Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g021310.3 Solanum lycopersicum HOM05D005766 ORTHO05D007002 3.5e-109 398.3 197 100.0
Sopen12g011330 Solanum pennellii HOM05D005766 ORTHO05D007002 3.0e-105 385.2 197 97.0
PGSC0003DMG400006615 Solanum tuberosum HOM05D005766 ORTHO05D007002 1.7e-103 379.4 197 94.9
Nitab4.5_0001504g0110 Nicotiana tabacum HOM05D005766 ORTHO05D007002 3.3e-83 312.0 186 81.7
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 3.9e-68 261.9 176 71.0
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 2.5e-67 259.2 183 68.3
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 1.3e-66 256.9 168 72.6
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 2.1e-66 256.1 180 68.9
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 6.2e-66 254.6 174 70.1
QL11p056568 Quercus lobata HOM05D005766 ORTHO05D007002 4.0e-65 251.9 182 66.5
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 1.2e-64 250.4 173 67.1
Atru.chr1.316 Acer truncatum HOM05D005766 ORTHO05D007002 2.0e-64 249.6 174 67.8
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 5.8e-64 248.1 174 66.7
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 1.3e-63 246.9 168 67.9
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 2.2e-63 246.1 173 67.1
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 3.8e-63 245.4 173 67.1
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 5.4e-62 241.5 173 64.7
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 7.1e-62 241.1 174 64.4
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.2e-61 240.4 169 66.9
RcHm_v2.0_Chr1g0379651 Rosa chinensis HOM05D005766 ORTHO05D007002 1.2e-61 240.4 200 57.5
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 3.5e-61 238.8 173 64.2
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 6.0e-61 238.0 173 64.7
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 1.0e-60 237.3 184 60.3
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 1.7e-60 236.5 170 62.9
HanXRQChr14g0440221 Helianthus annuus HOM05D005766 ORTHO05D007002 1.7e-60 236.5 173 64.7
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 3.0e-60 235.7 163 69.3
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 3.0e-60 235.7 174 64.9
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 3.9e-60 235.3 173 63.0
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 5.1e-60 235.0 173 65.9
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 1.5e-59 233.4 173 61.8
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 3.3e-59 232.3 168 63.7
Sc13g0009390 Simmondsia chinensis HOM05D005766 ORTHO05D007002 4.3e-59 231.9 173 64.2
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 4.3e-59 231.9 179 60.9
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 5.6e-59 231.5 166 66.3
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 7.3e-59 231.1 173 60.7
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 9.6e-59 230.7 169 62.7
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 1.3e-58 230.3 164 67.7
Psat6g194960 Pisum sativum HOM05D000038 ORTHO05D007763 2.1e-58 229.6 199 56.8
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 2.8e-58 229.2 173 61.8
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 4.8e-58 228.4 173 63.0
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 6.2e-58 228.0 173 63.0
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 6.2e-58 228.0 167 62.3
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 1.1e-57 227.3 173 60.7
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 1.8e-57 226.5 173 63.0
CAN.G71.5 Capsicum annuum HOM05D005766 ORTHO05D007002 2.4e-57 226.1 129 85.3
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 2.4e-57 226.1 173 60.7
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 6.9e-57 224.6 183 60.1
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 6.9e-57 224.6 183 60.1
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 9.0e-57 224.2 173 61.8
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 1.5e-56 223.4 173 62.4
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 2.0e-56 223.0 177 58.2
