Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g040815.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 3.6e-58 228.0 113 100.0
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 4.0e-41 171.4 145 66.2
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 6.8e-41 170.6 145 65.5
Sopen01g030890 Solanum pennellii HOM05D000679 ORTHO05D000137 6.3e-39 164.1 146 64.4
Sopen08g017850 Solanum pennellii HOM05D000679 ORTHO05D000137 3.1e-38 161.8 138 64.5
Sopen12g021510 Solanum pennellii HOM05D000679 ORTHO05D000137 4.1e-38 161.4 144 66.0
Sopen12g024080 Solanum pennellii HOM05D000679 ORTHO05D000137 7.0e-38 160.6 144 66.0
Solyc01g059760.3 Solanum lycopersicum HOM05D000679 ORTHO05D000137 2.7e-37 158.7 139 64.7
Sopen10g007030 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-32 142.9 134 61.9
Sopen06g010730 Solanum pennellii HOM05D000679 ORTHO05D000137 5.7e-32 141.0 145 58.6
Sopen12g024090 Solanum pennellii HOM05D000679 ORTHO05D000137 7.8e-29 130.6 70 91.4
Sopen11g022980 Solanum pennellii HOM05D000679 ORTHO05D000137 1.7e-28 129.4 99 69.7
Sopen11g009970 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-25 119.4 69 89.9
Solyc12g044952.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 2.3e-25 119.0 113 60.2
Sopen01g026480 Solanum pennellii HOM05D000679 ORTHO05D000137 6.4e-23 110.9 130 46.9
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 8.3e-23 110.5 130 46.9
Sopen05g022570 Solanum pennellii HOM05D000679 ORTHO05D000137 4.1e-22 108.2 130 46.2
Sopen09g029010 Solanum pennellii HOM05D000679 ORTHO05D000137 5.4e-22 107.8 130 46.2
Sopen07g017260 Solanum pennellii HOM05D000679 ORTHO05D000137 5.9e-21 104.4 116 56.0
Solyc01g057857.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.5e-19 99.8 70 67.1
Solyc10g047822.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.5e-19 99.8 70 67.1
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 2.5e-19 99.0 70 65.7
Solyc03g083850.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 5.6e-19 97.8 70 64.3
Sopen05g010340 Solanum pennellii HOM05D000679 ORTHO05D000137 9.5e-19 97.1 70 64.3
Solyc09g055717.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 6.2e-18 94.4 70 62.9
Sopen09g020980 Solanum pennellii HOM05D000679 ORTHO05D000137 8.9e-17 90.5 70 61.4
Solyc12g150116.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 8.3e-15 84.0 61 63.9
Sopen07g006510 Solanum pennellii HOM05D000541 ORTHO05D000137 8.3e-15 84.0 45 84.4
Nitab4.5_0004917g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.7e-12 76.3 101 44.6
Nitab4.5_0005521g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-11 73.6 114 42.1
Nitab4.5_0000207g0350 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-11 72.8 134 37.3
Nitab4.5_0000210g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.3e-11 72.0 134 35.8
CAN.G1077.11 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-10 70.1 122 33.6
Nitab4.5_0001140g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.2e-10 70.1 80 43.8
Nitab4.5_0000383g0370 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.6e-10 69.7 134 35.1
Nitab4.5_0000425g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.1e-10 69.3 132 35.6
Nitab4.5_0001446g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.8e-10 68.9 134 35.1
Nitab4.5_0026057g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.8e-10 68.9 132 35.6
Nitab4.5_0005869g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.6e-10 68.6 141 35.5
