Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g035780.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-35 151.8 72 100.0
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 3.3e-25 117.9 70 84.3
CAN.G210.9 Capsicum annuum HOM05D000445 ORTHO05D000314 1.6e-24 115.5 70 82.9
Nitab4.5_0005100g0090 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.6e-24 115.5 70 82.9
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 1.6e-24 115.5 70 82.9
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-24 115.5 70 82.9
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-24 115.5 70 82.9
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-24 115.5 70 82.9
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-24 115.5 70 82.9
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-24 115.5 70 82.9
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-24 115.5 70 82.9
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 1.6e-24 115.5 70 82.9
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 2.8e-24 114.8 70 81.4
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 2.8e-24 114.8 70 81.4
unitig_91.g26515 Utricularia gibba HOM05D000445 ORTHO05D000314 2.8e-24 114.8 70 81.4
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 2.8e-24 114.8 70 81.4
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 4.8e-24 114.0 70 81.4
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 4.8e-24 114.0 70 81.4
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 4.8e-24 114.0 70 81.4
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 4.8e-24 114.0 70 81.4
SalBow1G2507 Salvia bowleyana HOM05D000445 ORTHO05D000314 6.2e-24 113.6 70 81.4
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 6.2e-24 113.6 70 82.9
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.4e-23 112.5 70 81.4
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.4e-23 112.5 70 81.4
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 1.4e-23 112.5 70 80.0
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 1.4e-23 112.5 70 80.0
SGA_v2.0_scaffold2596G54158 Striga asiatica HOM05D000445 ORTHO05D000314 1.8e-23 112.1 69 81.2
CAN.G1298.13 Capsicum annuum HOM05D000445 ORTHO05D000314 4.0e-23 110.9 70 80.0
Sed0009579 Sechium edule HOM05D000445 ORTHO05D000314 5.3e-23 110.5 70 80.0
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 6.9e-23 110.2 71 77.5
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 6.9e-23 110.2 70 80.0
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 9.0e-23 109.8 71 76.1
RcHm_v2.0_Chr2g0118451 Rosa chinensis HOM05D000445 ORTHO05D000314 9.0e-23 109.8 70 80.0
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 9.0e-23 109.8 73 79.5
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 2.6e-22 108.2 71 76.1
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 2.6e-22 108.2 71 76.1
Nitab4.5_0007104g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.6e-22 108.2 70 78.6
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 5.8e-22 107.1 70 77.1
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.0e-21 106.3 67 79.1
Lj2C1238G15 Lonicera japonica HOM05D000445 ORTHO05D000314 1.0e-21 106.3 70 78.6
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 1.3e-21 105.9 70 75.7
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 1.3e-21 105.9 70 75.7
Lsat_1_v5_gn_9_85820 Lactuca sativa HOM05D000445 ORTHO05D000314 1.3e-21 105.9 70 75.7
HanXRQChr11g0336111 Helianthus annuus HOM05D000445 ORTHO05D000314 1.7e-21 105.5 70 75.7
HanXRQChr11g0336131 Helianthus annuus HOM05D000445 ORTHO05D000314 1.7e-21 105.5 70 75.7
Nitab4.5_0020349g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.4e-20 102.4 70 74.3
Nitab4.5_0000011g0360 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.5e-20 101.7 70 71.4
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 7.1e-20 100.1 71 74.6
LjContig00318g0009654 Lotus japonicus HOM05D000445 ORTHO05D000314 1.2e-19 99.4 73 71.2
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 1.2e-19 99.4 73 71.2
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 1.2e-19 99.4 73 71.2
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 2.1e-19 98.6 72 73.6
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 2.1e-19 98.6 72 73.6
BraSC143t45672Z Brassica rapa HOM05D000445 ORTHO05D000314 2.1e-19 98.6 72 73.6
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 3.5e-19 97.8 70 75.7
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 3.5e-19 97.8 73 69.9
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 6.1e-19 97.1 73 71.2
