Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g021330.1 Solanum lycopersicum HOM05D002957 ORTHO05D007941 1.9e-26 121.7 59 100.0
Sopen12g011690 Solanum pennellii HOM05D002957 ORTHO05D007941 3.3e-23 110.9 57 94.7
CAN.G59.20 Capsicum annuum HOM05D002957 ORTHO05D007941 6.3e-22 106.7 57 91.2
Nitab4.5_0001377g0020 Nicotiana tabacum HOM05D002957 ORTHO05D007941 9.0e-21 102.8 57 86.0
Nitab4.5_0000025g0240 Nicotiana tabacum HOM05D002957 ORTHO05D007941 2.6e-20 101.3 57 86.0
Oeu063270.2 Olea europaea HOM05D002957 ORTHO05D007941 1.1e-18 95.9 57 82.5
TAR622G0090 Trochodendron aralioides HOM05D002957 ORTHO05D007941 1.1e-18 95.9 57 84.2
PGR083G0505 Punica granatum HOM05D002957 ORTHO05D007941 3.2e-18 94.4 57 78.9
CSS0023443 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D007941 4.2e-18 94.0 57 80.7
SalBow5G1405 Salvia bowleyana HOM05D002957 ORTHO05D007941 4.2e-18 94.0 57 78.9
Nn3g16664 Nelumbo nucifera HOM05D002957 ORTHO05D007941 5.5e-18 93.6 57 80.7
Actinidia36761 Actinidia chinensis HOM05D002957 ORTHO05D007941 9.4e-18 92.8 57 80.7
Potri.015G086100 Populus trichocarpa HOM05D002957 ORTHO05D007941 1.2e-17 92.4 57 78.9
CSS0001501 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D007941 1.6e-17 92.0 57 78.9
Lj1g0012275 Lotus japonicus HOM05D002957 ORTHO05D007941 1.6e-17 92.0 57 73.7
Lj1g0016898 Lotus japonicus HOM05D002957 ORTHO05D007941 1.6e-17 92.0 57 73.7
Peaxi162Scf00801g00733 Petunia axillaris HOM05D002957 ORTHO05D007941 1.6e-17 92.0 57 80.7
TPR.G35599 Trifolium pratense HOM05D002957 ORTHO05D007941 2.1e-17 91.7 57 75.4
Glyma.06G175800 Glycine max HOM05D002957 ORTHO05D007941 4.6e-17 90.5 57 71.9
Sabra15G0109000 Salix brachista HOM05D002957 ORTHO05D007941 6.1e-17 90.1 57 75.4
TWI39G0012 Tripterygium wilfordii HOM05D002957 ORTHO05D007941 7.9e-17 89.7 57 75.4
Cfa019259 Carpinus fangiana HOM05D002957 ORTHO05D007941 1.0e-16 89.4 57 75.4
Medtr3g075540 Medicago truncatula HOM05D002957 ORTHO05D007941 1.0e-16 89.4 57 71.9
GSVIVG01007604001 Vitis vinifera HOM05D002957 ORTHO05D007941 1.0e-16 89.4 57 75.4
SGA_v2.0_scaffold90G27815 Striga asiatica HOM05D002957 ORTHO05D007941 1.4e-16 89.0 57 75.4
VMungo1309G1657 Vigna mungo HOM05D002957 ORTHO05D007941 1.4e-16 89.0 57 70.2
Cc04_g11180 Coffea canephora HOM05D002957 ORTHO05D007941 1.8e-16 88.6 57 70.2
Haze_07617 Corylus avellana HOM05D002957 ORTHO05D007941 2.3e-16 88.2 57 73.7
Sp7g22730 Schrenkiella parvula HOM05D002957 ORTHO05D007941 2.3e-16 88.2 57 70.2
Hund05604 Selenicereus undatus HOM05D002957 ORTHO05D007941 2.3e-16 88.2 57 75.4
Aa31LG7G11100 Aethionema arabicum HOM05D002957 ORTHO05D007941 3.0e-16 87.8 57 70.2
arahy.Tifrunner.gnm1.ann1.0G1QRI Arachis hypogaea HOM05D002957 ORTHO05D007941 3.0e-16 87.8 57 68.4
