Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.3e-93 345.1 188 100.0
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 8.8e-62 240.7 181 70.7
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.8e-34 147.9 147 53.1
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.6e-33 144.8 149 49.7
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-29 133.7 115 59.1
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-28 129.8 127 55.1
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-27 125.9 97 69.1
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-26 124.0 104 62.5
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 1.0e-25 120.9 103 62.1
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 1.5e-24 117.1 133 46.6
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 2.5e-24 116.3 118 50.0
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-24 115.9 114 53.5
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.7e-23 112.1 95 61.1
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.1e-22 110.9 150 44.0
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.0e-22 107.8 118 44.9
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 1.5e-21 107.1 141 41.8
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.5e-21 107.1 109 54.1
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-20 103.6 105 53.3
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-20 103.6 117 43.6
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 3.8e-20 102.4 58 81.0
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-19 100.9 118 42.4
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-18 96.7 67 68.7
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-18 95.9 114 42.1
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.6e-18 95.5 63 73.0
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-17 94.4 118 41.5
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-17 94.0 72 63.9
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-17 93.2 78 62.8
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 3.0e-17 92.8 124 40.3
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 5.1e-17 92.0 153 37.9
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-17 92.0 117 40.2
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 6.6e-17 91.7 123 37.4
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.6e-17 91.7 67 65.7
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.6e-17 91.7 108 48.1
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-16 90.1 66 68.2
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 2.5e-16 89.7 153 37.3
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 2.5e-16 89.7 150 36.7
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-16 89.4 59 74.6
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.6e-16 88.6 69 58.0
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-15 87.4 60 70.0
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.1e-15 86.7 125 37.6
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 4.8e-15 85.5 62 67.7
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 8.1e-15 84.7 66 59.1
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-14 84.0 149 33.6
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-14 84.0 49 73.5
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 1.8e-14 83.6 88 51.1
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 6.9e-14 81.6 153 32.7
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.0e-13 80.1 133 33.1
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 3.4e-13 79.3 149 31.5
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 4.5e-13 79.0 151 36.4
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 5.8e-13 78.6 150 34.0
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 7.6e-13 78.2 149 31.5
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-13 77.8 98 40.8
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-12 77.4 68 54.4
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 2.2e-12 76.6 149 30.9
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 2.9e-12 76.3 132 35.6
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.9e-12 76.3 151 35.1
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 3.8e-12 75.9 148 31.8
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 3.8e-12 75.9 69 50.7
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 4.9e-12 75.5 128 35.2
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 6.4e-12 75.1 149 30.9
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 6.4e-12 75.1 66 51.5
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.4e-12 75.1 66 47.0
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-11 73.9 63 54.0
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-11 73.9 66 47.0
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-11 73.9 66 48.5
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 1.9e-11 73.6 70 50.0
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.9e-11 73.6 147 30.6
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-11 73.6 62 48.4
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-11 72.8 66 47.0
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-11 72.8 66 48.5
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.4e-11 72.0 66 47.0
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 9.3e-11 71.2 83 39.8
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.6e-10 70.5 49 67.3
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.1e-10 70.1 91 39.6
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-10 70.1 66 45.5
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.7e-10 69.7 62 50.0
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 2.7e-10 69.7 151 31.1
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 3.5e-10 69.3 126 34.1
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 3.5e-10 69.3 149 30.9
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 7.9e-10 68.2 148 31.1
Peaxi162Scf00992g00013 Petunia axillaris HOM05D003888 ORTHO05D007163 7.9e-10 68.2 92 40.2
Sopen02g008430 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-10 68.2 60 56.7
EL10Ac2g03390 Beta vulgaris HOM05D003888 ORTHO05D007163 1.3e-09 67.4 115 33.0
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.8e-09 67.0 62 46.8
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 2.3e-09 66.6 61 45.9
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 3.0e-09 66.2 149 31.5
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-09 65.5 62 50.0
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 8.7e-09 64.7 76 42.1
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.5e-08 63.9 66 42.4
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 1.9e-08 63.5 70 48.6
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-08 63.5 59 49.2
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 3.3e-08 62.8 150 28.7
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 3.3e-08 62.8 70 45.7
Nitab4.5_0001375g0180 Nicotiana tabacum HOM05D003888 ORTHO05D007163 3.3e-08 62.8 63 54.0
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-08 62.8 62 46.8
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.3e-08 62.4 101 32.7
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 7.4e-08 61.6 58 51.7
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.4e-08 61.6 61 45.9
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.4e-08 61.6 51 51.0
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.6e-07 60.5 117 29.9
Peaxi162Scf00230g00143 Petunia axillaris HOM05D003888 ORTHO05D007163 2.1e-07 60.1 62 50.0
AUR62032094 Chenopodium quinoa HOM05D000107 ORTHO05D011649 2.8e-07 59.7 99 37.4
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.8e-07 59.7 62 45.2
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-07 59.3 58 46.6
Peaxi162Scf00055g00058 Petunia axillaris HOM05D003888 ORTHO05D007163 1.1e-06 57.8 158 34.2
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 3.1e-06 56.2 70 38.6
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.0e-06 55.8 69 39.1
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-06 55.5 53 47.2
EL10Ac6g14504 Beta vulgaris HOM05D000107 ORTHO05D007163 9.0e-06 54.7 106 34.0


User provided reference genes

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