Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g021200.2 Solanum lycopersicum HOM05D014615 ORTHO05D013925 1.6e-123 446.0 223 100.0
Solyc12g021210.1 Solanum lycopersicum HOM05D014615 ORTHO05D013925 3.2e-111 405.2 223 91.5
Sopen12g011130 Solanum pennellii HOM05D014615 ORTHO05D000002 1.4e-85 320.1 173 93.6
PGSC0003DMG400042992 Solanum tuberosum HOM05D014615 ORTHO05D013925 4.4e-76 288.5 162 88.9
PGSC0003DMG400047289 Solanum tuberosum HOM05D014615 ORTHO05D013925 1.2e-68 263.8 182 76.9
Nitab4.5_0000073g0090 Nicotiana tabacum HOM05D014615 ORTHO05D013925 1.3e-51 207.2 221 53.4
Nitab4.5_0001866g0040 Nicotiana tabacum HOM05D014615 ORTHO05D013925 3.3e-47 192.6 221 52.5
Solyc12g021193.1 Solanum lycopersicum HOM05D014615 ORTHO05D013925 3.6e-30 136.0 107 71.0
PGSC0003DMG400039790 Solanum tuberosum HOM05D006181 ORTHO05D013925 8.1e-30 134.8 103 72.8
Solyc12g021197.1 Solanum lycopersicum HOM05D014615 ORTHO05D013925 4.3e-15 85.9 42 88.1
Solyc10g055035.1 Solanum lycopersicum HOM05D014615 ORTHO05D013925 1.8e-13 80.5 80 52.5
Dinv25572 Davidia involucrata HOM05D001069 ORTHO05D013925 1.0e-11 74.7 231 29.9
Atru.chr7.1675 Acer truncatum HOM05D001069 ORTHO05D001549 4.9e-11 72.4 115 33.0
Os03g0798200 Oryza sativa ssp. japonica HOM05D001069 ORTHO05D001549 1.8e-08 63.9 89 36.0
Thecc.09G079900 Theobroma cacao HOM05D001069 ORTHO05D001549 1.8e-08 63.9 108 30.6
Actinidia30205 Actinidia chinensis HOM05D001069 ORTHO05D013925 3.9e-08 62.8 96 32.3
Psat5g056600 Pisum sativum HOM05D029048 ORTHO05D003393 6.7e-08 62.0 87 33.3
Dinv18692 Davidia involucrata HOM05D001069 ORTHO05D003393 5.7e-07 58.9 84 31.0
PSO210G6554 Papaver somniferum HOM05D001069 ORTHO05D001549 5.7e-07 58.9 119 30.3
Duzib187G1995 Durio zibethinus HOM05D001069 ORTHO05D003393 7.4e-07 58.5 84 28.6
Lsat_1_v5_gn_5_186681 Lactuca sativa HOM05D001069 ORTHO05D001549 9.6e-07 58.2 109 26.6
SEGI_21998 Sequoiadendron giganteum HOM05D001069 ORTHO05D003393 1.6e-06 57.4 101 27.7
HPP92_017519 Vanilla planifolia HOM05D001069 ORTHO05D001549 1.6e-06 57.4 114 28.1
SEGI_20529 Sequoiadendron giganteum HOM05D001069 ORTHO05D003393 2.1e-06 57.0 93 29.0
Aqoxy7G04121 Aquilegia oxysepala HOM05D001069 ORTHO05D001549 2.8e-06 56.6 91 30.8
Glyma.10G180300 Glycine max HOM05D001069 ORTHO05D001549 2.8e-06 56.6 91 31.9
Gohir.D10G110300 Gossypium hirsutum HOM05D001069 ORTHO05D003393 2.8e-06 56.6 84 27.4
Gorai.011G121600 Gossypium raimondii HOM05D001069 ORTHO05D003393 2.8e-06 56.6 84 27.4
Aqoxy5G03202 Aquilegia oxysepala HOM05D003399 ORTHO05D003393 3.7e-06 56.2 90 33.3
Carub.0001s0609 Capsella rubella HOM05D001069 ORTHO05D001549 4.8e-06 55.8 147 26.5


User provided reference genes

Program Settings