Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g036790.2 Solanum lycopersicum HOM05D004512 ORTHO05D005355 2.4e-68 261.9 122 100.0
Sopen12g018390 Solanum pennellii HOM05D004512 ORTHO05D005355 2.4e-52 208.8 96 99.0
PGSC0003DMG400023110 Solanum tuberosum HOM05D004512 ORTHO05D005355 2.0e-51 205.7 96 95.8
Nitab4.5_0006638g0020 Nicotiana tabacum HOM05D004512 ORTHO05D005355 7.8e-51 203.8 96 95.8
CAN.G121.2 Capsicum annuum HOM05D004512 ORTHO05D005355 1.0e-50 203.4 99 91.9
CAN.G790.56 Capsicum annuum HOM05D004512 ORTHO05D005355 1.0e-50 203.4 96 94.8
Nitab4.5_0000208g0260 Nicotiana tabacum HOM05D004512 ORTHO05D005355 1.0e-50 203.4 96 94.8
Peaxi162Scf00634g00116 Petunia axillaris HOM05D004512 ORTHO05D005355 5.6e-49 197.6 96 92.7
Cc04_g07140 Coffea canephora HOM05D004512 ORTHO05D005355 5.8e-46 187.6 96 86.5
Cfa019782 Carpinus fangiana HOM05D004512 ORTHO05D005355 7.5e-46 187.2 96 88.5
Haze_18669 Corylus avellana HOM05D004512 ORTHO05D005355 7.5e-46 187.2 96 88.5
CSS0004107 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 4.9e-45 184.5 96 86.5
CSS0044395 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 1.4e-44 183.0 104 80.8
TAR374G1478 Trochodendron aralioides HOM05D004512 ORTHO05D005355 1.9e-44 182.6 96 83.3
Manes.05G137500 Manihot esculenta HOM05D004512 ORTHO05D005355 2.4e-44 182.2 97 85.6
TAR371G0608 Trochodendron aralioides HOM05D004512 ORTHO05D005355 4.1e-44 181.4 95 85.3
Hma1.2p1_0653F.1_g196320 Hydrangea macrophylla HOM05D004512 ORTHO05D005355 5.4e-44 181.0 96 84.4
Oeu046994.1 Olea europaea HOM05D004512 ORTHO05D005355 5.4e-44 181.0 97 85.6
CiPaw.16G085900 Carya illinoinensis HOM05D004512 ORTHO05D005355 9.2e-44 180.3 96 84.4
QL10p025263 Quercus lobata HOM05D004512 ORTHO05D005355 9.2e-44 180.3 96 83.3
Manes.01G011800 Manihot esculenta HOM05D004512 ORTHO05D005355 1.6e-43 179.5 97 83.5
Aqoxy3G00301 Aquilegia oxysepala HOM05D004512 ORTHO05D005355 2.1e-43 179.1 96 83.3
ClCG00G005470 Citrullus lanatus HOM05D004512 ORTHO05D005355 2.1e-43 179.1 115 74.8
Potri.012G056900 Populus trichocarpa HOM05D004512 ORTHO05D005355 2.1e-43 179.1 97 82.5
Potri.015G054700 Populus trichocarpa HOM05D004512 ORTHO05D005355 2.7e-43 178.7 97 83.5
arahy.Tifrunner.gnm1.ann1.HI5GUI Arachis hypogaea HOM05D004512 ORTHO05D005355 3.5e-43 178.3 97 84.5
arahy.Tifrunner.gnm1.ann1.K20T5Q Arachis hypogaea HOM05D004512 ORTHO05D005355 3.5e-43 178.3 97 84.5
MELO3C002086.2 Cucumis melo HOM05D004512 ORTHO05D005355 3.5e-43 178.3 96 84.4
CsaV3_1G006620 Cucumis sativus L. HOM05D004512 ORTHO05D005355 3.5e-43 178.3 96 84.4
Hund02392 Selenicereus undatus HOM05D004512 ORTHO05D005355 6.0e-43 177.6 97 81.4
CANSAT80G1137 Cannabis sativa HOM05D004512 ORTHO05D005355 7.8e-43 177.2 96 81.2
