Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 9.3e-98 360.1 174 100.0
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 2.5e-95 352.1 174 97.7
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 2.5e-87 325.5 177 92.7
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 2.6e-76 288.9 183 82.0
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 2.2e-75 285.8 183 81.4
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 2.7e-73 278.9 180 81.1
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 1.8e-69 266.2 181 79.0
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 1.1e-66 256.9 183 72.1
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 3.6e-65 251.9 186 73.7
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 1.8e-64 249.6 183 68.3
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 5.1e-64 248.1 185 71.4
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 1.1e-63 246.9 183 67.8
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 1.5e-63 246.5 180 71.1
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 1.5e-63 246.5 180 71.1
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 4.3e-63 245.0 169 72.8
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 9.7e-63 243.8 185 67.0
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 2.8e-62 242.3 183 67.2
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 4.1e-61 238.4 184 67.4
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 5.3e-61 238.0 122 91.8
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 3.8e-59 231.9 182 67.6
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 8.5e-59 230.7 180 66.1
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 8.5e-59 230.7 127 84.3
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 8.5e-59 230.7 178 69.7
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 3.2e-58 228.8 181 67.4
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 5.5e-58 228.0 127 86.6
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 5.5e-58 228.0 169 71.0
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 7.2e-58 227.6 186 64.5
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 9.4e-58 227.3 177 67.8
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 2.1e-57 226.1 182 65.9
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 2.7e-57 225.7 129 84.5
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 4.7e-57 224.9 155 72.3
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 7.9e-57 224.2 183 64.5
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 5.1e-56 221.5 178 67.4
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 8.8e-56 220.7 117 93.2
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 1.1e-55 220.3 177 63.8
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.0e-55 219.5 187 64.7
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.0e-55 219.5 187 64.7
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 2.0e-55 219.5 165 69.7
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.6e-55 219.2 187 64.7
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 2.6e-55 219.2 181 64.1
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 4.4e-55 218.4 178 66.9
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 5.7e-55 218.0 122 81.1
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 9.7e-55 217.2 135 77.8
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 9.7e-55 217.2 187 64.2
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 9.7e-55 217.2 171 64.9
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 2.2e-54 216.1 136 72.8
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 2.8e-54 215.7 181 63.5
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 2.8e-54 215.7 182 63.2
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 3.7e-54 215.3 127 81.9
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 3.7e-54 215.3 121 82.6
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 3.7e-54 215.3 178 66.3
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 3.7e-54 215.3 160 68.8
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 3.7e-54 215.3 160 68.8
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 8.2e-54 214.2 176 64.2
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 1.1e-53 213.8 171 66.1
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 1.8e-53 213.0 181 63.5
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 2.4e-53 212.6 176 61.9
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 4.1e-53 211.8 176 63.6
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 1.2e-52 210.3 157 66.2
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 1.5e-52 209.9 176 63.1
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 3.4e-52 208.8 182 63.7
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 1.3e-51 206.8 175 64.6
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 1.7e-51 206.5 161 65.8
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 2.2e-51 206.1 152 67.8
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 2.9e-51 205.7 171 64.9
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 2.9e-51 205.7 161 65.2
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 2.9e-51 205.7 153 67.3
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 3.8e-51 205.3 127 77.2
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 5.0e-51 204.9 128 76.6
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 5.0e-51 204.9 171 63.7
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 1.4e-50 203.4 163 63.2
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 3.2e-50 202.2 171 63.2
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 1.2e-49 200.3 171 63.2
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 1.2e-49 200.3 171 63.2
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 1.2e-49 200.3 155 65.2
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 1.6e-49 199.9 172 64.0
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 2.7e-49 199.1 171 63.2
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 2.7e-49 199.1 171 63.2
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 2.7e-49 199.1 121 76.9
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 2.7e-49 199.1 181 59.7
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 3.6e-49 198.7 160 65.0
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 4.7e-49 198.4 155 65.2
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 1.0e-48 197.2 171 62.6
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 1.0e-48 197.2 171 62.6
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 1.0e-48 197.2 171 62.6
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 1.4e-48 196.8 128 75.0
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 2.3e-48 196.1 109 81.7
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 3.0e-48 195.7 171 62.6
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 3.0e-48 195.7 120 78.3
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 3.9e-48 195.3 120 78.3
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 8.8e-48 194.1 164 62.2
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 1.1e-47 193.7 171 62.0
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 1.5e-47 193.4 171 62.0
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 1.5e-47 193.4 171 62.0
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 2.2e-46 189.5 111 78.4
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 6.3e-46 188.0 174 60.3
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 8.2e-46 187.6 146 65.1
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 2.0e-44 183.0 117 69.2
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 1.2e-41 173.7 174 53.4
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 2.1e-41 172.9 143 60.1
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 9.1e-37 157.5 171 53.8
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 8.0e-33 144.4 110 62.7
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 1.8e-29 133.3 123 55.3
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 2.5e-26 122.9 183 47.0
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 1.2e-23 114.0 114 51.8
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 1.7e-22 110.2 119 52.1
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 1.2e-20 104.0 103 49.5
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 1.0e-19 100.9 96 50.0
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 2.3e-19 99.8 102 43.1
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 1.7e-14 83.6 90 51.1
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 5.6e-10 68.6 181 34.3
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 3.6e-09 65.9 107 38.3
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 1.8e-08 63.5 52 71.2
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 5.8e-07 58.5 185 29.2


User provided reference genes

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