Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 2.1e-104 382.5 210 100.0
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 1.8e-103 379.4 210 99.0
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 1.6e-91 339.7 211 89.1
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 4.7e-88 328.2 222 82.9
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 8.0e-88 327.4 222 82.9
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 3.4e-78 295.4 223 76.2
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.1e-63 247.3 209 64.6
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 4.4e-62 241.9 221 62.9
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 9.9e-62 240.7 213 65.3
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 4.9e-61 238.4 190 65.8
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 4.9e-61 238.4 194 68.0
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 6.4e-61 238.0 234 59.4
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 8.4e-61 237.7 229 62.0
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.9e-60 236.5 193 66.3
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 2.4e-60 236.1 214 66.4
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 7.1e-60 234.6 223 61.4
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 1.2e-59 233.8 225 63.1
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 1.2e-59 233.8 193 65.3
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.6e-59 233.4 219 63.9
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 1.6e-59 233.4 235 59.6
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 2.7e-59 232.6 191 66.0
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 2.7e-59 232.6 193 65.3
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 3.5e-59 232.3 190 64.2
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 4.6e-59 231.9 193 64.8
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 6.0e-59 231.5 194 63.9
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 7.8e-59 231.1 233 57.1
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 1.3e-58 230.3 229 59.4
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 1.3e-58 230.3 191 64.9
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 2.3e-58 229.6 217 63.1
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.3e-58 229.6 228 58.8
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 2.3e-58 229.6 193 64.8
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 3.0e-58 229.2 193 64.8
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 3.0e-58 229.2 231 58.0
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.0e-58 229.2 235 58.3
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.9e-58 228.8 236 57.2
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 6.6e-58 228.0 190 63.7
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 6.6e-58 228.0 193 64.2
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 8.7e-58 227.6 205 61.5
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.1e-57 227.3 217 63.6
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.1e-57 227.3 200 64.5
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 1.1e-57 227.3 218 62.4
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.9e-57 226.5 233 56.2
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 2.5e-57 226.1 220 60.9
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 3.3e-57 225.7 193 62.2
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 4.3e-57 225.3 203 62.1
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 5.6e-57 224.9 232 57.3
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 5.6e-57 224.9 198 62.1
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 9.6e-57 224.2 235 55.7
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.6e-56 223.4 210 64.3
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.1e-56 223.0 211 59.2
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 3.6e-56 222.2 253 52.6
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 6.2e-56 221.5 192 63.0
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.1e-55 220.7 188 64.4
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.1e-55 220.7 186 64.0
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 1.1e-55 220.7 186 64.0
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 1.1e-55 220.7 205 58.5
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 4.0e-55 218.8 217 58.5
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 4.0e-55 218.8 230 57.0
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 9.0e-55 217.6 223 58.3
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.2e-54 217.2 212 60.4
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 1.2e-54 217.2 212 58.5
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.5e-54 216.9 197 62.4
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 5.8e-54 214.9 187 63.6
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 9.9e-54 214.2 206 61.7
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 2.2e-53 213.0 223 56.5
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 4.9e-53 211.8 229 57.2
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 4.9e-53 211.8 226 56.6
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 1.1e-52 210.7 193 61.1
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 3.2e-52 209.1 196 60.2
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 4.2e-52 208.8 245 53.1
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 9.3e-52 207.6 212 58.0
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 2.1e-51 206.5 211 56.4
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 2.1e-51 206.5 194 58.8
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 2.7e-51 206.1 172 66.3
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 3.5e-51 205.7 212 57.1
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.6e-51 205.3 217 55.3
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.0e-51 204.9 200 58.5
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.0e-50 204.1 217 57.1
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 1.3e-50 203.8 200 58.5
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.3e-50 203.8 200 58.5
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 1.7e-50 203.4 174 64.4
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.7e-50 203.4 194 59.3
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.3e-50 203.0 206 55.3
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 3.0e-50 202.6 215 56.3
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 3.9e-50 202.2 176 63.6
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 5.1e-50 201.8 238 52.5
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 5.1e-50 201.8 185 61.1
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 6.6e-50 201.4 200 58.5
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.1e-49 200.7 200 58.0
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.1e-49 200.7 223 53.4
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 2.5e-49 199.5 204 55.9
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 3.3e-49 199.1 217 55.8
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 5.6e-49 198.4 217 55.3
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 7.3e-49 198.0 215 54.9
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 7.3e-49 198.0 215 54.4
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.3e-48 197.2 174 63.2
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.3e-48 197.2 148 70.3
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 6.9e-47 191.4 194 58.2
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.3e-45 187.2 160 64.4
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 3.8e-45 185.7 174 58.0
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.1e-44 184.1 176 60.8
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.4e-44 183.7 181 59.1
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 3.2e-44 182.6 134 70.1
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 3.5e-43 179.1 210 52.9
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.3e-40 170.6 174 58.6
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 8.1e-40 167.9 153 61.4
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.1e-39 167.5 168 53.6
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 9.0e-39 164.5 171 57.3
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 3.3e-33 146.0 154 57.1
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 1.3e-32 144.1 133 58.6
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 1.6e-32 143.7 140 58.6
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 2.1e-32 143.3 208 45.7
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 6.2e-32 141.7 149 55.0
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 9.0e-31 137.9 193 49.2
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 2.9e-29 132.9 128 57.0
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.9e-28 130.2 128 55.5
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 5.5e-28 128.6 177 44.6
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.3e-26 124.0 174 47.1
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 5.7e-25 118.6 190 39.5
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 1.4e-20 104.0 128 46.1
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.6e-19 100.5 106 52.8
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 3.0e-18 96.3 74 66.2
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 3.7e-16 89.4 153 38.6
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.0e-13 79.0 91 50.5
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 1.7e-08 63.9 108 44.4
Cre06.g256250 Chlamydomonas reinhardtii HOM05D006257 ORTHO05D007708 1.1e-07 61.2 156 30.1


User provided reference genes

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