CANSAT80G2616 Cannabis sativa HOM05D004512 ORTHO05D005355 7.8e-43 177.2 96 81.2
Sabra12G0040400 Salix brachista HOM05D004512 ORTHO05D005355 7.8e-43 177.2 96 83.3
Duzib068G0917 Durio zibethinus HOM05D004512 ORTHO05D005355 1.0e-42 176.8 97 84.5
vmacro12793 Vaccinium macrocarpon HOM05D004512 ORTHO05D005355 1.0e-42 176.8 96 82.3
CiPaw.15G130400 Carya illinoinensis HOM05D004512 ORTHO05D005355 1.3e-42 176.4 96 80.2
Sed0021676 Sechium edule HOM05D004512 ORTHO05D005355 1.7e-42 176.0 96 81.2
ClCG04G011140 Citrullus lanatus HOM05D004512 ORTHO05D005355 2.3e-42 175.6 97 81.4
Gohir.A09G047600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 3.0e-42 175.3 97 83.5
Gohir.D09G048700 Gossypium hirsutum HOM05D004512 ORTHO05D005355 3.0e-42 175.3 97 83.5
Gorai.006G061400 Gossypium raimondii HOM05D004512 ORTHO05D005355 3.0e-42 175.3 97 83.5
PGR142G1335 Punica granatum HOM05D004512 ORTHO05D005355 3.0e-42 175.3 97 83.5
Thecc.03G034700 Theobroma cacao HOM05D004512 ORTHO05D005355 3.0e-42 175.3 97 83.5
MD06G1215900 Malus domestica HOM05D004512 ORTHO05D005355 3.9e-42 174.9 118 72.0
Rhsim12G0143400 Rhododendron simsii HOM05D004512 ORTHO05D005355 6.6e-42 174.1 96 80.2
Atru.chr9.839 Acer truncatum HOM05D004512 ORTHO05D005355 8.6e-42 173.7 97 82.5
MD14G1226500 Malus domestica HOM05D004512 ORTHO05D005355 1.5e-41 172.9 97 83.5
Prupe.5G221100 Prunus persica HOM05D004512 ORTHO05D005355 1.5e-41 172.9 97 81.4
Sed0004773 Sechium edule HOM05D004512 ORTHO05D005355 1.5e-41 172.9 96 80.2
HPP92_020802 Vanilla planifolia HOM05D004512 ORTHO05D005355 1.9e-41 172.6 96 80.2
Gohir.A08G094600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 3.3e-41 171.8 97 81.4
MSTRG.22945 Avicennia marina HOM05D004512 ORTHO05D005355 5.6e-41 171.0 97 79.4
Duzib205G0602 Durio zibethinus HOM05D004512 ORTHO05D005355 5.6e-41 171.0 97 81.4
Duzib205G1322 Durio zibethinus HOM05D004512 ORTHO05D005355 5.6e-41 171.0 97 81.4
Gohir.D08G105800 Gossypium hirsutum HOM05D004512 ORTHO05D005355 5.6e-41 171.0 97 81.4
Gorai.004G113100 Gossypium raimondii HOM05D004512 ORTHO05D005355 5.6e-41 171.0 97 81.4
Sc12g0007720 Simmondsia chinensis HOM05D004512 ORTHO05D005355 5.6e-41 171.0 97 83.5
Cpa.g.sc3.515 Carica papaya HOM05D004512 ORTHO05D005355 7.3e-41 170.6 97 81.4
DCAR_011353 Daucus carota HOM05D004512 ORTHO05D005355 7.3e-41 170.6 96 81.2
THA.LOC104821841 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 7.3e-41 170.6 97 79.4
Ca_25495_v3 Cicer arietinum L. HOM05D004512 ORTHO05D005355 9.5e-41 170.2 97 79.4
Glyma.07G091500 Glycine max HOM05D004512 ORTHO05D005355 9.5e-41 170.2 97 80.4
TPR.G27937 Trifolium pratense HOM05D004512 ORTHO05D005355 1.2e-40 169.9 97 79.4
