Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g044710.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 7.4e-36 155.2 285 100.0
Sopen12g022960 Solanum pennellii HOM05D008172 ORTHO05D007977 1.7e-32 144.1 94 93.6
Sopen12g022950 Solanum pennellii HOM05D008172 ORTHO05D007977 2.9e-24 116.7 94 80.9
PGSC0003DMG400023857 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.4e-20 102.8 69 78.3
PGSC0003DMG400006488 Solanum tuberosum HOM05D008172 ORTHO05D007977 5.3e-18 95.9 94 69.1
PGSC0003DMG400023862 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.7e-16 90.9 93 53.8
Solyc12g038240.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.0e-16 89.4 93 55.9
PGSC0003DMG400011614 Solanum tuberosum HOM05D008172 ORTHO05D007977 8.5e-16 88.6 65 69.2
Solyc12g049170.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.1e-15 88.2 94 54.3
Sopen12g022940 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-15 88.2 73 65.8
Sopen12g023470 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-15 88.2 94 54.3
Solyc12g049040.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.5e-15 87.8 94 54.3
Sopen12g018240 Solanum pennellii HOM05D008172 ORTHO05D007977 1.9e-15 87.4 65 70.8
Sopen12g023640 Solanum pennellii HOM05D008172 ORTHO05D007977 4.2e-15 86.3 94 53.2
Sopen12g023610 Solanum pennellii HOM05D008172 ORTHO05D007977 2.1e-14 84.0 94 52.1
Solyc12g038170.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.7e-14 82.8 65 63.1
Solyc12g049160.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.7e-14 82.8 94 51.1
Solyc12g049070.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 6.1e-14 82.4 94 51.1
Sopen12g023460 Solanum pennellii HOM05D008172 ORTHO05D007977 8.0e-14 82.0 94 51.1
PGSC0003DMG400011600 Solanum tuberosum HOM05D008172 ORTHO05D007977 8.0e-14 82.0 65 64.6
PGSC0003DMG400023856 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.0e-13 81.6 57 71.9
PGSC0003DMG400023858 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.0e-13 81.6 65 67.7
Solyc12g049050.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.4e-13 81.3 94 51.1
Solyc12g049090.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.0e-13 80.1 94 52.1
Sopen12g034730 Solanum pennellii HOM05D008172 ORTHO05D007977 4.0e-13 79.7 94 51.1
Solyc12g049140.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 8.8e-13 78.6 94 50.0
Sopen12g023620 Solanum pennellii HOM05D008172 ORTHO05D007977 8.8e-13 78.6 90 51.1
PGSC0003DMG400011599 Solanum tuberosum HOM05D008172 ORTHO05D007977 8.8e-13 78.6 90 63.3
PGSC0003DMG400011615 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.2e-12 78.2 90 51.1
Sopen12g017410 Solanum pennellii HOM05D008172 ORTHO05D007977 2.0e-12 77.4 57 68.4
PGSC0003DMG400023861 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.4e-12 76.6 61 63.9
Sopen12g023590 Solanum pennellii HOM05D008172 ORTHO05D007977 1.7e-11 74.3 80 56.2
Solyc12g100090.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.2e-11 73.9 93 47.3
PGSC0003DMG400023855 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.2e-11 73.9 64 60.9
Sopen12g017900 Solanum pennellii HOM05D000002 ORTHO05D007977 2.8e-11 73.6 55 67.3
Sopen12g023630 Solanum pennellii HOM05D008172 ORTHO05D007977 4.8e-11 72.8 64 62.5
Sopen12g034740 Solanum pennellii HOM05D008172 ORTHO05D007977 4.8e-11 72.8 91 49.5
PGSC0003DMG400023859 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.8e-11 72.8 65 60.0
Sopen12g034700 Solanum pennellii HOM05D008172 ORTHO05D007977 8.3e-11 72.0 93 47.3
Solyc12g100080.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.4e-10 71.2 65 60.0
Solyc12g100110.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.4e-10 71.2 65 60.0
Solyc12g100100.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.8e-10 70.9 66 60.6
Solyc12g049180.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.4e-10 70.5 95 49.5
PGSC0003DMG400006489 Solanum tuberosum HOM05D008172 ORTHO05D007977 5.3e-10 69.3 67 64.2
Sopen12g023450 Solanum pennellii HOM05D008172 ORTHO05D007977 9.1e-10 68.6 56 66.1
Peaxi162Scf00062g01212 Petunia axillaris HOM05D008172 ORTHO05D007977 2.0e-09 67.4 57 61.4
Peaxi162Scf00062g01216 Petunia axillaris HOM05D008172 ORTHO05D007977 2.0e-09 67.4 57 61.4
Sopen12g023600 Solanum pennellii HOM05D008172 ORTHO05D007977 2.0e-09 67.4 65 60.0
PGSC0003DMG400006490 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.0e-09 67.4 43 69.8
Solyc12g049150.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.5e-09 66.6 65 60.0
CAN.G575.61 Capsicum annuum HOM05D008172 ORTHO05D007977 4.5e-09 66.2 61 60.7
Sopen12g034710 Solanum pennellii HOM05D008172 ORTHO05D007977 7.7e-09 65.5 65 58.5
Peaxi162Scf00062g00114 Petunia axillaris HOM05D008172 ORTHO05D007977 2.2e-08 63.9 73 49.3
Sopen12g034720 Solanum pennellii HOM05D008172 ORTHO05D007977 2.2e-08 63.9 65 56.9
Nitab4.5_0007819g0020 Nicotiana tabacum HOM05D008172 ORTHO05D007977 1.5e-07 61.2 56 60.7
Nitab4.5_0008647g0050 Nicotiana tabacum HOM05D008172 ORTHO05D007977 4.2e-07 59.7 60 58.3
Peaxi162Scf00062g01218 Petunia axillaris HOM05D008172 ORTHO05D007977 4.2e-07 59.7 56 55.4
Nitab4.5_0000508g0080 Nicotiana tabacum HOM05D008172 ORTHO05D007977 5.5e-07 59.3 56 58.9
PGSC0003DMG400004446 Solanum tuberosum HOM05D008172 ORTHO05D007977 7.2e-07 58.9 37 67.6
Nitab4.5_0001925g0070 Nicotiana tabacum HOM05D008172 ORTHO05D283996 6.1e-06 55.8 54 57.4


User provided reference genes

Program Settings