BcaB02g11358 Brassica carinata HOM05D000445 ORTHO05D000314 7.9e-19 96.7 72 72.2
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 7.9e-19 96.7 72 72.2
BolSC29t60535H Brassica oleracea HOM05D000445 ORTHO05D000314 7.9e-19 96.7 72 72.2
BolSC29t60563H Brassica oleracea HOM05D000445 ORTHO05D000314 7.9e-19 96.7 72 72.2
BolSC29t60617H Brassica oleracea HOM05D000445 ORTHO05D000314 7.9e-19 96.7 72 72.2
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 1.8e-18 95.5 80 65.0
Nn020s41481 Nelumbo nucifera HOM05D000445 ORTHO05D000314 8.7e-18 93.2 58 81.0
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 8.7e-18 93.2 71 69.0
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 8.7e-18 93.2 71 69.0
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 1.5e-17 92.4 72 70.8
Aqoxy3G01862 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 3.3e-17 91.3 80 63.8
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 7.4e-17 90.1 58 79.3
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 7.4e-17 90.1 58 79.3
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 9.7e-17 89.7 99 54.5
Solyc03g078010.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-16 89.4 56 80.4
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 2.2e-16 88.6 69 72.5
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 2.2e-16 88.6 69 72.5
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 2.2e-16 88.6 69 72.5
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 2.2e-16 88.6 65 73.8
Solyc12g035980.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.2e-16 88.6 58 75.9
CAN.G1648.15 Capsicum annuum HOM05D000445 ORTHO05D000314 6.3e-16 87.0 62 74.2
HanXRQChr00c0349g0573981 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 58 75.9
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 8.2e-16 86.7 55 80.0
Lj2C1239G59 Lonicera japonica HOM05D000445 ORTHO05D000314 1.4e-15 85.9 58 77.6
Gorai.002G166000 Gossypium raimondii HOM05D000445 ORTHO05D000314 5.3e-15 84.0 57 73.7
Nitab4.5_0003101g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 9.0e-15 83.2 70 65.7
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 4.5e-14 80.9 70 64.3
BolSC47t61073H Brassica oleracea HOM05D000445 ORTHO05D000314 5.9e-14 80.5 60 73.3
Lju5009C0G1 Lonicera japonica HOM05D000445 ORTHO05D000314 1.1e-12 76.3 51 76.5
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 1.4e-12 75.9 48 79.2
Migut.O00730 Erythranthe guttata HOM05D000445 ORTHO05D000314 7.2e-12 73.6 43 83.7
Solyc03g120370.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.7e-11 71.6 43 81.4
Nitab4.5_0009685g0030 Nicotiana tabacum HOM05D003033 ORTHO05D003475 4.6e-11 70.9 54 70.4
Migut.D01323 Erythranthe guttata HOM05D000445 ORTHO05D000314 7.9e-11 70.1 54 70.4
Nn3g16494 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.8e-10 68.9 43 76.7
Solyc09g031820.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.1e-10 67.4 43 76.7
Nitab4.5_0001761g0320 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.7e-10 67.0 41 82.9
HanXRQChr00c0788g0577401 Helianthus annuus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 43 76.7
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 43 76.7
Hund01216 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund11510 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund19325 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund26851 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund26897 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund27472 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund29661 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
Hund29851 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.8e-10 66.6 39 82.1
arahy.Tifrunner.gnm1.ann1.A0N0CH Arachis hypogaea HOM05D000445 ORTHO05D000314 2.0e-09 65.5 43 74.4
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 1.3e-08 62.8 71 49.3
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 1.3e-08 62.8 71 49.3
Solyc02g011940.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-08 62.8 43 69.8
Solyc04g050850.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.2e-08 60.1 43 72.1
C09p24760 Brassica napus HOM05D000445 ORTHO05D000314 6.9e-07 57.0 45 66.7
Nitab4.5_0000496g0040 Nicotiana tabacum HOM05D000580 ORTHO05D001785 9.1e-07 56.6 40 72.5
CAN.G1738.15 Capsicum annuum HOM05D000445 ORTHO05D000314 1.2e-06 56.2 37 75.7
Nitab4.5_0002616g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.2e-06 56.2 51 62.7
Nitab4.5_0023562g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.2e-06 56.2 43 69.8


User provided reference genes

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