Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g013490.1 Solanum lycopersicum HOM05D030424 ORTHO05D028509 2.4e-100 369.0 210 100.0
Solyc07g021100.1 Solanum lycopersicum HOM05D030424 ORTHO05D028509 1.8e-31 140.2 112 72.3
Nitab4.5_0000990g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 8.4e-29 131.3 137 54.7
Solyc07g021070.1 Solanum lycopersicum HOM05D030424 ORTHO05D028509 6.1e-27 125.2 107 72.9
Nitab4.5_0005902g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.7e-25 118.6 103 59.2
Peaxi162Scf00384g00125 Petunia axillaris HOM05D000007 ORTHO05D000039 3.7e-24 115.9 101 56.4
Nitab4.5_0001267g0120 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.8e-24 115.5 140 45.7
Nitab4.5_0012904g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.8e-23 113.6 141 44.7
CAN.G1320.6 Capsicum annuum HOM05D030424 ORTHO05D028509 1.7e-16 90.5 128 49.2
Nitab4.5_0018863g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.1e-15 84.7 101 45.5
Nitab4.5_0000249g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.0e-13 81.3 101 42.6
Manes.07G068800 Manihot esculenta HOM05D000007 ORTHO05D000039 9.7e-09 64.7 97 38.1
Lj1P674T76 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-07 60.8 87 37.9
SGA_v2.0_scaffold4G02111 Striga asiatica HOM05D000007 ORTHO05D000039 9.1e-07 58.2 85 40.0
Actinidia11170 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.5e-06 57.4 88 36.4
Lj1A671T55 Lonicera japonica HOM05D000007 ORTHO05D000039 2.0e-06 57.0 93 36.6
Lj1P663T62 Lonicera japonica HOM05D000007 ORTHO05D000039 2.0e-06 57.0 112 33.0
QL04p019478 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-06 57.0 94 38.3
QL04p019108 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-06 56.6 104 37.5
Lj1C674T8 Lonicera japonica HOM05D000007 ORTHO05D000039 3.5e-06 56.2 93 36.6
QL04p019437 Quercus lobata HOM05D000007 ORTHO05D000039 3.5e-06 56.2 90 35.6


User provided reference genes

Program Settings