Medtr6g084520 Medicago truncatula HOM05D004512 ORTHO05D005355 1.6e-40 169.5 98 78.6
Psat1g037680 Pisum sativum HOM05D004512 ORTHO05D005355 1.6e-40 169.5 96 80.2
THA.LOC104820396 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 1.6e-40 169.5 97 78.4
ATR1125G038 Amborella trichopoda HOM05D004512 ORTHO05D005355 2.1e-40 169.1 95 80.0
Eucgr.K02221 Eucalyptus grandis HOM05D004512 ORTHO05D005355 2.1e-40 169.1 97 76.3
EL10Ac5g11436 Beta vulgaris HOM05D004512 ORTHO05D005355 3.6e-40 168.3 97 78.4
AUR62029861 Chenopodium quinoa HOM05D004512 ORTHO05D005355 3.6e-40 168.3 97 80.4
DCAR_015141 Daucus carota HOM05D004512 ORTHO05D005355 3.6e-40 168.3 96 80.2
AT1G49140 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 4.7e-40 167.9 97 77.3
Carub.0001s3830 Capsella rubella HOM05D004512 ORTHO05D005355 4.7e-40 167.9 97 77.3
PSO782G2824 Papaver somniferum HOM05D004512 ORTHO05D005355 6.2e-40 167.5 95 76.8
Aa31LG10G4840 Aethionema arabicum HOM05D004512 ORTHO05D005355 8.1e-40 167.2 97 77.3
AT3G18410 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 8.1e-40 167.2 97 76.3
Carub.0003s1819 Capsella rubella HOM05D004512 ORTHO05D005355 8.1e-40 167.2 97 76.3
Thhalv10011884m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 8.1e-40 167.2 97 77.3
SGA_v2.0_scaffold19G08815 Striga asiatica HOM05D004512 ORTHO05D005355 8.1e-40 167.2 97 80.4
VMungo0464G1721 Vigna mungo HOM05D004512 ORTHO05D005355 8.1e-40 167.2 96 80.2
CARHR039120 Cardamine hirsuta HOM05D004512 ORTHO05D005355 1.1e-39 166.8 97 76.3
AL3G31700 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 1.4e-39 166.4 97 76.3
Thhalv10022379m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 1.4e-39 166.4 97 76.3
CARHR093770 Cardamine hirsuta HOM05D004512 ORTHO05D005355 1.8e-39 166.0 97 76.3
Glyma.09G184500 Glycine max HOM05D004512 ORTHO05D005355 1.8e-39 166.0 96 79.2
Sp1g36030 Schrenkiella parvula HOM05D004512 ORTHO05D005355 1.8e-39 166.0 97 77.3
SGA_v2.0_scaffold25G10991 Striga asiatica HOM05D004512 ORTHO05D005355 1.8e-39 166.0 97 79.4
A01p35940 Brassica napus HOM05D004512 ORTHO05D005355 2.3e-39 165.6 97 75.3
BraA01t03675Z Brassica rapa HOM05D004512 ORTHO05D005355 2.3e-39 165.6 97 75.3
AUR62025859 Chenopodium quinoa HOM05D004512 ORTHO05D005355 2.3e-39 165.6 97 79.4
Phvul.004G157200 Phaseolus vulgaris HOM05D004512 ORTHO05D005355 2.3e-39 165.6 96 78.1
BcaB04g20765 Brassica carinata HOM05D004512 ORTHO05D005355 3.1e-39 165.2 97 75.3
BcaC09g48802 Brassica carinata HOM05D004512 ORTHO05D005355 3.1e-39 165.2 97 75.3
C01p45770 Brassica napus HOM05D004512 ORTHO05D005355 3.1e-39 165.2 97 75.3
BolC1t04540H Brassica oleracea HOM05D004512 ORTHO05D005355 3.1e-39 165.2 97 75.3
