440 1.4e-54 217.6 307 45.9
PGSC0003DMG400009874 Solanum tuberosum HOM05D008706 ORTHO05D010440 2.4e-54 216.9 336 42.6
PGSC0003DMG400009944 Solanum tuberosum HOM05D008706 ORTHO05D010440 4.2e-54 216.1 329 41.0
PGSC0003DMG400037185 Solanum tuberosum HOM05D008706 ORTHO05D010440 9.3e-54 214.9 344 40.7
PGSC0003DMG400037851 Solanum tuberosum HOM05D008706 ORTHO05D010440 3.3e-51 206.5 340 40.6
Nitab4.5_0000368g0410 Nicotiana tabacum HOM05D008706 ORTHO05D010440 4.8e-50 202.6 331 41.7
PGSC0003DMG400009945 Solanum tuberosum HOM05D008706 ORTHO05D010440 7.9e-45 185.3 309 40.5
Peaxi162Scf01164g00027 Petunia axillaris HOM05D008706 ORTHO05D010440 8.2e-42 175.3 326 37.4
Peaxi162Scf01164g10021 Petunia axillaris HOM05D008706 ORTHO05D010440 7.6e-40 168.7 334 36.2
Peaxi162Scf00105g00614 Petunia axillaris HOM05D008706 ORTHO05D010440 2.2e-39 167.2 222 44.6
Sopen11g027850 Solanum pennellii HOM05D008706 ORTHO05D010440 1.2e-37 161.4 121 61.2
Peaxi162Scf01026g00232 Petunia axillaris HOM05D008706 ORTHO05D010440 6.1e-37 159.1 280 39.3
PGSC0003DMG400022280 Solanum tuberosum HOM05D008706 ORTHO05D010440 4.8e-34 149.4 335 32.5
CAN.G1476.3 Capsicum annuum HOM05D008706 ORTHO05D010440 2.5e-30 137.1 343 31.2
CAN.G396.6 Capsicum annuum HOM05D008706 ORTHO05D010440 6.7e-20 102.4 207 33.3
Nitab4.5_0006875g0050 Nicotiana tabacum HOM05D008706 ORTHO05D010440 5.3e-17 92.8 157 40.8
Actinidia26989 Actinidia chinensis HOM05D007779 ORTHO05D010440 9.1e-17 92.0 278 27.7
CsaV3_3G028310 Cucumis sativus L. HOM05D021455 ORTHO05D010440 2.6e-16 90.5 272 26.8
Rhsim08G0237800 Rhododendron simsii HOM05D001729 ORTHO05D001155 2.5e-14 84.0 297 26.6
ClCG00G005860 Citrullus lanatus HOM05D021455 ORTHO05D010440 1.2e-13 81.6 335 25.4
ClCG07G001350 Citrullus lanatus HOM05D021455 ORTHO05D010440 1.2e-13 81.6 335 25.4
Nitab4.5_0003349g0020 Nicotiana tabacum HOM05D008706 ORTHO05D010440 2.7e-13 80.5 132 40.9
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 6.1e-13 79.3 305 24.9
PGSC0003DMG400039069 Solanum tuberosum HOM05D008706 ORTHO05D010440 2.3e-12 77.4 128 35.2
Aqoxy7G01704 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 3.9e-12 76.6 313 25.2
Sed0013342 Sechium edule HOM05D021455 ORTHO05D010440 5.2e-12 76.3 329 24.3
CARHR209310 Cardamine hirsuta HOM05D007779 ORTHO05D009863 1.5e-11 74.7 318 24.5
Aqoxy7G01734 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 1.3e-10 71.6 318 25.5
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 1.7e-10 71.2 244 28.3
Carub.0006s0291 Capsella rubella HOM05D007779 ORTHO05D009863 2.2e-10 70.9 330 23.6
Peaxi162Scf00314g00026 Petunia axillaris HOM05D033978 ORTHO05D024718 1.4e-09 68.2 222 27.9
Aa31LG1G21350 Aethionema arabicum HOM05D007779 ORTHO05D009863 2.4e-09 67.4 326 24.8
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 2.4e-09 67.4 297 22.2
Sp6g38780 Schrenkiella parvula HOM05D007779 ORTHO05D009863 2.4e-09 67.4 322 22.4
Atru.chr2.884 Acer truncatum HOM05D007779 ORTHO05D009863 5.3e-09 66.2 302 23.5
Rhsim08G0238800 Rhododendron simsii HOM05D001729 ORTHO05D001155 5.3e-09 66.2 308 24.7
Cfa006387 Carpinus fangiana HOM05D007779 ORTHO05D009863 7.0e-09 65.9 306 23.5
Duzib177G0763 Durio zibethinus HOM05D007779 ORTHO05D009863 9.1e-09 65.5 312 22.4
