Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 1.2e-252 875.9 425 100.0
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 1.6e-252 875.5 425 99.8
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 3.2e-229 798.1 415 93.3
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 3.5e-223 778.1 425 88.5
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 2.9e-222 775.0 425 88.7
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 7.5e-218 760.4 425 82.8
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 3.9e-214 748.0 425 82.6
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 1.2e-212 743.0 425 82.1
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 1.4e-211 739.6 424 80.9
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 4.4e-210 734.6 424 80.4
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 7.5e-210 733.8 413 82.1
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 2.2e-209 732.3 425 77.6
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 2.9e-209 731.9 424 80.4
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 1.1e-208 729.9 450 76.4
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.9e-208 729.2 425 80.0
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.4e-208 728.8 424 80.0
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 9.2e-208 726.9 425 78.4
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 4.6e-207 724.5 425 79.3
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 3.0e-206 721.8 425 78.8
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 3.0e-206 721.8 425 78.6
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.1e-205 719.9 427 78.0
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 1.5e-205 719.5 425 78.1
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 1.5e-205 719.5 425 78.4
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 7.3e-205 717.2 408 80.4
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 2.8e-204 715.3 410 79.8
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 3.6e-204 714.9 427 77.3
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 4.7e-204 714.5 414 79.5
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 6.8e-203 710.7 424 77.6
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 8.9e-203 710.3 421 78.9
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 1.7e-201 706.1 413 80.1
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 3.7e-201 704.9 425 76.0
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 3.7e-201 704.9 425 75.8
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 8.3e-201 703.7 414 77.1
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.4e-200 703.0 422 77.0
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.9e-200 702.6 425 76.9
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 3.2e-200 701.8 413 79.2
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 1.2e-199 699.9 424 75.9
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 6.0e-199 697.6 425 75.8
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.0e-198 696.8 458 76.4
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 3.9e-198 694.9 420 76.2
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 3.9e-198 694.9 425 74.8
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.1e-197 693.3 425 74.8
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 2.5e-197 692.2 420 75.7
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 4.3e-197 691.4 413 78.5
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 2.8e-196 688.7 425 74.4
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.1e-195 686.8 404 77.5
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 1.1e-195 686.8 425 75.8
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 5.2e-195 684.5 425 72.9
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 5.2e-195 684.5 425 74.6
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 8.9e-195 683.7 425 73.6
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 1.2e-194 683.3 425 73.6
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 1.5e-194 682.9 425 75.3
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 1.5e-194 682.9 425 74.8
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 5.8e-194 681.0 425 72.9
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 5.8e-194 681.0 425 73.2
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 9.9e-194 680.2 428 75.0
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 1.7e-193 679.5 425 73.2
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 1.7e-193 679.5 422 73.2
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 1.7e-193 679.5 425 75.8
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 2.2e-193 679.1 425 73.2
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 2.2e-193 679.1 425 73.2
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 2.2e-193 679.1 405 76.3
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 2.9e-193 678.7 426 73.5
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 8.4e-193 677.2 396 77.3
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 1.9e-192 676.0 425 72.9
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 4.1e-192 674.9 403 78.7
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 2.1e-191 672.5 426 73.0
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 3.5e-191 671.8 426 72.3
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 6.0e-191 671.0 423 75.2
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 1.3e-190 669.8 413 75.3
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 4.3e-189 664.8 402 76.4
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.1e-187 660.2 425 72.9
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.5e-186 656.4 420 74.0
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 1.3e-185 653.3 426 71.8
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 3.8e-185 651.7 425 69.6
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 4.9e-185 651.4 541 60.6
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 1.9e-184 649.4 425 69.9
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 1.6e-183 646.4 426 70.9
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.3e-182 643.3 409 72.1
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 6.6e-182 641.0 413 74.1
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 2.0e-178 629.4 437 67.7
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 2.7e-175 619.0 470 63.8
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 2.1e-172 609.4 404 71.3
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 8.1e-172 607.4 414 68.8
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 9.3e-168 594.0 423 63.4
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 3.1e-163 578.9 423 65.7
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 1.1e-160 570.5 386 68.7
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 7.9e-159 564.3 415 64.8
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 3.4e-154 548.9 371 70.4
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 5.0e-153 545.0 314 78.7
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 2.5e-152 542.7 314 78.3
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 8.8e-150 534.3 361 68.7
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 6.5e-145 518.1 387 67.2
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 2.6e-141 506.1 425 61.2
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 4.4e-101 372.5 214 81.8
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 1.6e-95 354.0 206 82.5
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 2.3e-94 350.1 204 77.9
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 5.2e-94 349.0 348 44.0
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 4.0e-86 322.8 349 43.6
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 1.5e-85 320.9 348 44.8
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 3.0e-73 280.0 365 35.9
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 4.5e-61 239.6 280 41.4
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 2.1e-47 194.1 106 81.1
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.1e-40 171.8 103 73.8
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 2.4e-38 164.1 106 70.8
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 2.4e-38 164.1 106 70.8
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 2.0e-37 161.0 103 70.9
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.1e-35 155.2 84 79.8
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 4.3e-32 143.3 139 56.8
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.6e-13 81.6 50 72.0
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.0e-13 81.3 49 71.4
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 5.9e-13 79.7 49 71.4
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.6e-10 71.6 48 66.7
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 1.6e-10 71.6 45 73.3
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 1.2e-08 65.5 63 50.8


User provided reference genes

Program Settings