Lj2g0019547 Lotus japonicus HOM05D004512 ORTHO05D005355 3.1e-39 165.2 97 76.3
Lalb_Chr22g0353061 Lupinus albus HOM05D004512 ORTHO05D005355 3.1e-39 165.2 97 78.4
CDE12G0498 Ceratophyllum demersum HOM05D004512 ORTHO05D005355 4.0e-39 164.9 96 81.2
HanXRQChr08g0226081 Helianthus annuus HOM05D004512 ORTHO05D005355 5.2e-39 164.5 96 79.2
Lsat_1_v5_gn_8_144301 Lactuca sativa HOM05D004512 ORTHO05D005355 5.2e-39 164.5 96 80.2
SalBow5G1005 Salvia bowleyana HOM05D004512 ORTHO05D005355 5.2e-39 164.5 97 76.3
AL1G56000 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 6.8e-39 164.1 97 75.3
BcaC01g03699 Brassica carinata HOM05D004512 ORTHO05D005355 6.8e-39 164.1 97 75.3
C03p49450 Brassica napus HOM05D004512 ORTHO05D005355 6.8e-39 164.1 97 75.3
BolC3t17241H Brassica oleracea HOM05D004512 ORTHO05D005355 6.8e-39 164.1 97 75.3
ECA233G5146 Erigeron canadensis HOM05D004512 ORTHO05D005355 6.8e-39 164.1 96 79.2
Ciclev10022984m.g Citrus clementina HOM05D004512 ORTHO05D005355 8.9e-39 163.7 97 78.4
Lalb_Chr24g0397761 Lupinus albus HOM05D004512 ORTHO05D005355 8.9e-39 163.7 97 77.3
Aa31LG8G5240 Aethionema arabicum HOM05D004512 ORTHO05D005355 1.2e-38 163.3 97 75.3
FvH4_5g12140 Fragaria vesca HOM05D004512 ORTHO05D005355 1.5e-38 162.9 97 78.4
FAN04G1546 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.5e-38 162.9 97 78.4
FAN08G0397 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.5e-38 162.9 97 78.4
FAN13G2727 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.5e-38 162.9 97 78.4
FAN18G1297 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.5e-38 162.9 97 78.4
FAN18G2044 Fragaria x ananassa HOM05D004512 ORTHO05D005355 1.5e-38 162.9 97 78.4
A03p40660 Brassica napus HOM05D004512 ORTHO05D005355 2.0e-38 162.5 97 74.2
BraA03t13222Z Brassica rapa HOM05D004512 ORTHO05D005355 2.0e-38 162.5 97 74.2
BcaC05g28630 Brassica carinata HOM05D004512 ORTHO05D005355 2.6e-38 162.2 97 75.3
A05p31210 Brassica napus HOM05D004512 ORTHO05D005355 2.6e-38 162.2 97 75.3
C05p47340 Brassica napus HOM05D004512 ORTHO05D005355 2.6e-38 162.2 97 75.3
BolC5t33461H Brassica oleracea HOM05D004512 ORTHO05D005355 2.6e-38 162.2 97 75.3
BraA05t21962Z Brassica rapa HOM05D004512 ORTHO05D005355 2.6e-38 162.2 97 75.3
BcaB04g18985 Brassica carinata HOM05D004512 ORTHO05D005355 3.4e-38 161.8 97 73.2
RcHm_v2.0_Chr7g0185431 Rosa chinensis HOM05D004512 ORTHO05D005355 3.4e-38 161.8 97 77.3
Sp3g16520 Schrenkiella parvula HOM05D004512 ORTHO05D005355 3.4e-38 161.8 97 74.2
TWI81G1036 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 3.4e-38 161.8 95 75.8
BcaB06g25886 Brassica carinata HOM05D004512 ORTHO05D005355 4.4e-38 161.4 97 75.3