arahy.Tifrunner.gnm1.ann1.DF1MTK Arachis hypogaea HOM05D002957 ORTHO05D007941 3.0e-16 87.8 57 68.4
COL.COLO4_37865 Corchorus olitorius HOM05D002957 ORTHO05D007941 3.0e-16 87.8 57 71.9
CARHR232120 Cardamine hirsuta HOM05D002957 ORTHO05D007941 3.9e-16 87.4 57 68.4
Phvul.009G171900 Phaseolus vulgaris HOM05D002957 ORTHO05D007941 3.9e-16 87.4 57 70.2
Thhalv10025885m.g Eutrema salsugineum HOM05D002957 ORTHO05D007941 5.1e-16 87.0 57 68.4
Atru.chr9.2618 Acer truncatum HOM05D002957 ORTHO05D007941 6.7e-16 86.7 57 70.2
EL10Ac7g18022 Beta vulgaris HOM05D002957 ORTHO05D007941 6.7e-16 86.7 57 70.2
AT4G24750 Arabidopsis thaliana HOM05D002957 ORTHO05D007941 8.8e-16 86.3 57 68.4
CiPaw.11G016500 Carya illinoinensis HOM05D002957 ORTHO05D007941 8.8e-16 86.3 57 73.7
Carub.0007s1631 Capsella rubella HOM05D002957 ORTHO05D007941 1.1e-15 85.9 57 66.7
Ciclev10021427m.g Citrus clementina HOM05D002957 ORTHO05D007941 1.1e-15 85.9 57 70.2
Duzib084G0342 Durio zibethinus HOM05D002957 ORTHO05D007941 1.1e-15 85.9 57 70.2
ClCG06G017470 Citrullus lanatus HOM05D002957 ORTHO05D007941 1.5e-15 85.5 57 70.2
Hma1.2p1_1092F.1_g255880 Hydrangea macrophylla HOM05D002957 ORTHO05D007941 1.5e-15 85.5 56 71.4
MD06G1224500 Malus domestica HOM05D002957 ORTHO05D007941 1.5e-15 85.5 57 70.2
MBI10_g44128_MAGBIO Magnolia biondii HOM05D002957 ORTHO05D007941 1.9e-15 85.1 54 74.1
Thecc.03G117300 Theobroma cacao HOM05D002957 ORTHO05D007941 1.9e-15 85.1 57 70.2
CsaV3_1G000990 Cucumis sativus L. HOM05D002957 ORTHO05D007941 2.5e-15 84.7 57 68.4
Gohir.D12G188700 Gossypium hirsutum HOM05D002957 ORTHO05D007941 2.5e-15 84.7 57 70.2
Gorai.008G202600 Gossypium raimondii HOM05D002957 ORTHO05D007941 2.5e-15 84.7 57 70.2
CANSAT80G1905 Cannabis sativa HOM05D002957 ORTHO05D007941 3.3e-15 84.3 57 71.9
AUR62001223 Chenopodium quinoa HOM05D002957 ORTHO05D007941 3.3e-15 84.3 55 72.7
AUR62022097 Chenopodium quinoa HOM05D002957 ORTHO05D007941 3.3e-15 84.3 55 72.7
Lj5A132G82 Lonicera japonica HOM05D002957 ORTHO05D007941 4.3e-15 84.0 57 68.4
vmacro22887 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 4.3e-15 84.0 52 76.9
vmacro23142 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 4.3e-15 84.0 52 76.9
Dinv38506 Davidia involucrata HOM05D002957 ORTHO05D007941 5.7e-15 83.6 51 78.4
FAN18G4082 Fragaria x ananassa HOM05D000025 ORTHO05D007941 5.7e-15 83.6 57 70.2
Lalb_Chr11g0069861 Lupinus albus HOM05D002957 ORTHO05D007941 5.7e-15 83.6 57 64.9
QL03p060389 Quercus lobata HOM05D002957 ORTHO05D007941 5.7e-15 83.6 55 74.5
AL7G28440 Arabidopsis lyrata HOM05D002957 ORTHO05D007941 7.4e-15 83.2 57 66.7
BcaC09g50835 Brassica carinata HOM05D002957 ORTHO05D007941 7.4e-15 83.2 52 71.2
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 7.4e-15 83.2 54 68.5
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 7.4e-15 83.2 54 68.5
