Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g009860.3 Solanum lycopersicum HOM05D008165 ORTHO05D007516 2.5e-42 176.0 135 100.0
Sopen12g004750 Solanum pennellii HOM05D008165 ORTHO05D007516 3.6e-41 172.2 135 97.8
PGSC0003DMG400007836 Solanum tuberosum HOM05D008165 ORTHO05D007516 1.5e-34 150.2 87 95.4
Nitab4.5_0008536g0060 Nicotiana tabacum HOM05D008165 ORTHO05D007516 1.4e-24 117.1 83 77.1
Nitab4.5_0007621g0020 Nicotiana tabacum HOM05D013625 ORTHO05D007516 3.6e-17 92.4 92 59.8
Rhsim03G0252900 Rhododendron simsii HOM05D008165 ORTHO05D007516 3.1e-16 89.4 86 55.8
CAN.G467.3 Capsicum annuum HOM05D013625 ORTHO05D007516 4.0e-16 89.0 104 52.9
Solyc07g007500.3 Solanum lycopersicum HOM05D013625 ORTHO05D007516 8.9e-16 87.8 105 53.3
Sopen07g003520 Solanum pennellii HOM05D013625 ORTHO05D007516 8.9e-16 87.8 105 53.3
Peaxi162Scf00088g00076 Petunia axillaris HOM05D013625 ORTHO05D007516 4.4e-15 85.5 84 58.3
Lj9A703T45 Lonicera japonica HOM05D008165 ORTHO05D007516 9.9e-15 84.3 73 60.3
Migut.J01244 Erythranthe guttata HOM05D008165 ORTHO05D007516 1.6e-12 77.0 88 52.3
Peaxi162Scf01694g00020 Petunia axillaris HOM05D013625 ORTHO05D007516 1.6e-12 77.0 69 66.7
vmacro23527 Vaccinium macrocarpon HOM05D008165 ORTHO05D007516 2.1e-12 76.6 87 50.6
GSVIVG01012854001 Vitis vinifera HOM05D008165 ORTHO05D007516 6.6e-11 71.6 135 52.6
FAN26G1249 Fragaria x ananassa HOM05D008165 ORTHO05D007516 2.5e-10 69.7 70 55.7
QL02p090702 Quercus lobata HOM05D008165 ORTHO05D007516 2.5e-10 69.7 86 51.2
RcHm_v2.0_Chr2g0087101 Rosa chinensis HOM05D008165 ORTHO05D007516 2.5e-10 69.7 70 54.3
HanXRQChr06g0180411 Helianthus annuus HOM05D021640 ORTHO05D007516 3.3e-10 69.3 87 50.6
FAN23G0205 Fragaria x ananassa HOM05D008165 ORTHO05D007516 9.6e-10 67.8 70 54.3
ECA234G1017 Erigeron canadensis HOM05D021640 ORTHO05D007516 3.6e-09 65.9 63 57.1
MD02G1018600 Malus domestica HOM05D008165 ORTHO05D007516 3.6e-09 65.9 70 50.0
Ah.14g079050 Amaranthus hybridus HOM05D008165 ORTHO05D007516 6.2e-09 65.1 74 47.3
Gohir.D05G014200 Gossypium hirsutum HOM05D008165 ORTHO05D007516 6.2e-09 65.1 69 52.2
Oeu058579.1 Olea europaea HOM05D008165 ORTHO05D007516 6.2e-09 65.1 88 48.9
Gohir.A05G013100 Gossypium hirsutum HOM05D008165 ORTHO05D007516 8.1e-09 64.7 67 52.2
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla HOM05D008165 ORTHO05D007516 1.1e-08 64.3 83 44.6
Nn8g39643 Nelumbo nucifera HOM05D008165 ORTHO05D007516 1.1e-08 64.3 85 44.7
Duzib168G0348 Durio zibethinus HOM05D008165 ORTHO05D007516 1.4e-08 63.9 72 50.0
Duzib150G0960 Durio zibethinus HOM05D008165 ORTHO05D007516 1.8e-08 63.5 69 50.7
TAR673G0004 Trochodendron aralioides HOM05D008165 ORTHO05D007516 1.8e-08 63.5 86 44.2
Duzib187G0069 Durio zibethinus HOM05D008165 ORTHO05D007516 2.4e-08 63.2 70 50.0
Thecc.09G137200 Theobroma cacao HOM05D008165 ORTHO05D007516 2.4e-08 63.2 70 51.4
Oeu055936.1 Olea europaea HOM05D008165 ORTHO05D007516 3.1e-08 62.8 84 44.0
MELO3C004479.2 Cucumis melo HOM05D008165 ORTHO05D007516 4.0e-08 62.4 67 50.7
Gorai.009G014200 Gossypium raimondii HOM05D008165 ORTHO05D007516 5.2e-08 62.0 68 50.0
MD15G1162600 Malus domestica HOM05D008165 ORTHO05D007516 8.9e-08 61.2 76 47.4
TAR383G0642 Trochodendron aralioides HOM05D008165 ORTHO05D007516 8.9e-08 61.2 84 44.0
Dinv38142 Davidia involucrata HOM05D008165 ORTHO05D007516 1.5e-07 60.5 86 43.0
FvH4_1g02080 Fragaria vesca HOM05D008165 ORTHO05D007516 1.5e-07 60.5 67 50.7
FAN19G0448 Fragaria x ananassa HOM05D008165 ORTHO05D007516 1.5e-07 60.5 67 50.7
Nitab4.5_0000704g0140 Nicotiana tabacum HOM05D013625 ORTHO05D025947 2.0e-07 60.1 77 50.6
Cc06_g07690 Coffea canephora HOM05D008165 ORTHO05D007516 2.6e-07 59.7 86 46.5
Manes.06G044400 Manihot esculenta HOM05D008165 ORTHO05D007516 2.6e-07 59.7 68 51.5
CiPaw.07G225700 Carya illinoinensis HOM05D009923 ORTHO05D007516 3.4e-07 59.3 82 45.1
Hund21593 Selenicereus undatus HOM05D008165 ORTHO05D007516 3.4e-07 59.3 74 43.2
ClCG11G003470 Citrullus lanatus HOM05D008165 ORTHO05D007516 4.4e-07 58.9 71 47.9
Manes.14G119100 Manihot esculenta HOM05D008165 ORTHO05D007516 7.6e-07 58.2 68 48.5
TAR626G1841 Trochodendron aralioides HOM05D008165 ORTHO05D007516 7.6e-07 58.2 82 43.9
CsaV3_2G003340 Cucumis sativus L. HOM05D008165 ORTHO05D007516 9.9e-07 57.8 70 47.1
THA.LOC104808953 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 1.3e-06 57.4 67 49.3
ClCG11G003490 Citrullus lanatus HOM05D008165 ORTHO05D007516 1.7e-06 57.0 72 44.4
TAR625G0094 Trochodendron aralioides HOM05D008165 ORTHO05D007516 2.2e-06 56.6 79 45.6
HanXRQChr10g0314161 Helianthus annuus HOM05D021640 ORTHO05D007516 8.4e-06 54.7 63 47.6


User provided reference genes

Program Settings