Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 8.8e-156 553.5 267 100.0
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 2.9e-143 511.9 259 96.5
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 1.1e-126 456.8 266 81.6
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 3.1e-121 438.7 261 80.5
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 6.2e-101 371.3 268 71.6
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 6.4e-98 361.3 261 69.7
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 2.1e-80 303.1 173 87.9
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 9.0e-68 261.2 267 48.7
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 3.0e-63 246.1 198 64.6
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 1.9e-62 243.4 241 50.2
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 9.0e-60 234.6 262 43.9
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 1.2e-59 234.2 254 48.4
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 4.9e-58 228.8 265 47.2
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 6.5e-58 228.4 250 45.6
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 8.4e-58 228.0 264 46.2
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 1.1e-57 227.6 248 47.2
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 2.1e-56 223.4 245 49.4
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 1.0e-55 221.1 270 43.3
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 3.0e-55 219.5 255 46.7
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 6.7e-55 218.4 267 44.9
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 9.6e-54 214.5 250 46.0
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 1.6e-53 213.8 284 41.5
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 8.2e-53 211.5 255 44.7
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.4e-52 210.7 183 59.6
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 6.9e-52 208.4 260 43.5
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 6.9e-52 208.4 267 42.3
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 1.3e-50 204.1 265 43.0
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 1.7e-50 203.8 255 41.2
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.7e-50 203.8 254 43.3
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 2.2e-50 203.4 255 44.7
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 3.8e-50 202.6 254 43.3
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 6.5e-50 201.8 268 41.8
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 6.5e-50 201.8 264 41.3
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.1e-49 201.1 267 41.6
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 2.5e-49 199.9 257 42.4
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 3.2e-49 199.5 277 41.9
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 3.2e-49 199.5 260 42.3
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 4.2e-49 199.1 267 41.6
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 1.6e-48 197.2 283 42.0
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 3.9e-47 192.6 259 40.5
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 5.1e-47 192.2 267 39.7
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.1e-46 191.0 265 38.5
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 1.5e-46 190.7 253 43.9
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 2.2e-45 186.8 265 37.4
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 2.0e-43 180.3 261 38.7
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 2.9e-42 176.4 250 39.6
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 3.8e-42 176.0 243 40.3
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 1.1e-41 174.5 246 39.4
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 2.5e-41 173.3 183 47.0
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 1.2e-40 171.0 261 38.3
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 2.7e-40 169.9 237 40.1
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 1.4e-39 167.5 263 38.4
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 2.3e-39 166.8 229 37.1
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 3.0e-39 166.4 240 40.0
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 5.1e-39 165.6 330 31.5
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 1.5e-35 154.1 252 34.5
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 2.2e-34 150.2 266 36.1
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 2.9e-34 149.8 269 35.7
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 5.0e-34 149.1 244 34.4
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 6.5e-34 148.7 257 35.0
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 8.5e-34 148.3 248 37.9
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 2.5e-33 146.7 248 37.1
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 3.2e-33 146.4 252 34.9
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 4.2e-33 146.0 247 39.3
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 4.2e-33 146.0 251 34.7
Nitab4.5_0008862g0010 Nicotiana tabacum HOM05D003067 ORTHO05D009378 7.2e-33 145.2 149 51.0
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 4.7e-32 142.5 255 34.1
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 2.3e-31 140.2 252 36.5
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 5.1e-31 139.0 258 32.6
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 5.1e-31 139.0 258 32.2
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 8.8e-31 138.3 258 32.2
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 8.8e-31 138.3 258 32.2
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 5.7e-30 135.6 261 32.2
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 2.2e-29 133.7 260 36.2
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 2.8e-29 133.3 258 31.4
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 3.1e-28 129.8 196 34.2
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 7.7e-27 125.2 233 37.8
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 2.2e-26 123.6 131 48.1
Nitab4.5_0000273g0210 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.2e-24 117.9 97 62.9
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 4.7e-24 115.9 171 39.2
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 3.0e-23 113.2 159 39.6
Nitab4.5_0002197g0030 Nicotiana tabacum HOM05D003067 ORTHO05D009378 4.8e-21 105.9 184 38.6
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 5.3e-20 102.4 136 41.2
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 6.5e-18 95.5 229 29.7
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 1.1e-17 94.7 236 30.1
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 9.4e-17 91.7 150 32.0
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 5.2e-15 85.9 181 30.4
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 2.6e-14 83.6 66 59.1
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.1e-12 78.2 62 61.3
Sopen11g015440 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-11 73.2 49 79.6
Sopen03g003180 Solanum pennellii HOM05D004956 ORTHO05D006284 5.9e-11 72.4 35 97.1
Sopen11g017880 Solanum pennellii HOM05D004956 ORTHO05D006284 5.9e-11 72.4 35 97.1
Mapoly0029s0107 Marchantia polymorpha HOM05D001297 ORTHO05D001135 5.5e-09 65.9 295 24.7
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 3.4e-06 56.6 113 31.9


User provided reference genes

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