Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g013530.2 Solanum lycopersicum HOM05D008666 ORTHO05D009871 1.8e-111 406.0 208 100.0
Sopen12g006880 Solanum pennellii HOM05D008666 ORTHO05D009871 8.5e-106 387.1 208 95.7
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 9.4e-89 330.5 204 81.9
Nitab4.5_0000639g0010 Nicotiana tabacum HOM05D008666 ORTHO05D009871 3.3e-65 252.3 207 63.8
Peaxi162Scf00000g00503 Petunia axillaris HOM05D008666 ORTHO05D009871 2.3e-55 219.5 204 57.4
PGSC0003DMG400008566 Solanum tuberosum HOM05D008666 ORTHO05D009871 7.8e-43 177.9 199 49.7
Sopen12g006860 Solanum pennellii HOM05D008666 ORTHO05D009871 5.2e-39 165.2 199 48.2
Sopen12g006870 Solanum pennellii HOM05D008666 ORTHO05D009871 5.8e-38 161.8 208 48.6
Solyc12g013520.3 Solanum lycopersicum HOM05D008666 ORTHO05D009871 1.7e-37 160.2 199 47.2
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 5.1e-34 148.7 198 43.9
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 4.0e-31 139.0 196 42.3
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 4.0e-31 139.0 196 41.3
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 9.9e-30 134.4 205 44.9
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 1.6e-27 127.1 202 38.1
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 1.6e-27 127.1 208 41.8
Nitab4.5_0005141g0060 Nicotiana tabacum HOM05D008666 ORTHO05D009871 5.1e-26 122.1 123 56.1
Nitab4.5_0000662g0020 Nicotiana tabacum HOM05D008666 ORTHO05D009871 4.3e-25 119.0 102 63.7
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 6.4e-21 105.1 196 36.7
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 8.4e-21 104.8 196 36.7
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 7.8e-19 98.2 200 35.0
MSTRG.14377 Avicennia marina HOM05D008666 ORTHO05D009871 1.3e-18 97.4 196 35.2
Oeu030433.2 Olea europaea HOM05D008666 ORTHO05D009871 2.5e-17 93.2 196 33.2
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 2.4e-15 86.7 202 35.1
HanXRQChr03g0075931 Helianthus annuus HOM05D008666 ORTHO05D009871 4.0e-15 85.9 196 33.2
EL10Ac5g12049 Beta vulgaris HOM05D014664 ORTHO05D009871 9.0e-15 84.7 209 30.1
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.5e-14 84.0 197 31.5
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 1.3e-13 80.9 196 32.7
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 2.2e-13 80.1 215 32.6
CAN.G1320.12 Capsicum annuum HOM05D008666 ORTHO05D009871 2.9e-13 79.7 96 44.8
Rhsim04G0017800 Rhododendron simsii HOM05D008666 ORTHO05D009871 8.4e-13 78.2 209 30.1
AUR62026950 Chenopodium quinoa HOM05D014664 ORTHO05D009871 1.9e-12 77.0 206 25.2
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 4.2e-12 75.9 199 31.7
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 1.2e-11 74.3 203 32.0
Ah.10g037450 Amaranthus hybridus HOM05D014664 ORTHO05D009871 2.7e-11 73.2 201 24.9
AUR62043278 Chenopodium quinoa HOM05D014664 ORTHO05D009871 1.0e-10 71.2 197 26.9
TAR599G0004 Trochodendron aralioides HOM05D008666 ORTHO05D009871 1.0e-10 71.2 91 42.9
Lsat_1_v5_gn_9_95760 Lactuca sativa HOM05D008666 ORTHO05D009871 6.7e-10 68.6 122 38.5
MBI18_g11119_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 8.7e-10 68.2 88 39.8
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 2.5e-09 66.6 248 27.8
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 2.5e-09 66.6 248 27.8
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 3.7e-08 62.8 91 42.9
Sc11g0008030 Simmondsia chinensis HOM05D014664 ORTHO05D009871 4.8e-08 62.4 208 26.0
Rhsim04G0017700 Rhododendron simsii HOM05D008666 ORTHO05D009871 6.2e-08 62.0 111 34.2
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 8.1e-08 61.6 97 37.1
Cpa.g.sc80.110 Carica papaya HOM05D048510 ORTHO05D009871 8.1e-08 61.6 226 27.4
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.1e-07 61.2 91 37.4
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.1e-07 61.2 70 47.1
ECA240G0223 Erigeron canadensis HOM05D008666 ORTHO05D009871 1.4e-07 60.8 115 36.5
Hund16095 Selenicereus undatus HOM05D014664 ORTHO05D009871 3.1e-07 59.7 116 28.4
Nn1g06738 Nelumbo nucifera HOM05D008666 ORTHO05D009871 5.3e-07 58.9 70 45.7
Oeu008031.1 Olea europaea HOM05D052362 ORTHO05D009871 5.3e-07 58.9 95 40.0
Rhsim04G0017600 Rhododendron simsii HOM05D008666 ORTHO05D009871 5.3e-07 58.9 164 31.7
vmacro09555 Vaccinium macrocarpon HOM05D008666 ORTHO05D009871 5.3e-07 58.9 193 27.5
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 9.0e-07 58.2 116 33.6
Atru.chr2.2827 Acer truncatum HOM05D038199 ORTHO05D009871 7.6e-06 55.1 226 26.5


User provided reference genes

Program Settings