Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g021210.1 Solanum lycopersicum HOM05D014615 ORTHO05D013925 2.4e-122 442.2 223 100.0
Solyc12g021200.2 Solanum lycopersicum HOM05D014615 ORTHO05D013925 2.1e-110 402.5 223 91.5
Sopen12g011130 Solanum pennellii HOM05D014615 ORTHO05D000002 1.8e-82 309.7 173 91.9
PGSC0003DMG400042992 Solanum tuberosum HOM05D014615 ORTHO05D013925 6.3e-75 284.6 162 88.3
PGSC0003DMG400047289 Solanum tuberosum HOM05D014615 ORTHO05D013925 9.8e-68 260.8 190 73.7
Nitab4.5_0000073g0090 Nicotiana tabacum HOM05D014615 ORTHO05D013925 1.7e-48 196.8 242 48.3
Nitab4.5_0001866g0040 Nicotiana tabacum HOM05D014615 ORTHO05D013925 2.6e-44 183.0 242 47.5
PGSC0003DMG400039790 Solanum tuberosum HOM05D006181 ORTHO05D013925 3.3e-31 139.4 103 73.8
Solyc12g021193.1 Solanum lycopersicum HOM05D014615 ORTHO05D013925 1.6e-30 137.1 107 72.0
Solyc12g021197.1 Solanum lycopersicum HOM05D014615 ORTHO05D013925 8.1e-14 81.6 43 83.7
Solyc10g055035.1 Solanum lycopersicum HOM05D014615 ORTHO05D013925 6.5e-11 72.0 80 48.8
Dinv25572 Davidia involucrata HOM05D001069 ORTHO05D013925 3.0e-08 63.2 231 29.0
Thecc.09G079900 Theobroma cacao HOM05D001069 ORTHO05D001549 8.7e-08 61.6 108 30.6
Atru.chr7.1675 Acer truncatum HOM05D001069 ORTHO05D001549 1.1e-07 61.2 79 34.2
Os03g0798200 Oryza sativa ssp. japonica HOM05D001069 ORTHO05D001549 2.5e-07 60.1 89 34.8
Actinidia30205 Actinidia chinensis HOM05D001069 ORTHO05D013925 5.7e-07 58.9 144 27.8
HanXRQChr04g0113611 Helianthus annuus HOM05D001069 ORTHO05D001549 9.6e-07 58.2 86 31.4
Dinv18692 Davidia involucrata HOM05D001069 ORTHO05D003393 2.8e-06 56.6 84 29.8
Glyma.10G180300 Glycine max HOM05D001069 ORTHO05D001549 8.2e-06 55.1 91 30.8


User provided reference genes

Program Settings