Sopen01g016320 Solanum pennellii HOM05D000679 ORTHO05D000482 8.1e-10 67.4 45 80.0
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-09 67.0 136 35.3
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-09 67.0 134 34.3
Nitab4.5_0007600g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-09 66.6 134 35.1
Nitab4.5_0001019g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.8e-09 66.2 136 34.6
Nitab4.5_0008167g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.8e-09 66.2 98 41.8
Nitab4.5_0000365g0080 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.3e-09 65.9 77 44.2
Nitab4.5_0000457g0260 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.3e-09 65.9 128 32.8
Nitab4.5_0010618g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.1e-09 65.5 126 34.9
Sopen07g006520 Solanum pennellii HOM05D000679 ORTHO05D000137 4.0e-09 65.1 61 59.0
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 4.0e-09 65.1 132 31.8
CAN.G43.14 Capsicum annuum HOM05D000679 ORTHO05D000137 5.2e-09 64.7 79 39.2
Nitab4.5_0004143g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.8e-09 64.3 136 34.6
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 6.8e-09 64.3 128 34.4
CAN.G168.29 Capsicum annuum HOM05D000679 ORTHO05D000137 8.9e-09 63.9 75 40.0
Nitab4.5_0000692g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.9e-09 63.9 77 42.9
Nitab4.5_0004496g0060 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.9e-09 63.9 128 36.7
CAN.G437.7 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-08 63.5 133 31.6
Nitab4.5_0000035g0260 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-08 63.5 118 36.4
Nitab4.5_0008901g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-08 63.5 132 34.8
Nitab4.5_0009017g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-08 63.5 136 33.8
Nitab4.5_0013025g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.5e-08 63.2 136 34.6
CAN.G341.8 Capsicum annuum HOM05D000679 ORTHO05D000137 2.0e-08 62.8 79 38.0
CAN.G572.43 Capsicum annuum HOM05D000679 ORTHO05D000137 2.0e-08 62.8 149 27.5
CAN.G257.82 Capsicum annuum HOM05D000679 ORTHO05D000137 2.6e-08 62.4 75 38.7
Nitab4.5_0000648g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.4e-08 62.0 78 41.0
Nitab4.5_0001472g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.4e-08 62.0 136 33.8
Nitab4.5_0008288g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.4e-08 62.0 136 33.1
Nitab4.5_0015150g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.4e-08 62.0 136 33.1
PGSC0003DMG400000873 Solanum tuberosum HOM05D000679 ORTHO05D000137 3.4e-08 62.0 133 33.8
CAN.G880.10 Capsicum annuum HOM05D000679 ORTHO05D000137 4.4e-08 61.6 75 37.3
Nitab4.5_0000814g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.8e-08 61.2 109 37.6
Nitab4.5_0000900g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.8e-08 61.2 71 43.7
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 5.8e-08 61.2 128 30.5
CAN.G821.11 Capsicum annuum HOM05D000679 ORTHO05D000137 7.5e-08 60.8 75 38.7
Nitab4.5_0007636g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.5e-08 60.8 71 43.7
Nitab4.5_0011890g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.5e-08 60.8 71 43.7
CAN.G1085.1 Capsicum annuum HOM05D000679 ORTHO05D000137 9.9e-08 60.5 101 33.7
CAN.G610.86 Capsicum annuum HOM05D000679 ORTHO05D000137 9.9e-08 60.5 75 37.3
Nitab4.5_0002495g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.9e-08 60.5 134 32.8
CAN.G1006.3 Capsicum annuum HOM05D000679 ORTHO05D000137 1.3e-07 60.1 75 38.7