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 7.4e-15 83.2 54 68.5
Cpa.g.sc159.6 Carica papaya HOM05D002957 ORTHO05D007941 7.4e-15 83.2 54 72.2
MELO3C026250.2 Cucumis melo HOM05D002957 ORTHO05D007941 7.4e-15 83.2 57 66.7
ECA247G2183 Erigeron canadensis HOM05D002957 ORTHO05D007941 7.4e-15 83.2 54 72.2
FvH4_5g06601 Fragaria vesca HOM05D002957 ORTHO05D007941 7.4e-15 83.2 57 70.2
FAN08G0527 Fragaria x ananassa HOM05D002957 ORTHO05D007941 7.4e-15 83.2 57 70.2
RcHm_v2.0_Chr7g0192141 Rosa chinensis HOM05D002957 ORTHO05D007941 7.4e-15 83.2 57 70.2
CiPaw.11G016200 Carya illinoinensis HOM05D002957 ORTHO05D007941 9.7e-15 82.8 52 76.9
DCAR_026193 Daucus carota HOM05D002957 ORTHO05D007941 9.7e-15 82.8 56 67.9
Rhsim12G0169500 Rhododendron simsii HOM05D002957 ORTHO05D007941 9.7e-15 82.8 57 70.2
THA.LOC104809647 Tarenaya hassleriana HOM05D002957 ORTHO05D007941 9.7e-15 82.8 57 68.4
Lsat_1_v5_gn_1_28561 Lactuca sativa HOM05D002957 ORTHO05D007941 1.7e-14 82.0 57 66.7
Sc04g0001210 Simmondsia chinensis HOM05D002957 ORTHO05D007941 1.7e-14 82.0 57 66.7
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 4.8e-14 80.5 53 67.9
DCAR_011893 Daucus carota HOM05D002957 ORTHO05D007941 4.8e-14 80.5 55 69.1
Migut.O00181 Erythranthe guttata HOM05D002957 ORTHO05D007941 6.3e-14 80.1 50 70.0
Eucgr.B00189 Eucalyptus grandis HOM05D002957 ORTHO05D007941 6.3e-14 80.1 66 63.6
HanXRQChr02g0035391 Helianthus annuus HOM05D002957 ORTHO05D007941 1.1e-13 79.3 57 63.2
Aqoxy5G03698 Aquilegia oxysepala HOM05D002957 ORTHO05D007941 6.9e-13 76.6 47 76.6
Sed0027100 Sechium edule HOM05D002957 ORTHO05D007941 2.6e-12 74.7 57 59.6
PSO210G3123 Papaver somniferum HOM05D002957 ORTHO05D007941 4.5e-12 73.9 55 61.8
PSO063G7275 Papaver somniferum HOM05D002957 ORTHO05D007941 7.7e-12 73.2 55 60.0
unitig_8.g3070 Utricularia gibba HOM05D002957 ORTHO05D007941 7.7e-12 73.2 57 61.4
CDE08G1276 Ceratophyllum demersum HOM05D002957 ORTHO05D007941 1.4e-10 68.9 53 58.5
Os02g0596000 Oryza sativa ssp. japonica HOM05D002957 ORTHO05D007941 2.5e-10 68.2 57 57.9
AagrBONN_evm.TU.Sc2ySwM_344.1972 Anthoceros agrestis HOM05D002957 ORTHO05D007941 4.2e-10 67.4 53 62.3
Zm00001eb246160 Zea mays HOM05D002957 ORTHO05D007941 1.2e-09 65.9 54 55.6
Mapoly0042s0113 Marchantia polymorpha HOM05D002957 ORTHO05D007941 1.4e-08 62.4 54 53.7
SMO364G0570 Selaginella moellendorffii HOM05D002957 ORTHO05D007941 2.3e-08 61.6 52 59.6
MD14G1168500 Malus domestica HOM05D002957 ORTHO05D007941 5.1e-08 60.5 42 69.0
SEGI_01299 Sequoiadendron giganteum HOM05D002957 ORTHO05D007941 8.8e-08 59.7 46 63.0
CBR_g34898 Chara braunii HOM05D002957 ORTHO05D007941 2.2e-06 55.1 51 52.9


User provided reference genes

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