Glyma.19G246800 Glycine max HOM05D007779 ORTHO05D009863 1.2e-08 65.1 305 23.0
vmacro20454 Vaccinium macrocarpon HOM05D007779 ORTHO05D009863 1.2e-08 65.1 169 31.4
Thecc.05G277100 Theobroma cacao HOM05D007779 ORTHO05D009863 1.6e-08 64.7 324 23.5
Aqoxy1G00049 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 2.0e-08 64.3 282 23.0
Medtr7g115440 Medicago truncatula HOM05D007779 ORTHO05D009863 3.5e-08 63.5 306 23.2
TAR626G1986 Trochodendron aralioides HOM05D000664 ORTHO05D000491 3.5e-08 63.5 319 24.8
HanXRQChr02g0054011 Helianthus annuus HOM05D002420 ORTHO05D002422 5.9e-08 62.8 244 26.6
Phvul.006G104000 Phaseolus vulgaris HOM05D007779 ORTHO05D009863 5.9e-08 62.8 305 23.0
Haze_04390 Corylus avellana HOM05D007779 ORTHO05D009863 7.7e-08 62.4 306 23.5
TPR.G6996 Trifolium pratense HOM05D007779 ORTHO05D009863 7.7e-08 62.4 305 22.6
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 1.3e-07 61.6 297 22.9
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 1.3e-07 61.6 297 22.2
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 1.3e-07 61.6 297 22.2
Rhsim08G0219900 Rhododendron simsii HOM05D001729 ORTHO05D001155 1.3e-07 61.6 311 25.7
VMungo0540G1456 Vigna mungo HOM05D007779 ORTHO05D009863 1.3e-07 61.6 321 22.4
arahy.Tifrunner.gnm1.ann1.C2UZEY Arachis hypogaea HOM05D007779 ORTHO05D009863 2.2e-07 60.8 301 22.3
Aqoxy4G02867 Aquilegia oxysepala HOM05D000664 ORTHO05D010440 2.9e-07 60.5 299 25.4
CiPaw.01G036300 Carya illinoinensis HOM05D002420 ORTHO05D002422 2.9e-07 60.5 254 26.4
arahy.Tifrunner.gnm1.ann1.DL8VF6 Arachis hypogaea HOM05D007779 ORTHO05D009863 3.8e-07 60.1 301 21.9
CSS0029544 Camellia sinensis var. sinensis HOM05D002420 ORTHO05D002422 3.8e-07 60.1 286 24.5
Aqoxy7G00772 Aquilegia oxysepala HOM05D008706 ORTHO05D010440 6.5e-07 59.3 144 31.2
Thhalv10013722m.g Eutrema salsugineum HOM05D007779 ORTHO05D009863 8.5e-07 58.9 328 21.6
Gohir.A12G196800 Gossypium hirsutum HOM05D000664 ORTHO05D000491 8.5e-07 58.9 305 23.9
PSO782G2286 Papaver somniferum HOM05D002420 ORTHO05D002422 1.5e-06 58.2 272 22.1
Psat0s3161g0280 Pisum sativum HOM05D007779 ORTHO05D009863 1.5e-06 58.2 305 23.0
PSO541G4811 Papaver somniferum HOM05D008326 ORTHO05D001155 1.9e-06 57.8 212 24.5
A09p54400 Brassica napus HOM05D007779 ORTHO05D009863 3.2e-06 57.0 160 25.0
Nitab4.5_0002715g0110 Nicotiana tabacum HOM05D000488 ORTHO05D010440 3.2e-06 57.0 80 42.5
Haze_15106 Corylus avellana HOM05D002420 ORTHO05D002422 4.2e-06 56.6 279 24.7
Peaxi162Scf00105g00613 Petunia axillaris HOM05D008706 ORTHO05D010440 4.2e-06 56.6 48 56.2
THA.LOC104805831 Tarenaya hassleriana HOM05D007779 ORTHO05D009863 4.2e-06 56.6 148 28.4
BraA09t40853Z Brassica rapa HOM05D007779 ORTHO05D009863 7.2e-06 55.8 160 25.6
Gohir.D12G199300 Gossypium hirsutum HOM05D000664 ORTHO05D000491 7.2e-06 55.8 165 29.7
Gorai.008G214500 Gossypium raimondii HOM05D000664 ORTHO05D000491 7.2e-06 55.8 165 29.7
Thecc.03G222100 Theobroma cacao HOM05D001729 ORTHO05D001155 7.2e-06 55.8 307 22.5
DCAR_018084 Daucus carota HOM05D000664 ORTHO05D000491 9.4e-06 55.5 230 25.7
PSO675G7142 Papaver somniferum HOM05D008326 ORTHO05D001155 9.4e-06 55.5 236 24.2
SGA_v2.0_scaffold157G37347 Striga asiatica HOM05D007162 ORTHO05D007631 9.4e-06 55.5 219 24.2


User provided reference genes

Program Settings