CAN.G1239.12 Capsicum annuum HOM05D000679 ORTHO05D000137 1.3e-07 60.1 75 40.0
CAN.G1755.3 Capsicum annuum HOM05D000679 ORTHO05D000137 1.3e-07 60.1 75 40.0
Nitab4.5_0008752g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.3e-07 60.1 114 36.8
CAN.G1415.4 Capsicum annuum HOM05D000679 ORTHO05D000137 1.7e-07 59.7 75 38.7
CAN.G53.11 Capsicum annuum HOM05D000679 ORTHO05D000137 1.7e-07 59.7 75 41.3
Nitab4.5_0001030g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.7e-07 59.7 75 44.0
CAN.G1232.3 Capsicum annuum HOM05D000679 ORTHO05D000137 2.2e-07 59.3 70 38.6
CAN.G89.22 Capsicum annuum HOM05D000679 ORTHO05D000137 2.2e-07 59.3 75 38.7
CAN.G105.2 Capsicum annuum HOM05D000679 ORTHO05D000137 2.9e-07 58.9 75 38.7
CAN.G1191.13 Capsicum annuum HOM05D000679 ORTHO05D000137 2.9e-07 58.9 135 31.1
CAN.G759.1 Capsicum annuum HOM05D000679 ORTHO05D000137 2.9e-07 58.9 112 30.4
Nitab4.5_0003264g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.9e-07 58.9 70 45.7
Nitab4.5_0010874g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.9e-07 58.9 136 32.4
CAN.G1089.23 Capsicum annuum HOM05D000679 ORTHO05D000137 3.7e-07 58.5 75 38.7
CAN.G571.11 Capsicum annuum HOM05D000679 ORTHO05D000137 3.7e-07 58.5 75 37.3
Nitab4.5_0002162g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.9e-07 58.2 71 42.3
CAN.G1095.33 Capsicum annuum HOM05D000679 ORTHO05D000137 6.4e-07 57.8 75 38.7
Nitab4.5_0000159g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.4e-07 57.8 126 31.7
Nitab4.5_0000347g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.4e-07 57.8 78 41.0
Nitab4.5_0006819g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.4e-07 57.8 78 38.5
Solyc02g038801.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 6.4e-07 57.8 65 41.5
Solyc12g150127.1 Solanum lycopersicum HOM05D010988 ORTHO05D000137 6.4e-07 57.8 70 40.0
Sopen10g010760 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-07 57.8 65 46.2
CAN.G1266.2 Capsicum annuum HOM05D000679 ORTHO05D000137 8.3e-07 57.4 79 36.7
CAN.G208.33 Capsicum annuum HOM05D000679 ORTHO05D000137 1.4e-06 56.6 75 36.0
CAN.G211.8 Capsicum annuum HOM05D000679 ORTHO05D000137 1.4e-06 56.6 100 34.0
CAN.G46.35 Capsicum annuum HOM05D000679 ORTHO05D000137 1.4e-06 56.6 75 37.3
Solyc12g017670.3 Solanum lycopersicum HOM05D010988 ORTHO05D000137 1.9e-06 56.2 65 40.0
Nitab4.5_0000553g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.4e-06 55.8 124 30.6
CAN.G472.2 Capsicum annuum HOM05D000679 ORTHO05D000137 4.1e-06 55.1 75 34.7
Nitab4.5_0002612g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.1e-06 55.1 71 42.3
CAN.G1273.10 Capsicum annuum HOM05D000679 ORTHO05D000137 5.4e-06 54.7 69 34.8
CAN.G637.41 Capsicum annuum HOM05D000679 ORTHO05D000137 5.4e-06 54.7 73 35.6
CAN.G1405.9 Capsicum annuum HOM05D000679 ORTHO05D000137 7.1e-06 54.3 70 35.7
Sopen10g022330 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 54.3 115 33.0
PGSC0003DMG400020636 Solanum tuberosum HOM05D001838 ORTHO05D000137 7.1e-06 54.3 71 39.4
CAN.G1093.7 Capsicum annuum HOM05D000679 ORTHO05D000137 9.2e-06 53.9 68 36.8
CAN.G269.4 Capsicum annuum HOM05D000679 ORTHO05D000137 9.2e-06 53.9 79 35.4
CAN.G364.1 Capsicum annuum HOM05D000679 ORTHO05D000137 9.2e-06 53.9 75 34.7
Nitab4.5_0002879g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.2e-06 53.9 71 40.8
Nitab4.5_0003772g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.2e-06 53.9 95 37.9


User provided reference genes

Program Settings