Migut.I00347 Erythranthe guttata HOM05D004512 ORTHO05D005355 7.6e-38 160.6 97 75.3
unitig_26.g9674 Utricularia gibba HOM05D004512 ORTHO05D005355 1.7e-37 159.5 97 75.3
Zm00001eb024750 Zea mays HOM05D004512 ORTHO05D005355 1.7e-37 159.5 95 74.7
Zm00001eb224900 Zea mays HOM05D004512 ORTHO05D005355 2.2e-37 159.1 95 74.7
Nitab4.5_0007985g0060 Nicotiana tabacum HOM05D004512 ORTHO05D005355 3.2e-36 155.2 79 83.5
unitig_749.g13425 Utricularia gibba HOM05D004512 ORTHO05D005355 7.1e-36 154.1 97 73.2
TWI60G0557 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 1.7e-34 149.4 97 71.1
HanXRQChr16g0517341 Helianthus annuus HOM05D004512 ORTHO05D005355 2.1e-32 142.5 84 78.6
Nn3g17841 Nelumbo nucifera HOM05D004512 ORTHO05D005355 5.8e-30 134.4 70 85.7
COL.COLO4_05967 Corchorus olitorius HOM05D004512 ORTHO05D005355 7.6e-30 134.0 67 89.6
CAN.G519.12 Capsicum annuum HOM05D004512 ORTHO05D005355 2.9e-29 132.1 71 83.1
CAN.G133.16 Capsicum annuum HOM05D004512 ORTHO05D005355 8.4e-29 130.6 68 88.2
Pp3c9_26150 Physcomitrium patens HOM05D004512 ORTHO05D005355 6.0e-27 124.4 90 64.4
AagrBONN_evm.TU.Sc2ySwM_117.17 Anthoceros agrestis HOM05D004512 ORTHO05D005355 7.8e-27 124.0 91 62.6
AagrBONN_evm.TU.Sc2ySwM_228.463 Anthoceros agrestis HOM05D004512 ORTHO05D005355 1.3e-26 123.2 91 62.6
Mapoly0004s0055 Marchantia polymorpha HOM05D004512 ORTHO05D005355 1.5e-25 119.8 86 61.6
MD15G1306200 Malus domestica HOM05D004512 ORTHO05D005355 2.5e-25 119.0 74 74.3
MD14G1197200 Malus domestica HOM05D004512 ORTHO05D005355 2.4e-23 112.5 74 77.0
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 6.9e-23 110.9 89 60.7
Prupe.2G045100 Prunus persica HOM05D004512 ORTHO05D005355 1.2e-22 110.2 65 76.9
SMO169G0039 Selaginella moellendorffii HOM05D004512 ORTHO05D005355 5.8e-22 107.8 84 56.0
Os10g0576000 Oryza sativa ssp. japonica HOM05D004512 ORTHO05D005355 1.7e-18 96.3 49 79.6
Prupe.1G218000 Prunus persica HOM05D004512 ORTHO05D005355 1.4e-15 86.7 97 50.5
MCO12G018 Micromonas commoda HOM05D004512 ORTHO05D005355 2.4e-15 85.9 73 49.3
BcaB02g11300 Brassica carinata HOM05D004512 ORTHO05D005355 1.3e-13 80.1 66 57.6
SEGI_01620 Sequoiadendron giganteum HOM05D004512 ORTHO05D005355 3.8e-13 78.6 50 74.0
Nitab4.5_0001194g0030 Nicotiana tabacum HOM05D004512 ORTHO05D005355 6.4e-13 77.8 48 72.9
Duzib084G0409 Durio zibethinus HOM05D004512 ORTHO05D005355 5.4e-12 74.7 54 66.7
Dinv09796 Davidia involucrata HOM05D004512 ORTHO05D005355 1.0e-10 70.5 36 88.9
Actinidia35087 Actinidia chinensis HOM05D004512 ORTHO05D005355 1.6e-08 63.2 36 80.6
PRCOL_00001312 Prasinoderma coloniale HOM05D004512 ORTHO05D005355 1.4e-07 60.1 87 39.1


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