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 3.4e-56 222.2 169 62.7
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 3.4e-56 222.2 173 61.8
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 4.5e-56 221.9 170 61.2
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 9.9e-56 220.7 174 59.2
Lalb_Chr06g0161401 Lupinus albus HOM05D005766 ORTHO05D007002 9.9e-56 220.7 181 57.5
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 9.9e-56 220.7 178 60.1
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 1.7e-55 219.9 173 61.3
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 2.2e-55 219.5 169 59.2
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 4.9e-55 218.4 165 61.2
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 8.4e-55 217.6 159 62.3
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 8.4e-55 217.6 159 62.3
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 8.4e-55 217.6 159 62.3
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 1.1e-54 217.2 173 57.8
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 1.4e-54 216.9 168 60.1
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.4e-54 216.1 159 62.3
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 4.2e-54 215.3 173 57.8
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 5.4e-54 214.9 171 56.1
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 5.4e-54 214.9 159 61.6
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 5.4e-54 214.9 159 61.6
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 2.1e-53 213.0 172 57.0
Zm00001eb221900 Zea mays HOM05D005766 ORTHO05D007002 3.9e-52 208.8 171 59.1
Medtr1g099390 Medicago truncatula HOM05D005766 ORTHO05D007002 6.7e-52 208.0 180 56.1
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 1.3e-50 203.8 174 58.0
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 7.9e-45 184.5 147 59.9
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 2.3e-44 183.0 157 59.2
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 9.6e-43 177.6 181 47.5
Glyma.18G131400 Glycine max HOM05D005766 ORTHO05D007002 3.7e-42 175.6 177 49.7
QL09p011987 Quercus lobata HOM05D005766 ORTHO05D007002 1.1e-41 174.1 173 50.9
AUR62021076 Chenopodium quinoa HOM05D005766 ORTHO05D007002 2.6e-40 169.5 132 62.1
AUR62031455 Chenopodium quinoa HOM05D000038 ORTHO05D007763 3.4e-40 169.1 168 54.8
Os05g0299300 Oryza sativa ssp. japonica HOM05D005766 ORTHO05D007002 1.6e-37 160.2 130 57.7
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 1.9e-35 153.3 158 43.7
arahy.Tifrunner.gnm1.ann1.DV56VC Arachis hypogaea HOM05D005766 ORTHO05D007002 8.5e-31 137.9 136 47.1
Actinidia08606 Actinidia chinensis HOM05D005766 ORTHO05D007002 7.2e-30 134.8 89 62.9
Duzib084G0599 Durio zibethinus HOM05D005766 ORTHO05D007002 2.1e-29 133.3 114 61.4
Cre01.g002700 Chlamydomonas reinhardtii HOM05D005766 ORTHO05D007002 3.7e-26 122.5 168 36.3
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 2.1e-21 106.7 173 35.3
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 7.9e-21 104.8 81 54.3
arahy.Tifrunner.gnm1.ann1.XWQU4Z Arachis hypogaea HOM05D005766 ORTHO05D007002 2.2e-18 96.7 67 61.2
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 5.0e-15 85.5 56 60.7
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 8.5e-15 84.7 60 55.0
TPR.G27363 Trifolium pratense HOM05D005766 ORTHO05D007002 3.2e-14 82.8 58 58.6
arahy.Tifrunner.gnm1.ann1.118EZC Arachis hypogaea HOM05D005766 ORTHO05D007002 1.2e-13 80.9 56 64.3
Oeu049881.1 Olea europaea HOM05D005766 ORTHO05D007002 3.1e-09 66.2 57 57.9
arahy.Tifrunner.gnm1.ann1.AW6XP7 Arachis hypogaea HOM05D005766 ORTHO05D007002 7.7e-08 61.6 51 41.2
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 1.0e-07 61.2 164 25.6
Glyma.08G028700 Glycine max HOM05D005766 ORTHO05D007002 1.3e-07 60.8 41 68.3
Oeu044897.1 Olea europaea HOM05D005766 ORTHO05D007002 5.0e-07 58.9 87 37.9
Oeu016993.1 Olea europaea HOM05D005766 ORTHO05D007002 6.5e-07 58.5 87 37.9
Oeu023563.1 Olea europaea HOM05D005766 ORTHO05D007002 1.1e-06 57.8 87 37.9


User provided reference genes

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