Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g027560.1 Solanum lycopersicum HOM05D000329 ORTHO05D005330 4.0e-44 181.0 90 100.0
Nitab4.5_0025717g0010 Nicotiana tabacum HOM05D000329 ORTHO05D005330 3.5e-32 141.4 89 80.9
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 1.1e-30 136.3 79 87.3
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 1.1e-30 136.3 79 87.3
CAN.G155.4 Capsicum annuum HOM05D000329 ORTHO05D005330 4.0e-28 127.9 79 81.0
Nitab4.5_0003285g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.2e-27 126.3 79 81.0
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 4.4e-27 124.4 79 77.2
Nitab4.5_0000432g0110 Nicotiana tabacum HOM05D000329 ORTHO05D005330 5.8e-27 124.0 79 79.7
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 4.1e-25 117.9 79 70.9
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 5.4e-25 117.5 79 69.6
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 5.4e-25 117.5 79 69.6
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 5.4e-25 117.5 79 69.6
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 5.4e-25 117.5 79 69.6
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 1.2e-24 116.3 79 68.4
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 1.6e-24 115.9 79 72.2
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 1.6e-24 115.9 79 72.2
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 1.6e-24 115.9 79 72.2
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 1.6e-24 115.9 79 72.2
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 1.6e-24 115.9 79 72.2
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 2.1e-24 115.5 79 70.9
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 3.5e-24 114.8 79 68.4
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 4.6e-24 114.4 79 68.4
Hma1.2p1_1512F.1_g287930 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 4.6e-24 114.4 79 69.6
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 4.6e-24 114.4 79 68.4
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 4.6e-24 114.4 79 68.4
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 6.0e-24 114.0 79 68.4
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 6.0e-24 114.0 79 68.4
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 1.0e-23 113.2 79 67.1
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 1.3e-23 112.8 79 65.8
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 1.7e-23 112.5 79 67.1
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 2.3e-23 112.1 79 67.1
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 2.3e-23 112.1 79 68.4
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 2.3e-23 112.1 79 68.4
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 2.3e-23 112.1 79 67.1
QL03p030502 Quercus lobata HOM05D000329 ORTHO05D005330 2.3e-23 112.1 79 68.4
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 2.3e-23 112.1 79 68.4
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 3.0e-23 111.7 79 67.1
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.0e-23 111.7 79 67.1
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.0e-23 111.7 79 67.1
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 3.0e-23 111.7 79 67.1
DCAR_000980 Daucus carota HOM05D000329 ORTHO05D005330 3.9e-23 111.3 79 63.3
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 3.9e-23 111.3 78 66.7
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 3.9e-23 111.3 79 65.8
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 3.9e-23 111.3 79 67.1
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 3.9e-23 111.3 79 65.8
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 3.9e-23 111.3 79 68.4
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 5.1e-23 110.9 78 69.2
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.6e-23 110.5 79 65.8
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 6.6e-23 110.5 79 64.6
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 8.6e-23 110.2 79 65.8
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 8.6e-23 110.2 79 64.6
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 8.6e-23 110.2 79 65.8
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 8.6e-23 110.2 79 68.4
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 1.1e-22 109.8 79 64.6
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 1.1e-22 109.8 79 64.6
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.1e-22 109.8 79 65.8
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 1.1e-22 109.8 79 67.1
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 1.1e-22 109.8 79 68.4
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 1.9e-22 109.0 83 62.7
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 1.9e-22 109.0 83 62.7
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 1.9e-22 109.0 79 64.6
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 2.5e-22 108.6 79 65.8
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 3.3e-22 108.2 80 60.0
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 7.3e-22 107.1 79 63.3
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 9.5e-22 106.7 78 65.4
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 1.2e-21 106.3 79 64.6
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 1.2e-21 106.3 79 62.0
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 1.6e-21 105.9 79 63.3
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 6.2e-21 104.0 79 64.6
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 8.1e-21 103.6 79 64.6
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 1.1e-20 103.2 79 62.0
ClCG06G009520 Citrullus lanatus HOM05D000329 ORTHO05D005330 1.8e-20 102.4 79 64.6
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 1.8e-20 102.4 79 63.3
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 2.4e-20 102.1 79 64.6
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 3.1e-20 101.7 79 62.0
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 3.1e-20 101.7 79 63.3
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 4.0e-20 101.3 79 62.0
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 5.2e-20 100.9 78 65.4
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 6.8e-20 100.5 79 62.0
SalBow6G5354 Salvia bowleyana HOM05D000329 ORTHO05D005330 6.8e-20 100.5 79 60.8
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 8.9e-20 100.1 79 63.3
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 2.0e-19 99.0 79 57.0
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 2.0e-19 99.0 79 58.2
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 2.6e-19 98.6 79 54.4
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 2.6e-19 98.6 79 58.2
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 2.6e-19 98.6 118 48.3
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 3.4e-19 98.2 79 62.0
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 2.9e-18 95.1 79 60.8
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 3.8e-18 94.7 79 54.4
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 8.4e-18 93.6 79 51.9
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.9e-17 92.4 79 60.8
CDE08G1568 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 1.9e-17 92.4 79 54.4
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 1.9e-17 92.4 79 53.2
Hma1.2p1_1512F.1_g287950 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 3.2e-17 91.7 82 57.3
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 4.2e-17 91.3 79 49.4
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 5.4e-17 90.9 79 51.9
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 1.6e-16 89.4 78 53.8
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.7e-15 85.9 79 48.1
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 4.3e-14 81.3 79 45.6
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 4.3e-14 81.3 79 45.6
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 7.3e-14 80.5 79 48.1
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 2.1e-13 79.0 79 43.0
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.8e-12 75.9 79 50.6
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.2e-11 73.2 79 49.4
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 2.2e-10 68.9 57 57.9
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 4.2e-09 64.7 41 70.7
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 5.4e-09 64.3 44 63.6
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 9.3e-09 63.5 41 73.2
Haze_04432 Corylus avellana HOM05D000329 ORTHO05D005330 4.6e-08 61.2 41 65.9
Rhsim10G0071600 Rhododendron simsii HOM05D000329 ORTHO05D005330 3.0e-07 58.5 45 60.0
Cfa012903 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.5e-06 56.2 36 72.2
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 1.5e-06 56.2 38 68.4


User provided reference genes

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